RNA–Protein interactions for RNA: YOL038W

PRE6, Transcript of Alpha 4 subunit of the 20S proteasome, yeastyeast

Gene PRE6, Length 765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE6YOL038W SNF12P53628 566 aa9.45□□□□□ -0.9
PRE6YOL038W ATG38Q05789 226 aaKnown RBP9.45□□□□□ -0.9
PRE6YOL038W GPI11Q06636 219 aa9.45□□□□□ -0.9
PRE6YOL038W NOP12Q08208 459 aaKnown RBP9.45□□□□□ -0.9
PRE6YOL038W HNT3Q08702 217 aa9.45□□□□□ -0.9
PRE6YOL038W TSC13Q99190 310 aa9.45□□□□□ -0.9
PRE6YOL038W TIM9O74700 87 aa9.44□□□□□ -0.9
PRE6YOL038W SIR3P06701 978 aa9.44□□□□□ -0.9
PRE6YOL038W SUI3P09064 285 aaKnown RBP9.44□□□□□ -0.9
PRE6YOL038W PDA1P16387 420 aaKnown RBP9.44□□□□□ -0.9
PRE6YOL038W RPB8P20436 146 aa9.44□□□□□ -0.9
PRE6YOL038W REC107P21651 314 aa9.44□□□□□ -0.9
PRE6YOL038W HIR2P32480 875 aa9.44□□□□□ -0.9
PRE6YOL038W NUP57P48837 541 aa9.44□□□□□ -0.9
PRE6YOL038W GET1P53192 235 aa9.44□□□□□ -0.9
PRE6YOL038W RBG2P53295 368 aaKnown RBP9.44□□□□□ -0.9
PRE6YOL038W SPR6Q01684 191 aa9.44□□□□□ -0.9
PRE6YOL038W RAF1Q06891 181 aa9.44□□□□□ -0.9
PRE6YOL038W URA2P07259 2214 aaKnown RBP9.43□□□□□ -0.9
PRE6YOL038W CDC36P06100 191 aaPredicted RBP9.43□□□□□ -0.9
PRE6YOL038W YPK2P18961 677 aa9.43□□□□□ -0.9
PRE6YOL038W HSP30P25619 332 aa9.43□□□□□ -0.9
PRE6YOL038W PEX3P28795 441 aa9.43□□□□□ -0.9
PRE6YOL038W ARP2P32381 391 aaKnown RBP9.43□□□□□ -0.9
PRE6YOL038W TIM12P32830 109 aa9.43□□□□□ -0.9
PRE6YOL038W MDL1P33310 695 aa9.43□□□□□ -0.9
PRE6YOL038W GDH2P33327 1092 aaKnown RBP9.43□□□□□ -0.9
PRE6YOL038W SKG1P36169 355 aa9.43□□□□□ -0.9
PRE6YOL038W MRPL39P36533 70 aa9.43□□□□□ -0.9
PRE6YOL038W GPI1P53306 609 aa9.43□□□□□ -0.9
PRE6YOL038W VBA4Q04602 768 aaKnown RBP9.43□□□□□ -0.9
PRE6YOL038W YDL176WQ12027 708 aa9.43□□□□□ -0.9
PRE6YOL038W MRX4Q12467 430 aa9.43□□□□□ -0.9
PRE6YOL038W DET1Q99288 334 aaKnown RBP9.43□□□□□ -0.9
PRE6YOL038W DYN1P36022 4092 aa9.42□□□□□ -0.9
PRE6YOL038W YAL064W-BO13512 126 aa9.42□□□□□ -0.9
PRE6YOL038W RER1P25560 188 aa9.42□□□□□ -0.9
PRE6YOL038W IDH1P28834 360 aaKnown RBP RIP-Chip data9.42□□□□□ -0.9not detected
PRE6YOL038W CYS4P32582 507 aaKnown RBP9.42□□□□□ -0.9
PRE6YOL038W AIM3P38266 947 aaKnown RBP9.42□□□□□ -0.9
PRE6YOL038W YHL012WP38709 493 aa9.42□□□□□ -0.9
PRE6YOL038W RPP1P38786 293 aa9.42□□□□□ -0.9
PRE6YOL038W SKN7P38889 622 aa9.42□□□□□ -0.9
PRE6YOL038W GPP1P41277 250 aaKnown RBP9.42□□□□□ -0.9
PRE6YOL038W NOP9P47077 666 aaKnown RBP9.42□□□□□ -0.9
PRE6YOL038W ADO1P47143 340 aaKnown RBP9.42□□□□□ -0.9
PRE6YOL038W PCP1P53259 346 aa9.42□□□□□ -0.9
PRE6YOL038W NAN1Q02931 896 aaKnown RBP9.42□□□□□ -0.9
