RNA–Protein interactions for RNA: ENSMUST00000038665.5

Ptchd1-201, Transcript of Patched domain-containing protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptchd1, Length 2,768 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd1-201ENSMUST00000038665 Card11Q8CIS0 1159 aa11.76□□□□□ -0.53
Ptchd1-201ENSMUST00000038665 Adgrl2Q8JZZ7 1487 aa11.76□□□□□ -0.53
Ptchd1-201ENSMUST00000038665 1700123L14RikQ3V2K7 440 aa11.75□□□□□ -0.53
Ptchd1-201ENSMUST00000038665 Sall3Q62255 1320 aa11.75□□□□□ -0.53
Ptchd1-201ENSMUST00000038665 Gapvd1Q6PAR5 1458 aa11.74□□□□□ -0.53
Ptchd1-201ENSMUST00000038665 Pde4cQ3UEI1 686 aa11.74□□□□□ -0.53
Ptchd1-201ENSMUST00000038665 Abcc3B2RX12 1523 aa11.74□□□□□ -0.53
Ptchd1-201ENSMUST00000038665 Kidins220E9Q9B7 1793 aa11.74□□□□□ -0.53
Ptchd1-201ENSMUST00000038665 Tarbp1E9Q368 1579 aa11.73□□□□□ -0.53
Ptchd1-201ENSMUST00000038665 Znf710Q3U288 666 aa11.73□□□□□ -0.53
Ptchd1-201ENSMUST00000038665 Mrs2Q5NCE8 434 aa11.73□□□□□ -0.53
Ptchd1-201ENSMUST00000038665 PtprgQ05909 1442 aa11.73□□□□□ -0.53
Ptchd1-201ENSMUST00000038665 AI481877A2ALV5 1481 aa11.73□□□□□ -0.53
Ptchd1-201ENSMUST00000038665 Exoc6Q8R313 802 aa11.73□□□□□ -0.53
Ptchd1-201ENSMUST00000038665 Myom3A2ABU4 1439 aa11.71□□□□□ -0.53
Ptchd1-201ENSMUST00000038665 Ifit1bl1D3Z6F0 470 aa11.71□□□□□ -0.53
Ptchd1-201ENSMUST00000038665 Kif3bQ61771 747 aa11.71□□□□□ -0.54
Ptchd1-201ENSMUST00000038665 Cfap74Q3UY96 1578 aa11.71□□□□□ -0.54
Ptchd1-201ENSMUST00000038665 Mast1Q9R1L5 1570 aa11.7□□□□□ -0.54
Ptchd1-201ENSMUST00000038665 Zfyve16Q80U44 1528 aa11.7□□□□□ -0.54
Ptchd1-201ENSMUST00000038665 Usp54Q8BL06 1588 aaKnown RBP11.69□□□□□ -0.54
Ptchd1-201ENSMUST00000038665 Pdcd11Q6NS46 1862 aaKnown RBP11.69□□□□□ -0.54
Ptchd1-201ENSMUST00000038665 Kiaa1210E9Q0C6 1637 aa11.69□□□□□ -0.54
Ptchd1-201ENSMUST00000038665 Xrn1P97789 1719 aaKnown RBP11.69□□□□□ -0.54
Ptchd1-201ENSMUST00000038665 Naip6Q9JIB6 1403 aa11.68□□□□□ -0.54
Ptchd1-201ENSMUST00000038665 Abca9Q8K449 1623 aa11.68□□□□□ -0.54
Ptchd1-201ENSMUST00000038665 Slc4a2P13808 1237 aaKnown RBP11.68□□□□□ -0.54
Ptchd1-201ENSMUST00000038665 Pabpn1Q8CCS6 302 aaKnown RBP11.67□□□□□ -0.54
Ptchd1-201ENSMUST00000038665 Clstn2Q9ER65 966 aa11.67□□□□□ -0.54
Ptchd1-201ENSMUST00000038665 Igf1rQ60751 1373 aa11.66□□□□□ -0.54
Ptchd1-201ENSMUST00000038665 Kdm2aP59997 1161 aa11.66□□□□□ -0.54
