RNA–Protein interactions for RNA: ENSMUST00000080461.11

Lig3-202, Transcript of DNA ligase 3, mousemouse

TSL 5 BASIC

Gene Lig3, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-202ENSMUST00000080461 Nos1Q9Z0J4 1429 aa17.64■□□□□ 0.42
Lig3-202ENSMUST00000080461 Clasp1Q80TV8 1535 aaKnown RBP17.64■□□□□ 0.41
Lig3-202ENSMUST00000080461 Sin3aQ60520 1274 aaKnown RBP17.64■□□□□ 0.41
Lig3-202ENSMUST00000080461 AglF8VPN4 1532 aa17.63■□□□□ 0.41
Lig3-202ENSMUST00000080461 Robo2Q7TPD3 1470 aa17.62■□□□□ 0.41
Lig3-202ENSMUST00000080461 Usp54Q8BL06 1588 aaKnown RBP17.62■□□□□ 0.41
Lig3-202ENSMUST00000080461 Kdm5cP41230 1554 aa17.62■□□□□ 0.41
Lig3-202ENSMUST00000080461 Kif14L0N7N1 1674 aaKnown RBP17.61■□□□□ 0.41
Lig3-202ENSMUST00000080461 ShprhQ7TPQ3 1674 aa17.61■□□□□ 0.41
Lig3-202ENSMUST00000080461 OvosQ3UU35 1456 aa17.61■□□□□ 0.41
Lig3-202ENSMUST00000080461 Kif1bQ60575 1816 aaKnown RBP17.6■□□□□ 0.41
Lig3-202ENSMUST00000080461 Kiaa0556Q8C753 1610 aa17.59■□□□□ 0.41
Lig3-202ENSMUST00000080461 Cd109Q8R422 1442 aa17.58■□□□□ 0.4
Lig3-202ENSMUST00000080461 Atp10aO54827 1508 aa17.58■□□□□ 0.4
Lig3-202ENSMUST00000080461 Gm13697A2AK42 830 aa17.57■□□□□ 0.4
Lig3-202ENSMUST00000080461 Pde4cQ3UEI1 686 aa17.57■□□□□ 0.4
Lig3-202ENSMUST00000080461 Depdc5P61460 1591 aa17.57■□□□□ 0.4
Lig3-202ENSMUST00000080461 Znf518aB2RRF6 1478 aaKnown RBP17.57■□□□□ 0.4
Lig3-202ENSMUST00000080461 Dot1lQ6XZL8 1540 aa17.56■□□□□ 0.4
Lig3-202ENSMUST00000080461 Myo5cE9Q1F5 1742 aa17.55■□□□□ 0.4
Lig3-202ENSMUST00000080461 Ttc37F8VPK0 1563 aa17.55■□□□□ 0.4
Lig3-202ENSMUST00000080461 Atp7aQ64430 1491 aa17.54■□□□□ 0.4
Lig3-202ENSMUST00000080461 Rock1P70335 1354 aa17.52■□□□□ 0.4
Lig3-202ENSMUST00000080461 Myom3A2ABU4 1439 aa17.51■□□□□ 0.39
Lig3-202ENSMUST00000080461 Mbd5B1AYB6 1498 aa17.51■□□□□ 0.39
Lig3-202ENSMUST00000080461 Plch2A2AP18 1501 aa17.51■□□□□ 0.39
Lig3-202ENSMUST00000080461 Topbp1Q6ZQF0 1515 aa17.51■□□□□ 0.39
Lig3-202ENSMUST00000080461 Ppip5k1A2ARP1 1436 aa17.5■□□□□ 0.39
Lig3-202ENSMUST00000080461 Nsd2Q8BVE8 1365 aa17.5■□□□□ 0.39
Lig3-202ENSMUST00000080461 Fndc1E9Q043 1732 aa17.49■□□□□ 0.39
Lig3-202ENSMUST00000080461 Kif3bQ61771 747 aa17.49■□□□□ 0.39
Lig3-202ENSMUST00000080461 Cdc42bpgQ80UW5 1551 aa17.49■□□□□ 0.39
