RNA–Protein interactions for RNA: ENSMUST00000050178.12

Ccdc60-201, Transcript of Coiled-coil domain-containing protein 60, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc60, Length 3,522 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60-201ENSMUST00000050178 Adamtsl3G3UXC7 1706 aa11.49□□□□□ -0.57
Ccdc60-201ENSMUST00000050178 Kif1bQ60575 1816 aaKnown RBP11.49□□□□□ -0.57
Ccdc60-201ENSMUST00000050178 Trappc8E9PWG2 1437 aa11.48□□□□□ -0.57
Ccdc60-201ENSMUST00000050178 Naip6Q9JIB6 1403 aa11.47□□□□□ -0.57
Ccdc60-201ENSMUST00000050178 Usp47Q8BY87 1376 aa11.47□□□□□ -0.57
Ccdc60-201ENSMUST00000050178 Atp10dQ8K2X1 1416 aa11.47□□□□□ -0.57
Ccdc60-201ENSMUST00000050178 Mug2P28666 1451 aa11.47□□□□□ -0.57
Ccdc60-201ENSMUST00000050178 Neurod1Q60867 357 aa11.47□□□□□ -0.57
Ccdc60-201ENSMUST00000050178 Uggt2E9Q4X2 1504 aa11.46□□□□□ -0.57
Ccdc60-201ENSMUST00000050178 RereQ80TZ9 1558 aa11.46□□□□□ -0.57
Ccdc60-201ENSMUST00000050178 Usp54Q8BL06 1588 aaKnown RBP11.46□□□□□ -0.57
Ccdc60-201ENSMUST00000050178 Zfp644E9QA22 1323 aa11.45□□□□□ -0.58
Ccdc60-201ENSMUST00000050178 Akap12Q9WTQ5 1684 aa11.45□□□□□ -0.58
Ccdc60-201ENSMUST00000050178 AknaQ80VW7 1404 aa11.45□□□□□ -0.58
Ccdc60-201ENSMUST00000050178 Nos1Q9Z0J4 1429 aa11.45□□□□□ -0.58
Ccdc60-201ENSMUST00000050178 Adamts13Q769J6 1426 aa11.45□□□□□ -0.58
Ccdc60-201ENSMUST00000050178 Abca8aQ8K442 1620 aa11.44□□□□□ -0.58
Ccdc60-201ENSMUST00000050178 RalgapbQ8BQZ4 1484 aa11.44□□□□□ -0.58
Ccdc60-201ENSMUST00000050178 Ttll5Q8CHB8 1328 aa11.44□□□□□ -0.58
Ccdc60-201ENSMUST00000050178 Chic2Q9D9G3 165 aa11.43□□□□□ -0.58
Ccdc60-201ENSMUST00000050178 Tarbp1E9Q368 1579 aa11.43□□□□□ -0.58
Ccdc60-201ENSMUST00000050178 Anks4bQ8K3X6 423 aa11.42□□□□□ -0.58
Ccdc60-201ENSMUST00000050178 Plch2A2AP18 1501 aa11.42□□□□□ -0.58
Ccdc60-201ENSMUST00000050178 Sipa1l1Q8C0T5 1782 aa11.41□□□□□ -0.58
Ccdc60-201ENSMUST00000050178 Gm156Q58A37 223 aa11.41□□□□□ -0.58
Ccdc60-201ENSMUST00000050178 Pkd2O35245 966 aa11.4□□□□□ -0.58
Ccdc60-201ENSMUST00000050178 Iqgap3F8VQ29 1632 aa11.4□□□□□ -0.58
Ccdc60-201ENSMUST00000050178 Depdc5P61460 1591 aa11.4□□□□□ -0.59
Ccdc60-201ENSMUST00000050178 Cdc42bpgQ80UW5 1551 aa11.4□□□□□ -0.59
Ccdc60-201ENSMUST00000050178 Cdk13Q69ZA1 1511 aaKnown RBP11.39□□□□□ -0.59
Ccdc60-201ENSMUST00000050178 AnkarA2RT91 1465 aa11.39□□□□□ -0.59
