RNA–Protein interactions for RNA: YOR157C

PUP1, Transcript of Beta 2 subunit of the 20S proteasome, yeastyeast

Gene PUP1, Length 786 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUP1YOR157C YPR202WQ08993 238 aa7.45□□□□□ -1.22
PUP1YOR157C MNS1P32906 549 aa7.44□□□□□ -1.22
PUP1YOR157C TEF4P36008 412 aaKnown RBP7.44□□□□□ -1.22
PUP1YOR157C FRE2P36033 711 aa7.44□□□□□ -1.22
PUP1YOR157C HXT9P40885 567 aa7.44□□□□□ -1.22
PUP1YOR157C ABM1P47146 123 aa7.44□□□□□ -1.22
PUP1YOR157C HXT11P54862 567 aa7.44□□□□□ -1.22
PUP1YOR157C YPQ2Q06328 317 aa7.44□□□□□ -1.22
PUP1YOR157C SNA4Q07549 140 aa7.44□□□□□ -1.22
PUP1YOR157C IRC19Q07843 230 aa7.44□□□□□ -1.22
PUP1YOR157C BRX1Q08235 291 aaKnown RBP7.44□□□□□ -1.22
PUP1YOR157C YOR214CQ12282 236 aa7.44□□□□□ -1.22
PUP1YOR157C SAS5Q99314 248 aa7.44□□□□□ -1.22
PUP1YOR157C MSI1P13712 422 aa7.43□□□□□ -1.22
PUP1YOR157C VMA11P32842 164 aa7.43□□□□□ -1.22
PUP1YOR157C LHP1P33399 275 aaKnown RBP7.43□□□□□ -1.22
PUP1YOR157C MRPL16P38064 232 aa7.43□□□□□ -1.22
PUP1YOR157C ZTA1P38230 334 aaKnown RBP7.43□□□□□ -1.22
PUP1YOR157C MTR3P48240 250 aaPredicted RBP7.43□□□□□ -1.22
PUP1YOR157C SCS7Q03529 384 aa7.43□□□□□ -1.22
PUP1YOR157C RTC5Q12108 567 aaKnown RBP7.43□□□□□ -1.22
PUP1YOR157C FRE8Q12209 686 aa7.43□□□□□ -1.22
PUP1YOR157C RAP1P11938 827 aa7.42□□□□□ -1.22
PUP1YOR157C MER1P16523 270 aa7.42□□□□□ -1.22
PUP1YOR157C EXG1P23776 448 aaKnown RBP7.42□□□□□ -1.22
PUP1YOR157C POP1P41812 875 aa7.42□□□□□ -1.22
PUP1YOR157C SHE4P51534 789 aa7.42□□□□□ -1.22
PUP1YOR157C CUS2P53830 285 aaPredicted RBP7.42□□□□□ -1.22
PUP1YOR157C YML119WQ03208 357 aa7.42□□□□□ -1.22
PUP1YOR157C GAT3Q07928 141 aa7.42□□□□□ -1.22
PUP1YOR157C PUT2P07275 575 aa7.41□□□□□ -1.22
PUP1YOR157C UGA1P17649 471 aa7.41□□□□□ -1.22
PUP1YOR157C GFD2P25370 566 aaKnown RBP7.41□□□□□ -1.22
PUP1YOR157C ICS2P38284 255 aa7.41□□□□□ -1.22
PUP1YOR157C TSC10P38342 320 aa7.41□□□□□ -1.22
PUP1YOR157C RRP4P38792 359 aaKnown RBP7.41□□□□□ -1.22
PUP1YOR157C UBC13P52490 153 aa7.41□□□□□ -1.22
PUP1YOR157C PRM15Q03262 622 aa7.41□□□□□ -1.22
PUP1YOR157C UTP21Q06078 939 aaPredicted RBP7.41□□□□□ -1.22
PUP1YOR157C FIT3Q08907 204 aa7.41□□□□□ -1.22
PUP1YOR157C NIP7Q08962 181 aaKnown RBP7.41□□□□□ -1.22
PUP1YOR157C YDL176WQ12027 708 aa7.41□□□□□ -1.22
PUP1YOR157C RPN6Q12377 434 aa7.41□□□□□ -1.22
PUP1YOR157C SEC12P11655 471 aa7.4□□□□□ -1.22
PUP1YOR157C RPO26P20435 155 aa7.4□□□□□ -1.22
PUP1YOR157C GIT1P25346 518 aa7.4□□□□□ -1.22
PUP1YOR157C HSP30P25619 332 aa7.4□□□□□ -1.22
PUP1YOR157C OAF3P36023 863 aa7.4□□□□□ -1.22
PUP1YOR157C KRE29P40026 464 aa7.4□□□□□ -1.22