Lig3-202ENSMUST00000080461 Ptch1Q61115 1434 aa17.48■□□□□ 0.39
Lig3-202ENSMUST00000080461 Hnrnpul2Q00PI9 745 aaKnown RBP17.48■□□□□ 0.39
Lig3-202ENSMUST00000080461 Rgl3Q3UYI5 709 aa17.48■□□□□ 0.39
Lig3-202ENSMUST00000080461 Tarbp1E9Q368 1579 aa17.47■□□□□ 0.39
Lig3-202ENSMUST00000080461 RereQ80TZ9 1558 aa17.47■□□□□ 0.39
Lig3-202ENSMUST00000080461 Ppp1r18Q8BQ30 594 aa17.47■□□□□ 0.39
Lig3-202ENSMUST00000080461 Dip2cE9PWR4 1557 aa17.47■□□□□ 0.39
Lig3-202ENSMUST00000080461 Ylpm1Q9R0I7 1386 aaKnown RBP17.46■□□□□ 0.39
Lig3-202ENSMUST00000080461 Edc4Q3UJB9 1406 aaKnown RBP17.45■□□□□ 0.38
Lig3-202ENSMUST00000080461 Tmem131lQ3U3D7 1597 aa17.44■□□□□ 0.38
Lig3-202ENSMUST00000080461 Iqgap1Q9JKF1 1657 aaKnown RBP17.44■□□□□ 0.38
Lig3-202ENSMUST00000080461 Uggt2E9Q4X2 1504 aa17.44■□□□□ 0.38
Lig3-202ENSMUST00000080461 Cul9Q80TT8 1865 aa17.44■□□□□ 0.38
Lig3-202ENSMUST00000080461 Gli2Q0VGT2 1544 aa17.44■□□□□ 0.38
Lig3-202ENSMUST00000080461 Hdac5Q9Z2V6 1113 aa17.44■□□□□ 0.38
Lig3-202ENSMUST00000080461 Abca6Q8K441 1624 aa17.43■□□□□ 0.38
Lig3-202ENSMUST00000080461 Mug2P28666 1451 aa17.43■□□□□ 0.38
Lig3-202ENSMUST00000080461 AdgbG3UZ78 1657 aa17.42■□□□□ 0.38
Lig3-202ENSMUST00000080461 Cpsf1Q9EPU4 1441 aaKnown RBP17.42■□□□□ 0.38
Lig3-202ENSMUST00000080461 AnkarA2RT91 1465 aa17.42■□□□□ 0.38
Lig3-202ENSMUST00000080461 Naip6Q9JIB6 1403 aa17.42■□□□□ 0.38
Lig3-202ENSMUST00000080461 Washc2Q6PGL7 1334 aa17.41■□□□□ 0.38
Lig3-202ENSMUST00000080461 Synj2Q9D2G5 1434 aa17.41■□□□□ 0.38
Lig3-202ENSMUST00000080461 Prex1Q69ZK0 1650 aa17.4■□□□□ 0.38
Lig3-202ENSMUST00000080461 Hecw2Q6I6G8 1578 aa17.4■□□□□ 0.38
Lig3-202ENSMUST00000080461 Polr3aB2RXC6 1390 aa17.39■□□□□ 0.38
Lig3-202ENSMUST00000080461 Trpm1Q2TV84 1622 aa17.39■□□□□ 0.37
Lig3-202ENSMUST00000080461 Dapk1Q80YE7 1442 aa17.38■□□□□ 0.37
Lig3-202ENSMUST00000080461 Ttc21bQ0HA38 1315 aa17.38■□□□□ 0.37
Lig3-202ENSMUST00000080461 Ttbk1Q6PCN3 1308 aa17.38■□□□□ 0.37
Lig3-202ENSMUST00000080461 Grwd1Q810D6 446 aaKnown RBP17.37■□□□□ 0.37
Lig3-202ENSMUST00000080461 Anks4bQ8K3X6 423 aa17.36■□□□□ 0.37
Lig3-202ENSMUST00000080461 Yeats2Q3TUF7 1407 aa17.36■□□□□ 0.37
Lig3-202ENSMUST00000080461 Cdk13Q69ZA1 1511 aaKnown RBP17.35■□□□□ 0.37