Ccdc60-201ENSMUST00000050178 Polr3aB2RXC6 1390 aa11.39□□□□□ -0.59
Ccdc60-201ENSMUST00000050178 Dhx9O70133 1380 aaKnown RBP11.39□□□□□ -0.59
Ccdc60-201ENSMUST00000050178 NclP09405 707 aaKnown RBP11.39□□□□□ -0.59
Ccdc60-201ENSMUST00000050178 Atp10aO54827 1508 aa11.39□□□□□ -0.59
Ccdc60-201ENSMUST00000050178 Ehbp1l1Q99MS7 1716 aa11.38□□□□□ -0.59
Ccdc60-201ENSMUST00000050178 Nup155Q99P88 1391 aaKnown RBP11.38□□□□□ -0.59
Ccdc60-201ENSMUST00000050178 Prdm16A2A935 1275 aa11.38□□□□□ -0.59
Ccdc60-201ENSMUST00000050178 Prex1Q69ZK0 1650 aa11.37□□□□□ -0.59
Ccdc60-201ENSMUST00000050178 Atp7aQ64430 1491 aa11.37□□□□□ -0.59
Ccdc60-201ENSMUST00000050178 Wdr66E9Q743 1299 aa11.36□□□□□ -0.59
Ccdc60-201ENSMUST00000050178 Ino80Q6ZPV2 1559 aa11.36□□□□□ -0.59
Ccdc60-201ENSMUST00000050178 Cep152A2AUM9 1736 aaKnown RBP11.36□□□□□ -0.59
Ccdc60-201ENSMUST00000050178 Edc4Q3UJB9 1406 aaKnown RBP11.36□□□□□ -0.59
Ccdc60-201ENSMUST00000050178 Znf518aB2RRF6 1478 aaKnown RBP11.36□□□□□ -0.59
Ccdc60-201ENSMUST00000050178 Pola1P33609 1465 aa11.36□□□□□ -0.59
Ccdc60-201ENSMUST00000050178 Tecpr2Q3UH45 1423 aa11.36□□□□□ -0.59
Ccdc60-201ENSMUST00000050178 Myom3A2ABU4 1439 aa11.35□□□□□ -0.59
Ccdc60-201ENSMUST00000050178 Abca6Q8K441 1624 aa11.35□□□□□ -0.59
Ccdc60-201ENSMUST00000050178 Ppargc1bQ8VHJ7 1014 aa11.35□□□□□ -0.59
Ccdc60-201ENSMUST00000050178 Lmtk3Q5XJV6 1424 aa11.35□□□□□ -0.59
Ccdc60-201ENSMUST00000050178 Ift172Q6VH22 1749 aa11.35□□□□□ -0.59
Ccdc60-201ENSMUST00000050178 Tulp4Q9JIL5 1547 aa11.34□□□□□ -0.59
Ccdc60-201ENSMUST00000050178 Smg6P61406 1418 aaKnown RBP11.34□□□□□ -0.59
Ccdc60-201ENSMUST00000050178 Plekhg5Q66T02 1073 aa11.34□□□□□ -0.59
Ccdc60-201ENSMUST00000050178 Synj2Q9D2G5 1434 aa11.33□□□□□ -0.6
Ccdc60-201ENSMUST00000050178 Adamts7Q68SA9 1657 aa11.33□□□□□ -0.6
Ccdc60-201ENSMUST00000050178 Cdk5rap2Q8K389 1822 aa11.33□□□□□ -0.6
Ccdc60-201ENSMUST00000050178 DnmbpQ6TXD4 1580 aa11.33□□□□□ -0.6
Ccdc60-201ENSMUST00000050178 Nop58Q6DFW4 536 aaKnown RBP11.31□□□□□ -0.6
Ccdc60-201ENSMUST00000050178 Cfap65Q3V0B4 1847 aa11.31□□□□□ -0.6
Ccdc60-201ENSMUST00000050178 Itsn2Q9Z0R6 1659 aa11.31□□□□□ -0.6
Ccdc60-201ENSMUST00000050178 Adgrb3Q80ZF8 1522 aa11.3□□□□□ -0.6
Ccdc60-201ENSMUST00000050178 RictorQ6QI06 1708 aa11.3□□□□□ -0.6
Ccdc60-201ENSMUST00000050178 Cd109Q8R422 1442 aa11.3□□□□□ -0.6
Ccdc60-201ENSMUST00000050178 Brwd3A2AHJ4 1799 aa11.29□□□□□ -0.6
