RNA–Protein interactions for RNA: ENSMUST00000023147.6

Ciita-201, Transcript of MHC class II transactivator, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ciita, Length 5,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ciita-201ENSMUST00000023147 Dnttip2Q8R2M2 758 aaKnown RBP13.55□□□□□ -0.24
Ciita-201ENSMUST00000023147 Stag3O70576 1240 aa13.55□□□□□ -0.24
Ciita-201ENSMUST00000023147 MsnP26041 577 aaKnown RBP13.55□□□□□ -0.24
Ciita-201ENSMUST00000023147 Eif4g1Q6NZJ6 1600 aaKnown RBP13.54□□□□□ -0.24
Ciita-201ENSMUST00000023147 Slc4a2P13808 1237 aaKnown RBP13.54□□□□□ -0.24
Ciita-201ENSMUST00000023147 ChgaP26339 463 aaKnown RBP13.54□□□□□ -0.24
Ciita-201ENSMUST00000023147 Iffo2Q8R2V2 512 aa13.54□□□□□ -0.24
Ciita-201ENSMUST00000023147 Speer4f1Q9D5Q6 258 aa13.54□□□□□ -0.24
Ciita-201ENSMUST00000023147 SetQ9EQU5 289 aaKnown RBP13.54□□□□□ -0.24
Ciita-201ENSMUST00000023147 Ggt6Q6PDE7 497 aa13.54□□□□□ -0.24
Ciita-201ENSMUST00000023147 Gm7298A0A0N4SVU1 1476 aa13.53□□□□□ -0.24
Ciita-201ENSMUST00000023147 HdgfP51859 237 aaKnown RBP13.53□□□□□ -0.24
Ciita-201ENSMUST00000023147 PrkcshO08795 521 aa13.53□□□□□ -0.24
Ciita-201ENSMUST00000023147 Plekhg5Q66T02 1073 aa13.53□□□□□ -0.24
Ciita-201ENSMUST00000023147 Rtf1A2AQ19 715 aaKnown RBP13.52□□□□□ -0.24
Ciita-201ENSMUST00000023147 Rock1P70335 1354 aa13.52□□□□□ -0.24
Ciita-201ENSMUST00000023147 Erich6bQ9D4S6 220 aa13.51□□□□□ -0.25
Ciita-201ENSMUST00000023147 Slx4Q6P1D7 1565 aa13.51□□□□□ -0.25
Ciita-201ENSMUST00000023147 WrnO09053 1401 aa13.51□□□□□ -0.25
Ciita-201ENSMUST00000023147 R3hcc1Q8BSI6 488 aa13.5□□□□□ -0.25
Ciita-201ENSMUST00000023147 SynmQ70IV5 1561 aa13.5□□□□□ -0.25
Ciita-201ENSMUST00000023147 Erich3F6QRE9 1637 aa13.5□□□□□ -0.25
Ciita-201ENSMUST00000023147 Ncoa2Q61026 1462 aa13.49□□□□□ -0.25
Ciita-201ENSMUST00000023147 Pcmtd1P59913 357 aa13.49□□□□□ -0.25
Ciita-201ENSMUST00000023147 Spryd3E9Q9B3 442 aa13.49□□□□□ -0.25
Ciita-201ENSMUST00000023147 Rad54l2Q99NG0 1466 aa13.49□□□□□ -0.25
Ciita-201ENSMUST00000023147 Slc4a1apE9PX68 744 aa13.49□□□□□ -0.25
Ciita-201ENSMUST00000023147 Rfx7F8VPJ6 1459 aa13.49□□□□□ -0.25
Ciita-201ENSMUST00000023147 Pak3Q61036 559 aa13.48□□□□□ -0.25
Ciita-201ENSMUST00000023147 Mrc2Q64449 1479 aa13.48□□□□□ -0.25
Ciita-201ENSMUST00000023147 Stard8Q8K031 1019 aa13.48□□□□□ -0.25
