RNA–Protein interactions for RNA: ENSMUST00000095476.5

Lig4-201, Transcript of DNA ligase 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lig4, Length 5,028 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4-201ENSMUST00000095476 Rapgef2Q8CHG7 1496 aa12.67□□□□□ -0.38
Lig4-201ENSMUST00000095476 Sf3a1Q8K4Z5 791 aaKnown RBP12.67□□□□□ -0.38
Lig4-201ENSMUST00000095476 Kif4P33174 1231 aa12.67□□□□□ -0.38
Lig4-201ENSMUST00000095476 Ksr2Q3UVC0 959 aa12.67□□□□□ -0.38
Lig4-201ENSMUST00000095476 Tmco5bQ80X59 307 aa12.67□□□□□ -0.38
Lig4-201ENSMUST00000095476 Znf330Q922H9 316 aa12.66□□□□□ -0.38
Lig4-201ENSMUST00000095476 Fez1Q8K0X8 392 aa12.66□□□□□ -0.38
Lig4-201ENSMUST00000095476 Gtf3c5Q8R2T8 520 aa12.66□□□□□ -0.38
Lig4-201ENSMUST00000095476 Ralbp1Q62172 648 aa12.66□□□□□ -0.38
Lig4-201ENSMUST00000095476 Smarca2Q6DIC0 1577 aa12.65□□□□□ -0.38
Lig4-201ENSMUST00000095476 Cgnl1Q6AW69 1298 aa12.65□□□□□ -0.38
Lig4-201ENSMUST00000095476 Cux2P70298 1426 aa12.65□□□□□ -0.38
Lig4-201ENSMUST00000095476 Map4P27546 1125 aaKnown RBP12.65□□□□□ -0.38
Lig4-201ENSMUST00000095476 St18Q80TY4 1045 aa12.65□□□□□ -0.39
Lig4-201ENSMUST00000095476 Trak1Q6PD31 939 aa12.64□□□□□ -0.39
Lig4-201ENSMUST00000095476 Cnga1P29974 684 aa12.64□□□□□ -0.39
Lig4-201ENSMUST00000095476 R3hcc1Q8BSI6 488 aa12.64□□□□□ -0.39
Lig4-201ENSMUST00000095476 U2af1Q9D883 239 aaKnown RBP12.64□□□□□ -0.39
Lig4-201ENSMUST00000095476 Cabp1Q9JLK7 227 aa12.64□□□□□ -0.39
Lig4-201ENSMUST00000095476 Usp47Q8BY87 1376 aa12.64□□□□□ -0.39
Lig4-201ENSMUST00000095476 Atl3Q91YH5 541 aa12.64□□□□□ -0.39
Lig4-201ENSMUST00000095476 KarsQ99MN1 595 aaKnown RBP12.64□□□□□ -0.39
Lig4-201ENSMUST00000095476 1700019A02RikA0A087WPV9 146 aa12.63□□□□□ -0.39
Lig4-201ENSMUST00000095476 Dusp27Q148W8 1138 aa12.63□□□□□ -0.39
Lig4-201ENSMUST00000095476 Tpd52l1O54818 204 aa12.63□□□□□ -0.39
Lig4-201ENSMUST00000095476 Trim58Q5NCC9 485 aa12.63□□□□□ -0.39
Lig4-201ENSMUST00000095476 Tnpo1Q8BFY9 898 aaKnown RBP12.63□□□□□ -0.39
Lig4-201ENSMUST00000095476 Rrp7aQ9D1C9 280 aaKnown RBP12.63□□□□□ -0.39
Lig4-201ENSMUST00000095476 Dcaf11Q91VU6 549 aa12.63□□□□□ -0.39
Lig4-201ENSMUST00000095476 Mrvi1Q9WUX5 899 aaKnown RBP12.63□□□□□ -0.39
Lig4-201ENSMUST00000095476 Rpap1Q80TE0 1409 aa12.63□□□□□ -0.39
