RNA–Protein interactions for RNA: ENSMUST00000005503.3

Msh6-201, Transcript of DNA mismatch repair protein Msh6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Msh6, Length 4,254 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6-201ENSMUST00000005503 Ift140E9PY46 1464 aa16.1■□□□□ 0.17
Msh6-201ENSMUST00000005503 Stk26Q99JT2 416 aa16.1■□□□□ 0.17
Msh6-201ENSMUST00000005503 TchhA0A0B4J1F9 1599 aa16.08■□□□□ 0.16
Msh6-201ENSMUST00000005503 Fam184bQ0KK56 942 aa16.08■□□□□ 0.16
Msh6-201ENSMUST00000005503 SlkO54988 1233 aa16.07■□□□□ 0.16
Msh6-201ENSMUST00000005503 Pank1Q8K4K6 548 aa16.07■□□□□ 0.16
Msh6-201ENSMUST00000005503 Erich6bQ9D4S6 220 aa16.07■□□□□ 0.16
Msh6-201ENSMUST00000005503 Grin2bQ01097 1482 aa16.07■□□□□ 0.16
Msh6-201ENSMUST00000005503 Naip2Q9QUK4 1447 aa16.07■□□□□ 0.16
Msh6-201ENSMUST00000005503 AknaQ80VW7 1404 aa16.06■□□□□ 0.16
Msh6-201ENSMUST00000005503 Ttll5Q8CHB8 1328 aa16.06■□□□□ 0.16
Msh6-201ENSMUST00000005503 Gm7298A0A0N4SVU1 1476 aa16.06■□□□□ 0.16
Msh6-201ENSMUST00000005503 KnstrnQ9D9Z1 312 aaKnown RBP16.06■□□□□ 0.16
Msh6-201ENSMUST00000005503 Kif7B7ZNG0 1348 aa16.06■□□□□ 0.16
Msh6-201ENSMUST00000005503 Ccdc30Q8BVF4 654 aa16.06■□□□□ 0.16
Msh6-201ENSMUST00000005503 KarsQ99MN1 595 aaKnown RBP16.06■□□□□ 0.16
Msh6-201ENSMUST00000005503 Cux1P53564 1515 aa16.06■□□□□ 0.16
Msh6-201ENSMUST00000005503 Arid3cA6PWV5 409 aa16.05■□□□□ 0.16
Msh6-201ENSMUST00000005503 Naip5Q9R016 1403 aa16.04■□□□□ 0.16
Msh6-201ENSMUST00000005503 Kif3bQ61771 747 aa16.04■□□□□ 0.16
Msh6-201ENSMUST00000005503 U2surpQ6NV83 1029 aaKnown RBP16.04■□□□□ 0.16
Msh6-201ENSMUST00000005503 Cc2d2bA0A286YDU8 1405 aa16.04■□□□□ 0.16
Msh6-201ENSMUST00000005503 3425401B19RikD3Z1D3 1412 aa16.04■□□□□ 0.16
Msh6-201ENSMUST00000005503 Plekhg5Q66T02 1073 aa16.03■□□□□ 0.16
Msh6-201ENSMUST00000005503 Kif16bB1AVY7 1312 aa16.03■□□□□ 0.16
Msh6-201ENSMUST00000005503 Pcf11G3X9Z4 1553 aa16.03■□□□□ 0.16
Msh6-201ENSMUST00000005503 Duox2A2AQ99 1517 aa16.02■□□□□ 0.16
Msh6-201ENSMUST00000005503 A2mQ6GQT1 1474 aa16.02■□□□□ 0.16
Msh6-201ENSMUST00000005503 Ccdc183A2AJB1 534 aa15.99■□□□□ 0.15
Msh6-201ENSMUST00000005503 Rfx1P48377 963 aa15.99■□□□□ 0.15
Msh6-201ENSMUST00000005503 Dhx57Q6P5D3 1388 aaKnown RBP15.98■□□□□ 0.15