Ptchd1-201ENSMUST00000038665 Eif5bQ05D44 1216 aaKnown RBP11.66□□□□□ -0.54
Ptchd1-201ENSMUST00000038665 ShprhQ7TPQ3 1674 aa11.65□□□□□ -0.54
Ptchd1-201ENSMUST00000038665 Cep170Q6A065 1588 aa11.65□□□□□ -0.54
Ptchd1-201ENSMUST00000038665 RalgapbQ8BQZ4 1484 aa11.65□□□□□ -0.54
Ptchd1-201ENSMUST00000038665 Hecw1Q8K4P8 1604 aa11.65□□□□□ -0.54
Ptchd1-201ENSMUST00000038665 Lemd3Q9WU40 921 aa11.65□□□□□ -0.54
Ptchd1-201ENSMUST00000038665 Mroh3A0A1D5RM54 893 aa11.64□□□□□ -0.55
Ptchd1-201ENSMUST00000038665 Stk24Q99KH8 431 aa11.64□□□□□ -0.55
Ptchd1-201ENSMUST00000038665 Iqgap1Q9JKF1 1657 aaKnown RBP11.64□□□□□ -0.55
Ptchd1-201ENSMUST00000038665 Prdm16A2A935 1275 aa11.64□□□□□ -0.55
Ptchd1-201ENSMUST00000038665 Adamts13Q769J6 1426 aa11.64□□□□□ -0.55
Ptchd1-201ENSMUST00000038665 Edc4Q3UJB9 1406 aaKnown RBP11.63□□□□□ -0.55
Ptchd1-201ENSMUST00000038665 P3h3Q8CG70 732 aa11.63□□□□□ -0.55
Ptchd1-201ENSMUST00000038665 Polr3aB2RXC6 1390 aa11.63□□□□□ -0.55
Ptchd1-201ENSMUST00000038665 Gm156Q58A37 223 aa11.62□□□□□ -0.55
Ptchd1-201ENSMUST00000038665 Ptch1Q61115 1434 aa11.62□□□□□ -0.55
Ptchd1-201ENSMUST00000038665 Robo2Q7TPD3 1470 aa11.62□□□□□ -0.55
Ptchd1-201ENSMUST00000038665 Rock1P70335 1354 aa11.61□□□□□ -0.55
Ptchd1-201ENSMUST00000038665 Cpsf1Q9EPU4 1441 aaKnown RBP11.61□□□□□ -0.55
Ptchd1-201ENSMUST00000038665 Col17a1Q07563 1470 aa11.61□□□□□ -0.55
Ptchd1-201ENSMUST00000038665 Gm13695A2AK44 830 aa11.61□□□□□ -0.55
Ptchd1-201ENSMUST00000038665 Cwc22Q8C5N3 908 aaKnown RBP11.6□□□□□ -0.55
Ptchd1-201ENSMUST00000038665 Kcna4Q61423 654 aa11.59□□□□□ -0.55
Ptchd1-201ENSMUST00000038665 Kif1bQ60575 1816 aaKnown RBP11.59□□□□□ -0.55
Ptchd1-201ENSMUST00000038665 Os9Q8K2C7 672 aa11.58□□□□□ -0.56
Ptchd1-201ENSMUST00000038665 Neurl4Q5NCX5 1563 aa11.58□□□□□ -0.56
Ptchd1-201ENSMUST00000038665 Nos1Q9Z0J4 1429 aa11.58□□□□□ -0.56
Ptchd1-201ENSMUST00000038665 Abca6Q8K441 1624 aa11.58□□□□□ -0.56
Ptchd1-201ENSMUST00000038665 Plekhg5Q66T02 1073 aa11.58□□□□□ -0.56
Ptchd1-201ENSMUST00000038665 Tulp4Q9JIL5 1547 aa11.58□□□□□ -0.56
Ptchd1-201ENSMUST00000038665 Prdm10Q3UTQ7 1184 aa11.57□□□□□ -0.56
Ptchd1-201ENSMUST00000038665 Abca17E9PX95 1733 aa11.57□□□□□ -0.56
Ptchd1-201ENSMUST00000038665 DroshaQ5HZJ0 1373 aaKnown RBP11.56□□□□□ -0.56
Ptchd1-201ENSMUST00000038665 Ttc21bQ0HA38 1315 aa11.56□□□□□ -0.56