Lig4-201ENSMUST00000095476 Pdia4P08003 638 aaKnown RBP12.63□□□□□ -0.39
Lig4-201ENSMUST00000095476 EzrP26040 586 aaKnown RBP12.63□□□□□ -0.39
Lig4-201ENSMUST00000095476 Aebp1Q640N1 1128 aa12.63□□□□□ -0.39
Lig4-201ENSMUST00000095476 Ifit1bl1D3Z6F0 470 aa12.62□□□□□ -0.39
Lig4-201ENSMUST00000095476 Utp3Q9JI13 469 aaKnown RBP12.62□□□□□ -0.39
Lig4-201ENSMUST00000095476 Tomm22Q9CPQ3 142 aa12.62□□□□□ -0.39
Lig4-201ENSMUST00000095476 Kcnh8P59111 1102 aa12.61□□□□□ -0.39
Lig4-201ENSMUST00000095476 Pnmal2G3X9N3 661 aa12.61□□□□□ -0.39
Lig4-201ENSMUST00000095476 Stag3O70576 1240 aa12.61□□□□□ -0.39
Lig4-201ENSMUST00000095476 Pde3bQ61409 1100 aa12.61□□□□□ -0.39
Lig4-201ENSMUST00000095476 Podxl2Q8CAE9 603 aa12.61□□□□□ -0.39
Lig4-201ENSMUST00000095476 Irx6Q9ER75 438 aa12.6□□□□□ -0.39
Lig4-201ENSMUST00000095476 Esx1O88933 382 aa12.6□□□□□ -0.39
Lig4-201ENSMUST00000095476 Anp32eP97822 260 aaKnown RBP12.6□□□□□ -0.39
Lig4-201ENSMUST00000095476 Filip1lQ6P6L0 1131 aa12.6□□□□□ -0.39
Lig4-201ENSMUST00000095476 Pank3Q8R2W9 370 aa12.6□□□□□ -0.39
Lig4-201ENSMUST00000095476 CftrP26361 1476 aa12.6□□□□□ -0.39
Lig4-201ENSMUST00000095476 UacaQ8CGB3 1411 aa12.6□□□□□ -0.39
Lig4-201ENSMUST00000095476 Kif27Q7M6Z4 1394 aa12.59□□□□□ -0.39
Lig4-201ENSMUST00000095476 Iffo2Q8R2V2 512 aa12.59□□□□□ -0.39
Lig4-201ENSMUST00000095476 Ssh1Q76I79 1042 aa12.59□□□□□ -0.39
Lig4-201ENSMUST00000095476 Gtf2e1Q9D0D5 440 aa12.59□□□□□ -0.39
Lig4-201ENSMUST00000095476 Tpm3P21107 285 aaKnown RBP12.58□□□□□ -0.4
Lig4-201ENSMUST00000095476 Rpgrip1lQ8CG73 1264 aa12.58□□□□□ -0.4
Lig4-201ENSMUST00000095476 Ccdc146E9Q9F7 977 aa12.58□□□□□ -0.4
Lig4-201ENSMUST00000095476 Slc4a1apE9PX68 744 aa12.58□□□□□ -0.4
Lig4-201ENSMUST00000095476 Ppp2r3aB2RXC8 1150 aa12.57□□□□□ -0.4
Lig4-201ENSMUST00000095476 Liat1Q810M6 228 aa12.57□□□□□ -0.4
Lig4-201ENSMUST00000095476 Eif4g2Q62448 906 aaKnown RBP12.57□□□□□ -0.4
Lig4-201ENSMUST00000095476 Ncapd3Q6ZQK0 1506 aa12.57□□□□□ -0.4
Lig4-201ENSMUST00000095476 Plekhh1Q80TI1 1356 aa12.57□□□□□ -0.4
Lig4-201ENSMUST00000095476 Cc2d2aQ8CFW7 1633 aa12.57□□□□□ -0.4
Lig4-201ENSMUST00000095476 Rnf214Q8BFU3 668 aaKnown RBP12.57□□□□□ -0.4
Lig4-201ENSMUST00000095476 Sptbn5F6UCX4 1208 aa12.56□□□□□ -0.4
Lig4-201ENSMUST00000095476 Zfp444Q3TDV8 331 aaKnown RBP12.56□□□□□ -0.4
