RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 Utp14aQ640M1 767 aaKnown RBP14.12□□□□□ -0.15
Msh3-201ENSMUST00000022220 B4galnt3Q6L8S8 986 aa14.12□□□□□ -0.15
Msh3-201ENSMUST00000022220 Disp1Q3TDN0 1521 aa14.11□□□□□ -0.15
Msh3-201ENSMUST00000022220 Speer4f1Q9D5Q6 258 aa14.11□□□□□ -0.15
Msh3-201ENSMUST00000022220 Samd9lQ69Z37 1561 aa14.11□□□□□ -0.15
Msh3-201ENSMUST00000022220 PxdnQ3UQ28 1475 aa14.11□□□□□ -0.15
Msh3-201ENSMUST00000022220 Psme1P97371 249 aa14.11□□□□□ -0.15
Msh3-201ENSMUST00000022220 MlecQ6ZQI3 291 aaKnown RBP14.11□□□□□ -0.15
Msh3-201ENSMUST00000022220 Abcc5Q9R1X5 1436 aa14.11□□□□□ -0.15
Msh3-201ENSMUST00000022220 Arhgap5P97393 1501 aa14.11□□□□□ -0.15
Msh3-201ENSMUST00000022220 Birc3O08863 600 aa14.11□□□□□ -0.15
Msh3-201ENSMUST00000022220 Armcx1Q9CX83 456 aa14.11□□□□□ -0.15
Msh3-201ENSMUST00000022220 TnnQ80Z71 1560 aa14.11□□□□□ -0.15
Msh3-201ENSMUST00000022220 Ankrd36D3Z4K0 1415 aa14.11□□□□□ -0.15
Msh3-201ENSMUST00000022220 Kcnh8P59111 1102 aa14.1□□□□□ -0.15
Msh3-201ENSMUST00000022220 Naip2Q9QUK4 1447 aa14.1□□□□□ -0.15
Msh3-201ENSMUST00000022220 Slc4a2P13808 1237 aaKnown RBP14.1□□□□□ -0.15
Msh3-201ENSMUST00000022220 Gm6268A2A3U9 297 aa14.1□□□□□ -0.15
Msh3-201ENSMUST00000022220 Ccdc141E9Q8Q6 1531 aa14.09□□□□□ -0.15
Msh3-201ENSMUST00000022220 Shq1Q7TMX5 569 aa14.09□□□□□ -0.15
Msh3-201ENSMUST00000022220 Ncoa3O09000 1398 aa14.08□□□□□ -0.16
Msh3-201ENSMUST00000022220 U2af1Q9D883 239 aaKnown RBP14.08□□□□□ -0.16
Msh3-201ENSMUST00000022220 Iqcf3Q9D498 203 aa14.08□□□□□ -0.16
Msh3-201ENSMUST00000022220 Gm1043A0A140LJC2 1431 aa14.07□□□□□ -0.16
Msh3-201ENSMUST00000022220 TchhA0A0B4J1F9 1599 aa14.06□□□□□ -0.16
Msh3-201ENSMUST00000022220 Mink1Q9JM52 1308 aa14.06□□□□□ -0.16
Msh3-201ENSMUST00000022220 Egfem1Q8C088 590 aa14.06□□□□□ -0.16
Msh3-201ENSMUST00000022220 Pla2r1Q62028 1487 aa14.06□□□□□ -0.16
Msh3-201ENSMUST00000022220 Mapk8ip3Q9ESN9 1337 aa14.06□□□□□ -0.16
Msh3-201ENSMUST00000022220 Ipo4Q8VI75 1082 aa14.06□□□□□ -0.16
Msh3-201ENSMUST00000022220 Mak16Q8BGS0 296 aaKnown RBP14.06□□□□□ -0.16
Msh3-201ENSMUST00000022220 Cd109Q8R422 1442 aa14.06□□□□□ -0.16
Msh3-201ENSMUST00000022220 Sall3Q62255 1320 aa14.05□□□□□ -0.16