Ccdc60-201ENSMUST00000050178 Myom1Q62234 1667 aaKnown RBP11.29□□□□□ -0.6
Ccdc60-201ENSMUST00000050178 Uggt1Q6P5E4 1551 aa11.29□□□□□ -0.6
Ccdc60-201ENSMUST00000050178 Dapk1Q80YE7 1442 aa11.29□□□□□ -0.6
Ccdc60-201ENSMUST00000050178 Bcl9Q9D219 1425 aa11.29□□□□□ -0.6
Ccdc60-201ENSMUST00000050178 Efcab6Q6P1E8 1516 aa11.28□□□□□ -0.6
Ccdc60-201ENSMUST00000050178 Rims1Q99NE5 1463 aa11.28□□□□□ -0.6
Ccdc60-201ENSMUST00000050178 Plxnc1Q9QZC2 1574 aa11.27□□□□□ -0.6
Ccdc60-201ENSMUST00000050178 Ylpm1Q9R0I7 1386 aaKnown RBP11.27□□□□□ -0.6
Ccdc60-201ENSMUST00000050178 Dip2cE9PWR4 1557 aa11.26□□□□□ -0.61
Ccdc60-201ENSMUST00000050178 Sart1Q9Z315 806 aaKnown RBP11.26□□□□□ -0.61
Ccdc60-201ENSMUST00000050178 Rock2P70336 1388 aa11.26□□□□□ -0.61
Ccdc60-201ENSMUST00000050178 Myom2Q14BI5 1463 aa11.26□□□□□ -0.61
Ccdc60-201ENSMUST00000050178 Washc2Q6PGL7 1334 aa11.25□□□□□ -0.61
Ccdc60-201ENSMUST00000050178 Map4P27546 1125 aaKnown RBP11.25□□□□□ -0.61
Ccdc60-201ENSMUST00000050178 Clstn2Q9ER65 966 aa11.24□□□□□ -0.61
Ccdc60-201ENSMUST00000050178 Abcc6Q9R1S7 1498 aa11.24□□□□□ -0.61
Ccdc60-201ENSMUST00000050178 Nsd2Q8BVE8 1365 aa11.24□□□□□ -0.61
Ccdc60-201ENSMUST00000050178 Trak1Q6PD31 939 aa11.24□□□□□ -0.61
Ccdc60-201ENSMUST00000050178 Dip2bQ3UH60 1574 aa11.24□□□□□ -0.61
Ccdc60-201ENSMUST00000050178 Knl1Q66JQ7 1612 aa11.23□□□□□ -0.61
Ccdc60-201ENSMUST00000050178 Spag9Q58A65 1321 aaKnown RBP11.22□□□□□ -0.61
Ccdc60-201ENSMUST00000050178 Znf710Q3U288 666 aa11.22□□□□□ -0.61
Ccdc60-201ENSMUST00000050178 Cwc22Q8C5N3 908 aaKnown RBP11.22□□□□□ -0.61
Ccdc60-201ENSMUST00000050178 MaddQ80U28 1577 aa11.21□□□□□ -0.62
Ccdc60-201ENSMUST00000050178 Qser1A2BIE1 1698 aa11.21□□□□□ -0.62
Ccdc60-201ENSMUST00000050178 Sin3aQ60520 1274 aaKnown RBP11.21□□□□□ -0.62
Ccdc60-201ENSMUST00000050178 Mroh1E0CZ22 1640 aa11.2□□□□□ -0.62
Ccdc60-201ENSMUST00000050178 Sbno1Q689Z5 1390 aa11.2□□□□□ -0.62
Ccdc60-201ENSMUST00000050178 OvosQ3UU35 1456 aa11.19□□□□□ -0.62
Ccdc60-201ENSMUST00000050178 Gm13695A2AK44 830 aa11.19□□□□□ -0.62
Ccdc60-201ENSMUST00000050178 Gli2Q0VGT2 1544 aa11.18□□□□□ -0.62
Ccdc60-201ENSMUST00000050178 Pde4cQ3UEI1 686 aa11.18□□□□□ -0.62
Ccdc60-201ENSMUST00000050178 Phlpp1Q8CHE4 1687 aa11.17□□□□□ -0.62
Ccdc60-201ENSMUST00000050178 Iqsec2Q5DU25 1478 aa11.16□□□□□ -0.62
Retrieved 100 of 22,080 RNA–protein pairs in 29.7 ms