Lig4-201ENSMUST00000095476 Sh3bp5Q9Z131 463 aa12.56□□□□□ -0.4
Lig4-201ENSMUST00000095476 CrebrfQ8CDG5 640 aaKnown RBP12.56□□□□□ -0.4
Lig4-201ENSMUST00000095476 U2surpQ6NV83 1029 aaKnown RBP12.56□□□□□ -0.4
Lig4-201ENSMUST00000095476 Znf771Q8BJ90 317 aa12.56□□□□□ -0.4
Lig4-201ENSMUST00000095476 Zfp777B9EKF4 885 aa12.55□□□□□ -0.4
Lig4-201ENSMUST00000095476 Dixdc1Q80Y83 711 aa12.55□□□□□ -0.4
Lig4-201ENSMUST00000095476 Srcin1Q9QWI6 1250 aa12.55□□□□□ -0.4
Lig4-201ENSMUST00000095476 Dapk1Q80YE7 1442 aa12.55□□□□□ -0.4
Lig4-201ENSMUST00000095476 Ccdc34Q3UI66 367 aa12.55□□□□□ -0.4
Lig4-201ENSMUST00000095476 Inpp5dQ9ES52 1191 aa12.55□□□□□ -0.4
Lig4-201ENSMUST00000095476 Cwc15Q9JHS9 229 aaKnown RBP12.54□□□□□ -0.4
Lig4-201ENSMUST00000095476 Samd1D3YXK1 519 aa12.54□□□□□ -0.4
Lig4-201ENSMUST00000095476 Ccdc30Q8BVF4 654 aa12.54□□□□□ -0.4
Lig4-201ENSMUST00000095476 Nap1l3Q794H2 544 aa12.54□□□□□ -0.4
Lig4-201ENSMUST00000095476 Hmgn5Q9JL35 406 aa12.54□□□□□ -0.4
Lig4-201ENSMUST00000095476 Stk24Q99KH8 431 aa12.53□□□□□ -0.4
Lig4-201ENSMUST00000095476 Sh3bgrQ9WUZ7 214 aa12.53□□□□□ -0.4
Lig4-201ENSMUST00000095476 Cdkn1cP49919 348 aa12.53□□□□□ -0.4
Lig4-201ENSMUST00000095476 Arhgap27A2AB59 869 aa12.52□□□□□ -0.4
Lig4-201ENSMUST00000095476 Rassf8Q8CJ96 419 aa12.52□□□□□ -0.41
Lig4-201ENSMUST00000095476 Pank1Q8K4K6 548 aa12.52□□□□□ -0.41
Lig4-201ENSMUST00000095476 Mcm4P49717 862 aa12.51□□□□□ -0.41
Lig4-201ENSMUST00000095476 NcapgE9PWG6 1004 aa12.51□□□□□ -0.41
Lig4-201ENSMUST00000095476 CalrP14211 416 aaKnown RBP12.51□□□□□ -0.41
Lig4-201ENSMUST00000095476 KinQ8K339 391 aa12.51□□□□□ -0.41
Lig4-201ENSMUST00000095476 Gse1Q3U3C9 1213 aa12.5□□□□□ -0.41
Lig4-201ENSMUST00000095476 Ccdc60Q8C4J0 545 aa12.5□□□□□ -0.41
Lig4-201ENSMUST00000095476 MecomP14404 1042 aa12.5□□□□□ -0.41
Lig4-201ENSMUST00000095476 Anapc15P60007 132 aa12.5□□□□□ -0.41
Lig4-201ENSMUST00000095476 Zscan10Q3URR7 782 aa12.5□□□□□ -0.41
Lig4-201ENSMUST00000095476 1700010I14RikQ7TPG0 532 aa12.5□□□□□ -0.41
Lig4-201ENSMUST00000095476 Frmpd1A2AKB4 1549 aa12.49□□□□□ -0.41
Lig4-201ENSMUST00000095476 L3mbtl2P59178 703 aa12.49□□□□□ -0.41
Lig4-201ENSMUST00000095476 Tpm3-rs7D3Z2H9 248 aa12.49□□□□□ -0.41
Retrieved 100 of 22,080 RNA–protein pairs in 15.7 ms