RNA–Protein interactions for RNA: YNL224C

SQS1, Transcript of Protein that stimulates the ATPase and helicase activities of Prp43p, yeast

Gene SQS1, Length 2,304 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SQS1	YNL224C	YMR206W	Q03695	313 aa		3.11	□□□□□ -1.91
SQS1	YNL224C	CAB1	Q04430	367 aa		3.11	□□□□□ -1.91
SQS1	YNL224C	PUS5	Q06244	254 aa		3.11	□□□□□ -1.91
SQS1	YNL224C	SYT1	Q06836	1226 aa		3.11	□□□□□ -1.91
SQS1	YNL224C	DCI1	Q08558	271 aa		3.11	□□□□□ -1.91
SQS1	YNL224C	GPB1	Q08886	897 aa		3.11	□□□□□ -1.91
SQS1	YNL224C	AFT2	Q08957	416 aa		3.11	□□□□□ -1.91
SQS1	YNL224C	SPE4	Q12455	300 aa		3.11	□□□□□ -1.91
SQS1	YNL224C	NBL1	Q3E7Y6	73 aa		3.11	□□□□□ -1.91
SQS1	YNL224C	SAS5	Q99314	248 aa		3.11	□□□□□ -1.91
SQS1	YNL224C	BNR1	P40450	1375 aa		3.11	□□□□□ -1.91
SQS1	YNL224C	TPK2	P06245	380 aa		3.1	□□□□□ -1.91
SQS1	YNL224C	SEC53	P07283	254 aa	Known RBP	3.1	□□□□□ -1.91
SQS1	YNL224C	MAS2	P11914	482 aa		3.1	□□□□□ -1.91
SQS1	YNL224C	DPM1	P14020	267 aa	Known RBP	3.1	□□□□□ -1.91
SQS1	YNL224C	YSP3	P25036	478 aa		3.1	□□□□□ -1.91
SQS1	YNL224C	MRP20	P32387	263 aa		3.1	□□□□□ -1.91
SQS1	YNL224C	UTR4	P32626	227 aa		3.1	□□□□□ -1.91
SQS1	YNL224C	RPT3	P33298	428 aa	Known RBP	3.1	□□□□□ -1.91
SQS1	YNL224C	THI80	P35202	319 aa		3.1	□□□□□ -1.91
SQS1	YNL224C	COS9	P36034	407 aa		3.1	□□□□□ -1.91
SQS1	YNL224C	YKR078W	P36158	585 aa	Known RBP	3.1	□□□□□ -1.91
SQS1	YNL224C	APN2	P38207	520 aa		3.1	□□□□□ -1.91
SQS1	YNL224C	COX15	P40086	486 aa		3.1	□□□□□ -1.91
SQS1	YNL224C	HXT9	P40885	567 aa		3.1	□□□□□ -1.91
SQS1	YNL224C	SLS1	P42900	643 aa		3.1	□□□□□ -1.91
SQS1	YNL224C	MGA1	P53050	456 aa		3.1	□□□□□ -1.91
SQS1	YNL224C	YGL108C	P53139	140 aa		3.1	□□□□□ -1.91
SQS1	YNL224C	RMD9	P53140	646 aa	Known RBP	3.1	□□□□□ -1.91
SQS1	YNL224C	JAC1	P53193	184 aa		3.1	□□□□□ -1.91
SQS1	YNL224C	TIM13	P53299	105 aa		3.1	□□□□□ -1.91
SQS1	YNL224C	BIO5	P53744	561 aa	Known RBP	3.1	□□□□□ -1.91
SQS1	YNL224C	OCA2	P53949	197 aa		3.1	□□□□□ -1.91
SQS1	YNL224C	HXT11	P54862	567 aa		3.1	□□□□□ -1.91
SQS1	YNL224C	TRS31	Q03337	283 aa		3.1	□□□□□ -1.91
SQS1	YNL224C	TPP1	Q03796	238 aa		3.1	□□□□□ -1.91
SQS1	YNL224C	CAB5	Q03941	241 aa		3.1	□□□□□ -1.91
SQS1	YNL224C	TSA2	Q04120	196 aa		3.1	□□□□□ -1.91
SQS1	YNL224C	TVP18	Q04767	167 aa		3.1	□□□□□ -1.91
SQS1	YNL224C	DUS4	Q06063	367 aa		3.1	□□□□□ -1.91
SQS1	YNL224C	TMA10	Q06177	86 aa		3.1	□□□□□ -1.91
SQS1	YNL224C	MRX9	Q07349	420 aa	Known RBP	3.1	□□□□□ -1.91
SQS1	YNL224C	FSF1	Q12029	327 aa	Known RBP	3.1	□□□□□ -1.91
SQS1	YNL224C	JLP1	Q12358	412 aa		3.1	□□□□□ -1.91
SQS1	YNL224C	RKM5	Q12367	367 aa		3.1	□□□□□ -1.91
SQS1	YNL224C	GTT2	Q12390	233 aa		3.1	□□□□□ -1.91
SQS1	YNL224C	MLP2	P40457	1679 aa		3.1	□□□□□ -1.91
SQS1	YNL224C	CAT8	P39113	1433 aa		3.1	□□□□□ -1.91
SQS1	YNL224C	RPP0	P05317	312 aa	Known RBP	3.1	□□□□□ -1.91