Lig3-202ENSMUST00000080461 Iqgap3F8VQ29 1632 aa17.35■□□□□ 0.37
Lig3-202ENSMUST00000080461 Ncoa1P70365 1447 aa17.34■□□□□ 0.37
Lig3-202ENSMUST00000080461 Adamts13Q769J6 1426 aa17.34■□□□□ 0.37
Lig3-202ENSMUST00000080461 RalgapbQ8BQZ4 1484 aa17.33■□□□□ 0.36
Lig3-202ENSMUST00000080461 Zbtb4Q5F293 982 aa17.32■□□□□ 0.36
Lig3-202ENSMUST00000080461 Rundc1Q0VDN7 615 aa17.32■□□□□ 0.36
Lig3-202ENSMUST00000080461 Slc24a1Q91WD8 1130 aa17.31■□□□□ 0.36
Lig3-202ENSMUST00000080461 Akap12Q9WTQ5 1684 aa17.31■□□□□ 0.36
Lig3-202ENSMUST00000080461 Abca8aQ8K442 1620 aa17.29■□□□□ 0.36
Lig3-202ENSMUST00000080461 Tulp4Q9JIL5 1547 aa17.29■□□□□ 0.36
Lig3-202ENSMUST00000080461 Cwc22Q8C5N3 908 aaKnown RBP17.29■□□□□ 0.36
Lig3-202ENSMUST00000080461 Abcc6Q9R1S7 1498 aa17.29■□□□□ 0.36
Lig3-202ENSMUST00000080461 Mroh3A0A1D5RM54 893 aa17.28■□□□□ 0.36
Lig3-202ENSMUST00000080461 Csrnp3P59055 597 aa17.28■□□□□ 0.36
Lig3-202ENSMUST00000080461 Card11Q8CIS0 1159 aa17.28■□□□□ 0.36
Lig3-202ENSMUST00000080461 Zmym4A2A791 1549 aaKnown RBP17.27■□□□□ 0.36
Lig3-202ENSMUST00000080461 Cfap65Q3V0B4 1847 aa17.27■□□□□ 0.36
Lig3-202ENSMUST00000080461 Adamts7Q68SA9 1657 aa17.27■□□□□ 0.35
Lig3-202ENSMUST00000080461 Prdm2A2A7B5 1709 aaKnown RBP17.27■□□□□ 0.35
Lig3-202ENSMUST00000080461 Tecpr2Q3UH45 1423 aa17.27■□□□□ 0.35
Lig3-202ENSMUST00000080461 Erich6D3Z6S9 713 aa17.26■□□□□ 0.35
Lig3-202ENSMUST00000080461 ErbinQ80TH2 1402 aa17.25■□□□□ 0.35
Lig3-202ENSMUST00000080461 Ino80Q6ZPV2 1559 aa17.25■□□□□ 0.35
Lig3-202ENSMUST00000080461 Ifit1bl1D3Z6F0 470 aa17.24■□□□□ 0.35
Lig3-202ENSMUST00000080461 Talpid3E9PV87 1520 aa17.24■□□□□ 0.35
Lig3-202ENSMUST00000080461 Adgrb3Q80ZF8 1522 aa17.24■□□□□ 0.35
Lig3-202ENSMUST00000080461 Ehbp1l1Q99MS7 1716 aa17.24■□□□□ 0.35
Lig3-202ENSMUST00000080461 Sall3Q62255 1320 aa17.23■□□□□ 0.35
Lig3-202ENSMUST00000080461 Efcab6Q6P1E8 1516 aa17.22■□□□□ 0.35
Lig3-202ENSMUST00000080461 AatkQ80YE4 1365 aa17.2■□□□□ 0.34
Lig3-202ENSMUST00000080461 Plekhg5Q66T02 1073 aa17.19■□□□□ 0.34
Lig3-202ENSMUST00000080461 NpatQ8BMA5 1420 aa17.19■□□□□ 0.34
Lig3-202ENSMUST00000080461 Knl1Q66JQ7 1612 aa17.19■□□□□ 0.34
Lig3-202ENSMUST00000080461 Rock2P70336 1388 aa17.19■□□□□ 0.34
Retrieved 100 of 22,080 RNA–protein pairs in 19.2 ms