Msh6-201ENSMUST00000005503 Tsen2Q6P7W5 460 aa15.98■□□□□ 0.15
Msh6-201ENSMUST00000005503 Ncoa1P70365 1447 aa15.97■□□□□ 0.15
Msh6-201ENSMUST00000005503 Ccar1Q8CH18 1146 aaKnown RBP15.97■□□□□ 0.15
Msh6-201ENSMUST00000005503 NgefQ8CHT1 710 aa15.97■□□□□ 0.15
Msh6-201ENSMUST00000005503 Birc3O08863 600 aa15.97■□□□□ 0.15
Msh6-201ENSMUST00000005503 Usp40Q8BWR4 1235 aa15.97■□□□□ 0.15
Msh6-201ENSMUST00000005503 Slx4Q6P1D7 1565 aa15.96■□□□□ 0.15
Msh6-201ENSMUST00000005503 Frmpd1A2AKB4 1549 aa15.96■□□□□ 0.15
Msh6-201ENSMUST00000005503 Ppp2r1aQ76MZ3 589 aa15.96■□□□□ 0.14
Msh6-201ENSMUST00000005503 Ncoa2Q61026 1462 aa15.95■□□□□ 0.14
Msh6-201ENSMUST00000005503 Pknox2Q8BG99 474 aa15.95■□□□□ 0.14
Msh6-201ENSMUST00000005503 Rtn4Q99P72 1162 aaKnown RBP15.95■□□□□ 0.14
Msh6-201ENSMUST00000005503 Hsp90b1P08113 802 aaKnown RBP15.94■□□□□ 0.14
Msh6-201ENSMUST00000005503 Trim58Q5NCC9 485 aa15.94■□□□□ 0.14
Msh6-201ENSMUST00000005503 Ralbp1Q62172 648 aa15.94■□□□□ 0.14
Msh6-201ENSMUST00000005503 Ccdc60Q8C4J0 545 aa15.94■□□□□ 0.14
Msh6-201ENSMUST00000005503 GsdmaQ9EST1 446 aa15.93■□□□□ 0.14
Msh6-201ENSMUST00000005503 Spag9Q58A65 1321 aaKnown RBP15.93■□□□□ 0.14
Msh6-201ENSMUST00000005503 Ylpm1Q9R0I7 1386 aaKnown RBP15.92■□□□□ 0.14
Msh6-201ENSMUST00000005503 Znf316Q6PGE4 1016 aa15.92■□□□□ 0.14
Msh6-201ENSMUST00000005503 Egfem1Q8C088 590 aa15.92■□□□□ 0.14
Msh6-201ENSMUST00000005503 Ccdc146E9Q9F7 977 aa15.91■□□□□ 0.14
Msh6-201ENSMUST00000005503 Pibf1E9Q6K3 756 aa15.91■□□□□ 0.14
Msh6-201ENSMUST00000005503 Plekhh1Q80TI1 1356 aa15.91■□□□□ 0.14
Msh6-201ENSMUST00000005503 Tnpo1Q8BFY9 898 aaKnown RBP15.91■□□□□ 0.14
Msh6-201ENSMUST00000005503 PogzQ8BZH4 1409 aaKnown RBP15.9■□□□□ 0.14
Msh6-201ENSMUST00000005503 Chmp4bQ9D8B3 224 aaKnown RBP15.9■□□□□ 0.14
Msh6-201ENSMUST00000005503 Casc1Q6TDU8 730 aa15.9■□□□□ 0.14
Msh6-201ENSMUST00000005503 Myom3A2ABU4 1439 aa15.9■□□□□ 0.14
Msh6-201ENSMUST00000005503 Camsap1A2AHC3 1581 aa15.89■□□□□ 0.13
Msh6-201ENSMUST00000005503 Tspyl2Q7TQI8 677 aa15.89■□□□□ 0.13
Msh6-201ENSMUST00000005503 Nutm1Q8BHP2 1126 aa15.88■□□□□ 0.13
Msh6-201ENSMUST00000005503 Lemd3Q9WU40 921 aa15.88■□□□□ 0.13
Msh6-201ENSMUST00000005503 CadpsQ80TJ1 1355 aa15.88■□□□□ 0.13
Msh6-201ENSMUST00000005503 Znf692Q3U381 531 aa15.88■□□□□ 0.13