Msh3-201ENSMUST00000022220 Esx1O88933 382 aa14.05□□□□□ -0.16
Msh3-201ENSMUST00000022220 Magi1Q6RHR9 1471 aa14.05□□□□□ -0.16
Msh3-201ENSMUST00000022220 Thoc2B1AZI6 1594 aaKnown RBP14.04□□□□□ -0.16
Msh3-201ENSMUST00000022220 Fam135aQ6NS59 1506 aa14.03□□□□□ -0.16
Msh3-201ENSMUST00000022220 Taok2Q6ZQ29 1240 aa14.03□□□□□ -0.16
Msh3-201ENSMUST00000022220 Rpgrip1lQ8CG73 1264 aa14.03□□□□□ -0.16
Msh3-201ENSMUST00000022220 Prdm16A2A935 1275 aa14.02□□□□□ -0.16
Msh3-201ENSMUST00000022220 Trim30dE9PWL0 497 aa14.02□□□□□ -0.16
Msh3-201ENSMUST00000022220 Q7TT23 1179 aa14.02□□□□□ -0.17
Msh3-201ENSMUST00000022220 Spryd3E9Q9B3 442 aa14□□□□□ -0.17
Msh3-201ENSMUST00000022220 Fam184bQ0KK56 942 aa14□□□□□ -0.17
Msh3-201ENSMUST00000022220 Afap1Q80YS6 731 aa14□□□□□ -0.17
Msh3-201ENSMUST00000022220 Q9D9H8 365 aa14□□□□□ -0.17
Msh3-201ENSMUST00000022220 BC005561E9Q5E2 1589 aa14□□□□□ -0.17
Msh3-201ENSMUST00000022220 Zscan10Q3URR7 782 aa14□□□□□ -0.17
Msh3-201ENSMUST00000022220 Golga2Q921M4 999 aa14□□□□□ -0.17
Msh3-201ENSMUST00000022220 Il16O54824 1322 aa13.99□□□□□ -0.17
Msh3-201ENSMUST00000022220 Kif21aQ9QXL2 1672 aa13.99□□□□□ -0.17
Msh3-201ENSMUST00000022220 ErbinQ80TH2 1402 aa13.99□□□□□ -0.17
Msh3-201ENSMUST00000022220 Dnai1Q8C0M8 701 aa13.99□□□□□ -0.17
Msh3-201ENSMUST00000022220 WizO88286 1684 aaKnown RBP13.99□□□□□ -0.17
Msh3-201ENSMUST00000022220 Sart3Q9JLI8 962 aaKnown RBP13.99□□□□□ -0.17
Msh3-201ENSMUST00000022220 AU015836B2RUM3 263 aa13.98□□□□□ -0.17
Msh3-201ENSMUST00000022220 Puf60Q3UEB3 564 aaKnown RBP13.98□□□□□ -0.17
Msh3-201ENSMUST00000022220 Kif7B7ZNG0 1348 aa13.98□□□□□ -0.17
Msh3-201ENSMUST00000022220 U2surpQ6NV83 1029 aaKnown RBP13.97□□□□□ -0.17
Msh3-201ENSMUST00000022220 Rtn4Q99P72 1162 aaKnown RBP13.97□□□□□ -0.17
Msh3-201ENSMUST00000022220 Hsp90ab1P11499 724 aaKnown RBP13.96□□□□□ -0.17
Msh3-201ENSMUST00000022220 Znf330Q922H9 316 aa13.96□□□□□ -0.17
Msh3-201ENSMUST00000022220 Ppm1gQ61074 542 aa13.96□□□□□ -0.17
Msh3-201ENSMUST00000022220 Rwdd1Q9CQK7 243 aa13.96□□□□□ -0.17
Msh3-201ENSMUST00000022220 4930567H17RikQ3V0K5 233 aa13.95□□□□□ -0.18
Msh3-201ENSMUST00000022220 Tmco5bQ80X59 307 aa13.95□□□□□ -0.18
Msh3-201ENSMUST00000022220 Nsd2Q8BVE8 1365 aa13.94□□□□□ -0.18