Ciita-201ENSMUST00000023147 Ifit1bl1D3Z6F0 470 aa13.48□□□□□ -0.25
Ciita-201ENSMUST00000023147 Golga2Q921M4 999 aa13.48□□□□□ -0.25
Ciita-201ENSMUST00000023147 Rrp12Q6P5B0 1295 aaKnown RBP13.47□□□□□ -0.25
Ciita-201ENSMUST00000023147 MecomP14404 1042 aa13.47□□□□□ -0.25
Ciita-201ENSMUST00000023147 Armcx1Q9CX83 456 aa13.47□□□□□ -0.25
Ciita-201ENSMUST00000023147 EprsQ8CGC7 1512 aaKnown RBP13.47□□□□□ -0.25
Ciita-201ENSMUST00000023147 Naip5Q9R016 1403 aa13.47□□□□□ -0.25
Ciita-201ENSMUST00000023147 A2mQ6GQT1 1474 aa13.46□□□□□ -0.25
Ciita-201ENSMUST00000023147 Stk24Q99KH8 431 aa13.46□□□□□ -0.25
Ciita-201ENSMUST00000023147 Tpm3P21107 285 aaKnown RBP13.45□□□□□ -0.26
Ciita-201ENSMUST00000023147 RdxP26043 583 aaKnown RBP13.45□□□□□ -0.26
Ciita-201ENSMUST00000023147 Urb2E9Q7L1 1524 aaKnown RBP13.45□□□□□ -0.26
Ciita-201ENSMUST00000023147 CgnP59242 1191 aa13.44□□□□□ -0.26
Ciita-201ENSMUST00000023147 Isy1Q69ZQ2 285 aaKnown RBP13.44□□□□□ -0.26
Ciita-201ENSMUST00000023147 Cc2d2bA0A286YDU8 1405 aa13.44□□□□□ -0.26
Ciita-201ENSMUST00000023147 Il16O54824 1322 aa13.44□□□□□ -0.26
Ciita-201ENSMUST00000023147 Peg3Q3URU2 1571 aa13.43□□□□□ -0.26
Ciita-201ENSMUST00000023147 Gtf2e1Q9D0D5 440 aa13.43□□□□□ -0.26
Ciita-201ENSMUST00000023147 Srcin1Q9QWI6 1250 aa13.43□□□□□ -0.26
Ciita-201ENSMUST00000023147 Prm3Q62100 101 aa13.43□□□□□ -0.26
Ciita-201ENSMUST00000023147 CrbnQ8C7D2 445 aa13.43□□□□□ -0.26
Ciita-201ENSMUST00000023147 Ftsj3Q9DBE9 838 aaKnown RBP13.43□□□□□ -0.26
Ciita-201ENSMUST00000023147 Ddrgk1Q80WW9 315 aa13.43□□□□□ -0.26
Ciita-201ENSMUST00000023147 CadpsQ80TJ1 1355 aa13.43□□□□□ -0.26
Ciita-201ENSMUST00000023147 Pank3Q8R2W9 370 aa13.42□□□□□ -0.26
Ciita-201ENSMUST00000023147 Ylpm1Q9R0I7 1386 aaKnown RBP13.42□□□□□ -0.26
Ciita-201ENSMUST00000023147 Cald1E9QA15 768 aaKnown RBP13.42□□□□□ -0.26
Ciita-201ENSMUST00000023147 Ncoa1P70365 1447 aa13.42□□□□□ -0.26
Ciita-201ENSMUST00000023147 3425401B19RikD3Z1D3 1412 aa13.41□□□□□ -0.26
Ciita-201ENSMUST00000023147 Crocc2F6XLV1 1638 aa13.41□□□□□ -0.26
Ciita-201ENSMUST00000023147 Pdcl3Q8BVF2 240 aa13.41□□□□□ -0.26
Ciita-201ENSMUST00000023147 Ttll13A4Q9F6 804 aa13.41□□□□□ -0.26
Ciita-201ENSMUST00000023147 Plekhh1Q80TI1 1356 aa13.4□□□□□ -0.26
Ciita-201ENSMUST00000023147 Q8BT18 775 aa13.4□□□□□ -0.26
Ciita-201ENSMUST00000023147 Ralbp1Q62172 648 aa13.4□□□□□ -0.26