Ptchd1-201ENSMUST00000038665 Stra8P70278 393 aa11.56□□□□□ -0.56
Ptchd1-201ENSMUST00000038665 NrdcQ8BHG1 1161 aa11.56□□□□□ -0.56
Ptchd1-201ENSMUST00000038665 Rock2P70336 1388 aa11.56□□□□□ -0.56
Ptchd1-201ENSMUST00000038665 Depdc5P61460 1591 aa11.56□□□□□ -0.56
Ptchd1-201ENSMUST00000038665 Abcc6Q9R1S7 1498 aa11.55□□□□□ -0.56
Ptchd1-201ENSMUST00000038665 PnisrA2AJT4 805 aaKnown RBP11.55□□□□□ -0.56
Ptchd1-201ENSMUST00000038665 Myo5cE9Q1F5 1742 aa11.54□□□□□ -0.56
Ptchd1-201ENSMUST00000038665 Inpp5dQ9ES52 1191 aa11.54□□□□□ -0.56
Ptchd1-201ENSMUST00000038665 Nsd2Q8BVE8 1365 aa11.54□□□□□ -0.56
Ptchd1-201ENSMUST00000038665 OvosQ3UU35 1456 aa11.54□□□□□ -0.56
Ptchd1-201ENSMUST00000038665 Q7TT23 1179 aa11.54□□□□□ -0.56
Ptchd1-201ENSMUST00000038665 Pank3Q8R2W9 370 aa11.54□□□□□ -0.56
Ptchd1-201ENSMUST00000038665 Rpgrip1lQ8CG73 1264 aa11.53□□□□□ -0.56
Ptchd1-201ENSMUST00000038665 Znf518aB2RRF6 1478 aaKnown RBP11.53□□□□□ -0.56
Ptchd1-201ENSMUST00000038665 Ak9G3UYQ4 1894 aa11.53□□□□□ -0.56
Ptchd1-201ENSMUST00000038665 Fan1Q69ZT1 1020 aa11.53□□□□□ -0.56
Ptchd1-201ENSMUST00000038665 Fndc1E9Q043 1732 aa11.53□□□□□ -0.56
Ptchd1-201ENSMUST00000038665 Yeats2Q3TUF7 1407 aa11.51□□□□□ -0.57
Ptchd1-201ENSMUST00000038665 Aplp2Q06335 707 aa11.51□□□□□ -0.57
Ptchd1-201ENSMUST00000038665 Tnnt3Q9QZ47 272 aa11.51□□□□□ -0.57
Ptchd1-201ENSMUST00000038665 Ylpm1Q9R0I7 1386 aaKnown RBP11.51□□□□□ -0.57
Ptchd1-201ENSMUST00000038665 Kdm5cP41230 1554 aa11.51□□□□□ -0.57
Ptchd1-201ENSMUST00000038665 PrxO55103 1391 aa11.51□□□□□ -0.57
Ptchd1-201ENSMUST00000038665 Ppip5k1A2ARP1 1436 aa11.51□□□□□ -0.57
Ptchd1-201ENSMUST00000038665 Prex1Q69ZK0 1650 aa11.5□□□□□ -0.57
Ptchd1-201ENSMUST00000038665 AnkarA2RT91 1465 aa11.5□□□□□ -0.57
Ptchd1-201ENSMUST00000038665 Slc4a1apE9PX68 744 aa11.5□□□□□ -0.57
Ptchd1-201ENSMUST00000038665 ErbinQ80TH2 1402 aa11.5□□□□□ -0.57
Ptchd1-201ENSMUST00000038665 Gli2Q0VGT2 1544 aa11.5□□□□□ -0.57
Ptchd1-201ENSMUST00000038665 Gm20521D3Z5F7 333 aa11.5□□□□□ -0.57
Ptchd1-201ENSMUST00000038665 Ppp1r18Q8BQ30 594 aa11.5□□□□□ -0.57
Ptchd1-201ENSMUST00000038665 Srcin1Q9QWI6 1250 aa11.49□□□□□ -0.57
Ptchd1-201ENSMUST00000038665 Cnga1P29974 684 aa11.49□□□□□ -0.57
Ptchd1-201ENSMUST00000038665 Tmem131lQ3U3D7 1597 aa11.49□□□□□ -0.57
Ptchd1-201ENSMUST00000038665 Dip2cE9PWR4 1557 aa11.48□□□□□ -0.57
Retrieved 100 of 22,080 RNA–protein pairs in 22.1 ms