Msh3-201ENSMUST00000022220 Pibf1E9Q6K3 756 aa13.94□□□□□ -0.18
Msh3-201ENSMUST00000022220 Magi3Q9EQJ9 1476 aa13.92□□□□□ -0.18
Msh3-201ENSMUST00000022220 Trappc8E9PWG2 1437 aa13.92□□□□□ -0.18
Msh3-201ENSMUST00000022220 Myom3A2ABU4 1439 aa13.91□□□□□ -0.18
Msh3-201ENSMUST00000022220 L3mbtl2P59178 703 aa13.91□□□□□ -0.18
Msh3-201ENSMUST00000022220 Tsen2Q6P7W5 460 aa13.91□□□□□ -0.18
Msh3-201ENSMUST00000022220 Dnttip2Q8R2M2 758 aaKnown RBP13.91□□□□□ -0.18
Msh3-201ENSMUST00000022220 PnisrA2AJT4 805 aaKnown RBP13.91□□□□□ -0.18
Msh3-201ENSMUST00000022220 Chmp5Q9D7S9 219 aa13.91□□□□□ -0.18
Msh3-201ENSMUST00000022220 Shroom2A2ALU4 1481 aa13.91□□□□□ -0.18
Msh3-201ENSMUST00000022220 Ksr2Q3UVC0 959 aa13.91□□□□□ -0.18
Msh3-201ENSMUST00000022220 CenpjQ569L8 1344 aa13.9□□□□□ -0.18
Msh3-201ENSMUST00000022220 Atp10dQ8K2X1 1416 aa13.9□□□□□ -0.18
Msh3-201ENSMUST00000022220 Znf692Q3U381 531 aa13.89□□□□□ -0.19
Msh3-201ENSMUST00000022220 Cluap1Q8R3P7 413 aa13.89□□□□□ -0.19
Msh3-201ENSMUST00000022220 Ythdc2B2RR83 1445 aaKnown RBP13.89□□□□□ -0.19
Msh3-201ENSMUST00000022220 Atp2b2Q9R0K7 1198 aa13.87□□□□□ -0.19
Msh3-201ENSMUST00000022220 Ttll13A4Q9F6 804 aa13.87□□□□□ -0.19
Msh3-201ENSMUST00000022220 Htatsf1Q8BGC0 757 aa13.87□□□□□ -0.19
Msh3-201ENSMUST00000022220 Pdcl3Q8BVF2 240 aa13.87□□□□□ -0.19
Msh3-201ENSMUST00000022220 Tnnt1O88346 262 aa13.86□□□□□ -0.19
Msh3-201ENSMUST00000022220 EspnQ9ET47 871 aa13.86□□□□□ -0.19
Msh3-201ENSMUST00000022220 Stard8Q8K031 1019 aa13.86□□□□□ -0.19
Msh3-201ENSMUST00000022220 Gm156Q58A37 223 aa13.85□□□□□ -0.19
Msh3-201ENSMUST00000022220 Rock1P70335 1354 aa13.85□□□□□ -0.19
Msh3-201ENSMUST00000022220 Naip5Q9R016 1403 aa13.85□□□□□ -0.19
Msh3-201ENSMUST00000022220 Mre11Q61216 706 aa13.84□□□□□ -0.19
Msh3-201ENSMUST00000022220 Prex2Q3LAC4 1598 aa13.84□□□□□ -0.19
Msh3-201ENSMUST00000022220 Igf1rQ60751 1373 aa13.84□□□□□ -0.19
Msh3-201ENSMUST00000022220 Ttc21bQ0HA38 1315 aa13.83□□□□□ -0.2
Msh3-201ENSMUST00000022220 Cabp4Q8VHC5 271 aa13.83□□□□□ -0.2
Msh3-201ENSMUST00000022220 Arhgef40Q3UPH7 1517 aa13.83□□□□□ -0.2
Msh3-201ENSMUST00000022220 GsdmaQ9EST1 446 aa13.83□□□□□ -0.2
Retrieved 100 of 22,080 RNA–protein pairs in 25.9 ms