Ciita-201ENSMUST00000023147 Lemd3Q9WU40 921 aa13.4□□□□□ -0.26
Ciita-201ENSMUST00000023147 Q3TQI7 289 aaKnown RBP13.4□□□□□ -0.27
Ciita-201ENSMUST00000023147 U2surpQ6NV83 1029 aaKnown RBP13.39□□□□□ -0.27
Ciita-201ENSMUST00000023147 Arid3cA6PWV5 409 aa13.39□□□□□ -0.27
Ciita-201ENSMUST00000023147 Rpgrip1lQ8CG73 1264 aa13.39□□□□□ -0.27
Ciita-201ENSMUST00000023147 Becn1O88597 448 aa13.38□□□□□ -0.27
Ciita-201ENSMUST00000023147 Zscan10Q3URR7 782 aa13.38□□□□□ -0.27
Ciita-201ENSMUST00000023147 Gm1043A0A140LJC2 1431 aa13.38□□□□□ -0.27
Ciita-201ENSMUST00000023147 NexmifQ5DTT1 1515 aa13.38□□□□□ -0.27
Ciita-201ENSMUST00000023147 Map7d2A2AG50 781 aa13.37□□□□□ -0.27
Ciita-201ENSMUST00000023147 CrebrfQ8CDG5 640 aaKnown RBP13.37□□□□□ -0.27
Ciita-201ENSMUST00000023147 Ccar1Q8CH18 1146 aaKnown RBP13.37□□□□□ -0.27
Ciita-201ENSMUST00000023147 Kif16bB1AVY7 1312 aa13.37□□□□□ -0.27
Ciita-201ENSMUST00000023147 Smarce1O54941 411 aaKnown RBP13.36□□□□□ -0.27
Ciita-201ENSMUST00000023147 Jph4Q80WT0 628 aa13.36□□□□□ -0.27
Ciita-201ENSMUST00000023147 Myom3A2ABU4 1439 aa13.36□□□□□ -0.27
Ciita-201ENSMUST00000023147 Rprd2Q6NXI6 1469 aaKnown RBP13.36□□□□□ -0.27
Ciita-201ENSMUST00000023147 Cnga1P29974 684 aa13.36□□□□□ -0.27
Ciita-201ENSMUST00000023147 Dcaf11Q91VU6 549 aa13.36□□□□□ -0.27
Ciita-201ENSMUST00000023147 Inpp5dQ9ES52 1191 aa13.35□□□□□ -0.27
Ciita-201ENSMUST00000023147 Kiaa0754Q69ZZ9 979 aa13.35□□□□□ -0.27
Ciita-201ENSMUST00000023147 Ak7Q9D2H2 614 aa13.35□□□□□ -0.27
Ciita-201ENSMUST00000023147 Tdrd9Q14BI7 1383 aa13.35□□□□□ -0.27
Ciita-201ENSMUST00000023147 DroshaQ5HZJ0 1373 aaKnown RBP13.35□□□□□ -0.27
Ciita-201ENSMUST00000023147 Kdm5bQ80Y84 1544 aa13.35□□□□□ -0.27
Ciita-201ENSMUST00000023147 Cspp1B2RX88 1205 aa13.35□□□□□ -0.27
Ciita-201ENSMUST00000023147 Zfp444Q3TDV8 331 aaKnown RBP13.35□□□□□ -0.27
Ciita-201ENSMUST00000023147 Zfp644E9QA22 1323 aa13.35□□□□□ -0.27
Ciita-201ENSMUST00000023147 Fam184bQ0KK56 942 aa13.34□□□□□ -0.27
Ciita-201ENSMUST00000023147 Vps53Q8CCB4 832 aa13.34□□□□□ -0.27
Ciita-201ENSMUST00000023147 Trim58Q5NCC9 485 aa13.34□□□□□ -0.27
Ciita-201ENSMUST00000023147 Ipo4Q8VI75 1082 aa13.34□□□□□ -0.27
Ciita-201ENSMUST00000023147 Atp6v1dP57746 247 aa13.34□□□□□ -0.27
Ciita-201ENSMUST00000023147 Rsph3aQ3UFY4 516 aa13.34□□□□□ -0.27
Retrieved 100 of 22,080 RNA–protein pairs in 12.6 ms