PRE6YOL038W SVL3Q03088 825 aaKnown RBP9.42□□□□□ -0.9
PRE6YOL038W SWA2Q06677 668 aa9.42□□□□□ -0.9
PRE6YOL038W SKI7Q08491 747 aaPredicted RBP9.42□□□□□ -0.9
PRE6YOL038W RLM1Q12224 676 aa9.42□□□□□ -0.9
PRE6YOL038W YOR097CQ12274 175 aaPredicted RBP9.42□□□□□ -0.9
PRE6YOL038W SFM1Q12314 213 aa9.42□□□□□ -0.9
PRE6YOL038W YOR343CQ12484 108 aa9.42□□□□□ -0.9
PRE6YOL038W MHF2Q3E829 80 aa9.42□□□□□ -0.9
PRE6YOL038W RHO1P06780 209 aaKnown RBP9.41□□□□□ -0.9
PRE6YOL038W MSS18P08593 268 aa9.41□□□□□ -0.9
PRE6YOL038W PET9P18239 318 aaKnown RBP9.41□□□□□ -0.9
PRE6YOL038W RHB1P25378 209 aa9.41□□□□□ -0.9
PRE6YOL038W ITR2P30606 609 aa9.41□□□□□ -0.9
PRE6YOL038W ARN2P38724 620 aa9.41□□□□□ -0.9
PRE6YOL038W ALP1P38971 573 aa9.41□□□□□ -0.9
PRE6YOL038W DAM1P53267 343 aa9.41□□□□□ -0.9
PRE6YOL038W UGO1Q03327 502 aa9.41□□□□□ -0.9
PRE6YOL038W SET6Q12529 373 aa9.41□□□□□ -0.9
PRE6YOL038W MET2P08465 486 aa9.4□□□□□ -0.9
PRE6YOL038W YOL163WP0CF20 169 aa9.4□□□□□ -0.9
PRE6YOL038W HBS1P32769 611 aaKnown RBP9.4□□□□□ -0.9
PRE6YOL038W ARC19P33204 171 aaKnown RBP9.4□□□□□ -0.9
PRE6YOL038W SRO77P38163 1010 aa9.4□□□□□ -0.9
PRE6YOL038W PEX18P38855 283 aa9.4□□□□□ -0.9
PRE6YOL038W YMR144WP40214 342 aaKnown RBP9.4□□□□□ -0.9
PRE6YOL038W TOM22P49334 152 aa9.4□□□□□ -0.9
PRE6YOL038W KAP120Q02932 1032 aa9.4□□□□□ -0.9
PRE6YOL038W MRP51Q02950 344 aa9.4□□□□□ -0.9
PRE6YOL038W SCS7Q03529 384 aa9.4□□□□□ -0.9
PRE6YOL038W SPC2Q04969 178 aa9.4□□□□□ -0.9
PRE6YOL038W YDL180WQ12301 547 aa9.4□□□□□ -0.9
PRE6YOL038W CMK2P22517 447 aa9.39□□□□□ -0.91
PRE6YOL038W RCY1P39531 840 aa9.39□□□□□ -0.91
PRE6YOL038W COG3P40094 801 aa9.39□□□□□ -0.91
PRE6YOL038W AVT7P40501 490 aa9.39□□□□□ -0.91
PRE6YOL038W GCN20P43535 752 aaKnown RBP9.39□□□□□ -0.91
PRE6YOL038W MPP6P53725 186 aaPredicted RBP9.39□□□□□ -0.91
PRE6YOL038W IRC19Q07843 230 aa9.39□□□□□ -0.91
PRE6YOL038W PFK27Q12471 397 aaPredicted RBP9.39□□□□□ -0.91
PRE6YOL038W NTG1P31378 399 aa9.38□□□□□ -0.91
PRE6YOL038W TFC1P32367 649 aa9.38□□□□□ -0.91
PRE6YOL038W SOF1P33750 489 aaKnown RBP9.38□□□□□ -0.91
PRE6YOL038W YKL187CP34231 750 aa9.38□□□□□ -0.91
PRE6YOL038W SWD1P39706 426 aa9.38□□□□□ -0.91
PRE6YOL038W KRE29P40026 464 aa9.38□□□□□ -0.91
PRE6YOL038W YIL165CP40446 119 aa9.38□□□□□ -0.91
PRE6YOL038W NAS2P40555 220 aa9.38□□□□□ -0.91
PRE6YOL038W IDP2P41939 412 aa9.38□□□□□ -0.91
PRE6YOL038W CAK1P43568 368 aaPredicted RBP9.38□□□□□ -0.91
PRE6YOL038W IRC7P43623 340 aa9.38□□□□□ -0.91
PRE6YOL038W YGL235WP53071 178 aa9.38□□□□□ -0.91
PRE6YOL038W DMA2P53924 522 aa9.38□□□□□ -0.91
Retrieved 100 of 5,963 RNA–protein pairs in 21.8 ms