SQS1	YNL224C	NAM2	P11325	894 aa		3.1	□□□□□ -1.91
SQS1	YNL224C	CDC26	P14724	124 aa		3.1	□□□□□ -1.91
SQS1	YNL224C	SPO7	P18410	259 aa		3.1	□□□□□ -1.91
SQS1	YNL224C	SEC59	P20048	519 aa		3.1	□□□□□ -1.91
SQS1	YNL224C	CDC20	P26309	610 aa		3.1	□□□□□ -1.91
SQS1	YNL224C	ERG9	P29704	444 aa		3.1	□□□□□ -1.91
SQS1	YNL224C	PRO3	P32263	286 aa	Known RBP	3.1	□□□□□ -1.91
SQS1	YNL224C	EMP70	P32802	667 aa		3.1	□□□□□ -1.91
SQS1	YNL224C	YNK1	P36010	153 aa	Known RBP	3.1	□□□□□ -1.91
SQS1	YNL224C	YKL071W	P36086	256 aa		3.1	□□□□□ -1.91
SQS1	YNL224C	NAT2	P37293	288 aa		3.1	□□□□□ -1.91
SQS1	YNL224C	TRM7	P38238	310 aa	Known RBP	3.1	□□□□□ -1.91
SQS1	YNL224C	VBA2	P38358	474 aa	Known RBP	3.1	□□□□□ -1.91
SQS1	YNL224C	ALP1	P38971	573 aa		3.1	□□□□□ -1.91
SQS1	YNL224C	PSF2	P40359	213 aa		3.1	□□□□□ -1.91
SQS1	YNL224C	DPB11	P47027	764 aa	Predicted RBP	3.1	□□□□□ -1.91
SQS1	YNL224C	YJR124C	P47159	448 aa		3.1	□□□□□ -1.91
SQS1	YNL224C	NRD1	P53617	575 aa	Known RBP RIP-Chip data	3.1	□□□□□ -1.91	not detected
SQS1	YNL224C	HCH1	P53834	153 aa		3.1	□□□□□ -1.91
SQS1	YNL224C	CRZ1	P53968	678 aa		3.1	□□□□□ -1.91
SQS1	YNL224C	DAD3	P69850	94 aa		3.1	□□□□□ -1.91
SQS1	YNL224C	MSC1	Q03104	513 aa		3.1	□□□□□ -1.91
SQS1	YNL224C	YPR196W	Q06595	470 aa		3.1	□□□□□ -1.91
SQS1	YNL224C	INP54	Q08227	384 aa	Known RBP	3.1	□□□□□ -1.91
SQS1	YNL224C	TPT1	Q12272	230 aa	Known RBP	3.1	□□□□□ -1.91
SQS1	YNL224C	RDL1	Q12305	139 aa	Known RBP	3.1	□□□□□ -1.91
SQS1	YNL224C	YKL033W-A	Q86ZR7	236 aa		3.1	□□□□□ -1.91
SQS1	YNL224C	YBR126W-A	Q8TGU7	68 aa		3.1	□□□□□ -1.91
SQS1	YNL224C	SCC2	Q04002	1493 aa		3.1	□□□□□ -1.91
SQS1	YNL224C	GPM1	P00950	247 aa	Known RBP	3.09	□□□□□ -1.91
SQS1	YNL224C	YFR010W-A	P0C5N0	62 aa		3.09	□□□□□ -1.91
SQS1	YNL224C	STF2	P16965	84 aa		3.09	□□□□□ -1.91
SQS1	YNL224C	GRX2	P17695	143 aa	Known RBP	3.09	□□□□□ -1.91
SQS1	YNL224C	STE18	P18852	110 aa		3.09	□□□□□ -1.91
SQS1	YNL224C	GAP1	P19145	602 aa	Predicted RBP	3.09	□□□□□ -1.91
SQS1	YNL224C	VPS33	P20795	691 aa		3.09	□□□□□ -1.91
SQS1	YNL224C	PRE1	P22141	198 aa	Known RBP	3.09	□□□□□ -1.91
SQS1	YNL224C	EXG1	P23776	448 aa	Known RBP	3.09	□□□□□ -1.91
SQS1	YNL224C	GSY2	P27472	705 aa		3.09	□□□□□ -1.91
SQS1	YNL224C	PEX4	P29340	183 aa		3.09	□□□□□ -1.91
SQS1	YNL224C	SYN8	P31377	255 aa		3.09	□□□□□ -1.91
SQS1	YNL224C	RIB5	P38145	238 aa		3.09	□□□□□ -1.91
SQS1	YNL224C	RCK1	P38622	512 aa		3.09	□□□□□ -1.91
SQS1	YNL224C	RPF1	P38805	295 aa	Known RBP	3.09	□□□□□ -1.91
SQS1	YNL224C	SOL3	P38858	249 aa		3.09	□□□□□ -1.91
SQS1	YNL224C	MAD2	P40958	196 aa		3.09	□□□□□ -1.91
SQS1	YNL224C	SER2	P42941	309 aa		3.09	□□□□□ -1.91
SQS1	YNL224C	PMT5	P52867	743 aa		3.09	□□□□□ -1.91
SQS1	YNL224C	ASI2	P53895	289 aa		3.09	□□□□□ -1.91
SQS1	YNL224C	NUP49	Q02199	472 aa		3.09	□□□□□ -1.91
SQS1	YNL224C	OSH6	Q02201	448 aa		3.09	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 10 ms