PUP1YOR157C SSQ1Q05931 657 aaPredicted RBP7.4□□□□□ -1.22
PUP1YOR157C NDL1Q06568 189 aa7.4□□□□□ -1.22
PUP1YOR157C RTN2Q12443 393 aa7.4□□□□□ -1.22
PUP1YOR157C RPS16AP0CX51 143 aaKnown RBP7.39□□□□□ -1.23
PUP1YOR157C RPS16BP0CX52 143 aaKnown RBP7.39□□□□□ -1.23
PUP1YOR157C CLB3P24870 427 aa7.39□□□□□ -1.23
PUP1YOR157C RPS5P26783 225 aaKnown RBP7.39□□□□□ -1.23
PUP1YOR157C MCM10P32354 571 aa7.39□□□□□ -1.23
PUP1YOR157C MRPL17P36528 281 aa7.39□□□□□ -1.23
PUP1YOR157C YHR219WP38900 624 aa7.39□□□□□ -1.23
PUP1YOR157C RGI1P40043 161 aaPredicted RBP7.39□□□□□ -1.23
PUP1YOR157C GLR1P41921 483 aaKnown RBP7.39□□□□□ -1.23
PUP1YOR157C ADH6Q04894 360 aaKnown RBP7.39□□□□□ -1.23
PUP1YOR157C YPR147CQ06522 304 aaKnown RBP7.39□□□□□ -1.23
PUP1YOR157C NOP12Q08208 459 aaKnown RBP7.39□□□□□ -1.23
PUP1YOR157C YOR343CQ12484 108 aa7.39□□□□□ -1.23
PUP1YOR157C YHR214C-EQ8TGK0 99 aa7.39□□□□□ -1.23
PUP1YOR157C YMR085WP0CF18 432 aa7.38□□□□□ -1.23
PUP1YOR157C RPB8P20436 146 aa7.38□□□□□ -1.23
PUP1YOR157C MDH3P32419 343 aaKnown RBP RIP-Chip data7.38□□□□□ -1.23not detected
PUP1YOR157C SHM2P37291 469 aaKnown RBP7.38□□□□□ -1.23
PUP1YOR157C ROT2P38138 954 aa7.38□□□□□ -1.23
PUP1YOR157C ECM8P38246 354 aa7.38□□□□□ -1.23
PUP1YOR157C YHC3P47040 408 aa7.38□□□□□ -1.23
PUP1YOR157C YJR142WP47173 342 aa7.38□□□□□ -1.23
PUP1YOR157C YIP4P53093 235 aa7.38□□□□□ -1.23
PUP1YOR157C APJ1P53940 528 aa7.38□□□□□ -1.23
PUP1YOR157C YPL077CQ02831 240 aa7.38□□□□□ -1.23
PUP1YOR157C YMR279CQ03263 540 aa7.38□□□□□ -1.23
PUP1YOR157C YLR413WQ06689 675 aa7.38□□□□□ -1.23
PUP1YOR157C NTG2Q08214 380 aa7.38□□□□□ -1.23
PUP1YOR157C RLM1Q12224 676 aa7.38□□□□□ -1.23
PUP1YOR157C DFG16Q99234 619 aa7.38□□□□□ -1.23
PUP1YOR157C FSH3Q99369 266 aa7.38□□□□□ -1.23
PUP1YOR157C RPS23AP0CX29 145 aaKnown RBP7.37□□□□□ -1.23
PUP1YOR157C RPS23BP0CX30 145 aa7.37□□□□□ -1.23
PUP1YOR157C PHO81P17442 1178 aa7.37□□□□□ -1.23
PUP1YOR157C CLB6P32943 380 aa7.37□□□□□ -1.23
PUP1YOR157C YBR032WP38223 100 aa7.37□□□□□ -1.23
PUP1YOR157C BIG1P38813 335 aa7.37□□□□□ -1.23
PUP1YOR157C RSC9Q03124 581 aa7.37□□□□□ -1.23
PUP1YOR157C YDR102CQ03864 110 aa7.37□□□□□ -1.23
PUP1YOR157C RSM24Q03976 319 aa7.37□□□□□ -1.23
PUP1YOR157C MUM3Q08750 479 aa7.37□□□□□ -1.23
PUP1YOR157C RPS1BP23248 255 aaKnown RBP7.36□□□□□ -1.23
PUP1YOR157C ERG4P25340 473 aa7.36□□□□□ -1.23
PUP1YOR157C MDL1P33310 695 aa7.36□□□□□ -1.23
PUP1YOR157C SLC1P33333 303 aa7.36□□□□□ -1.23
PUP1YOR157C HIS7P33734 552 aaKnown RBP7.36□□□□□ -1.23
PUP1YOR157C SPT10P35208 640 aa7.36□□□□□ -1.23
PUP1YOR157C ARN1P38731 627 aa7.36□□□□□ -1.23
Retrieved 100 of 5,963 RNA–protein pairs in 8.5 ms