Msh6-201ENSMUST00000005503 Ankrd26Q811D2 1581 aa15.87■□□□□ 0.13
Msh6-201ENSMUST00000005503 Apaf1O88879 1249 aa15.87■□□□□ 0.13
Msh6-201ENSMUST00000005503 Rrp12Q6P5B0 1295 aaKnown RBP15.87■□□□□ 0.13
Msh6-201ENSMUST00000005503 Rabep1O35551 862 aa15.86■□□□□ 0.13
Msh6-201ENSMUST00000005503 Abcc5Q9R1X5 1436 aa15.86■□□□□ 0.13
Msh6-201ENSMUST00000005503 Polr1aO35134 1717 aaKnown RBP15.86■□□□□ 0.13
Msh6-201ENSMUST00000005503 Nectin2P32507 530 aa15.85■□□□□ 0.13
Msh6-201ENSMUST00000005503 PrxO55103 1391 aa15.85■□□□□ 0.13
Msh6-201ENSMUST00000005503 Pcmtd1P59913 357 aa15.85■□□□□ 0.13
Msh6-201ENSMUST00000005503 Pde4cQ3UEI1 686 aa15.85■□□□□ 0.13
Msh6-201ENSMUST00000005503 HnrnpuQ8VEK3 800 aaKnown RBP15.85■□□□□ 0.13
Msh6-201ENSMUST00000005503 Soga1E1U8D0 1418 aa15.85■□□□□ 0.13
Msh6-201ENSMUST00000005503 CatipB9EKE5 520 aa15.84■□□□□ 0.13
Msh6-201ENSMUST00000005503 EprsQ8CGC7 1512 aaKnown RBP15.84■□□□□ 0.13
Msh6-201ENSMUST00000005503 Jph4Q80WT0 628 aa15.83■□□□□ 0.13
Msh6-201ENSMUST00000005503 Ipo4Q8VI75 1082 aa15.83■□□□□ 0.13
Msh6-201ENSMUST00000005503 Rsph3aQ3UFY4 516 aa15.83■□□□□ 0.12
Msh6-201ENSMUST00000005503 G3bp1P97855 465 aaKnown RBP15.83■□□□□ 0.12
Msh6-201ENSMUST00000005503 Stk11ipQ3TAA7 1072 aa15.82■□□□□ 0.12
Msh6-201ENSMUST00000005503 NexmifQ5DTT1 1515 aa15.82■□□□□ 0.12
Msh6-201ENSMUST00000005503 Arhgap31A6X8Z5 1425 aa15.82■□□□□ 0.12
Msh6-201ENSMUST00000005503 Rab3gap2Q8BMG7 1366 aa15.82■□□□□ 0.12
Msh6-201ENSMUST00000005503 Rprd2Q6NXI6 1469 aaKnown RBP15.81■□□□□ 0.12
Msh6-201ENSMUST00000005503 Cd109Q8R422 1442 aa15.81■□□□□ 0.12
Msh6-201ENSMUST00000005503 IbspQ61711 324 aa15.81■□□□□ 0.12
Msh6-201ENSMUST00000005503 Chmp4cQ9D7F7 232 aa15.8■□□□□ 0.12
Msh6-201ENSMUST00000005503 Ppp2r3aB2RXC8 1150 aa15.79■□□□□ 0.12
Msh6-201ENSMUST00000005503 Pdcl3Q8BVF2 240 aa15.79■□□□□ 0.12
Msh6-201ENSMUST00000005503 Cc2d1aQ8K1A6 943 aa15.79■□□□□ 0.12
Msh6-201ENSMUST00000005503 Map3k5O35099 1380 aa15.79■□□□□ 0.12
Msh6-201ENSMUST00000005503 Stard8Q8K031 1019 aa15.78■□□□□ 0.12
Msh6-201ENSMUST00000005503 Gm1043A0A140LJC2 1431 aa15.78■□□□□ 0.12
Msh6-201ENSMUST00000005503 Kank1E9Q238 1360 aa15.77■□□□□ 0.12
Msh6-201ENSMUST00000005503 Tnnt1O88346 262 aa15.77■□□□□ 0.12
Retrieved 100 of 22,080 RNA–protein pairs in 32.3 ms