RNA–Protein interactions for RNA: YNL039W

BDP1, Transcript of Essential subunit of RNA polymerase III transcription factor (TFIIIB), yeast

Gene BDP1, Length 1,785 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
BDP1	YNL039W	APC9	Q12107	265 aa		4.14	□□□□□ -1.75
BDP1	YNL039W	RGT2	Q12300	763 aa		4.14	□□□□□ -1.75
BDP1	YNL039W	ERP3	Q12403	225 aa		4.14	□□□□□ -1.75
BDP1	YNL039W	ADH2	P00331	348 aa	Known RBP	4.14	□□□□□ -1.75
BDP1	YNL039W	ATP6	P00854	259 aa		4.14	□□□□□ -1.75
BDP1	YNL039W	ATR1	P13090	542 aa		4.14	□□□□□ -1.75
BDP1	YNL039W	MER1	P16523	270 aa		4.14	□□□□□ -1.75
BDP1	YNL039W	PUT3	P25502	979 aa	Predicted RBP	4.14	□□□□□ -1.75
BDP1	YNL039W	PRR1	P28708	518 aa		4.14	□□□□□ -1.75
BDP1	YNL039W	MUD1	P32605	298 aa	Known RBP	4.14	□□□□□ -1.75
BDP1	YNL039W	PMU1	P36069	295 aa		4.14	□□□□□ -1.75
BDP1	YNL039W	YKL071W	P36086	256 aa		4.14	□□□□□ -1.75
BDP1	YNL039W	DTR1	P38125	572 aa		4.14	□□□□□ -1.75
BDP1	YNL039W	RTT101	P47050	842 aa		4.14	□□□□□ -1.75
BDP1	YNL039W	GIM3	P53900	129 aa		4.14	□□□□□ -1.75
BDP1	YNL039W	IRC4	Q03036	179 aa		4.14	□□□□□ -1.75
BDP1	YNL039W	YMR209C	Q03648	457 aa		4.14	□□□□□ -1.75
BDP1	YNL039W	HCR1	Q05775	265 aa	Known RBP	4.14	□□□□□ -1.75
BDP1	YNL039W	MDM36	Q06820	579 aa		4.14	□□□□□ -1.75
BDP1	YNL039W	CMS1	Q07897	291 aa	Known RBP	4.14	□□□□□ -1.75
BDP1	YNL039W	GIS3	Q12418	502 aa		4.14	□□□□□ -1.75
BDP1	YNL039W	RRT12	P25381	491 aa		4.13	□□□□□ -1.75
BDP1	YNL039W	SRB4	P32569	687 aa		4.13	□□□□□ -1.75
BDP1	YNL039W	ZRT1	P32804	376 aa		4.13	□□□□□ -1.75
BDP1	YNL039W	MTC4	P38335	694 aa	Known RBP	4.13	□□□□□ -1.75
BDP1	YNL039W	OST1	P41543	476 aa	Known RBP	4.13	□□□□□ -1.75
BDP1	YNL039W	YFL040W	P43562	540 aa		4.13	□□□□□ -1.75
BDP1	YNL039W	IBD2	P53892	351 aa		4.13	□□□□□ -1.75
BDP1	YNL039W	YLR283W	Q05867	314 aa		4.13	□□□□□ -1.75
BDP1	YNL039W	YOR029W	Q12243	111 aa		4.13	□□□□□ -1.75
BDP1	YNL039W	MRS3	P10566	314 aa		4.12	□□□□□ -1.75
BDP1	YNL039W	ZIP1	P31111	875 aa		4.12	□□□□□ -1.75
BDP1	YNL039W	SIP3	P38717	1229 aa		4.12	□□□□□ -1.75
BDP1	YNL039W	YHR035W	P38769	630 aa		4.12	□□□□□ -1.75
BDP1	YNL039W	COX14	P39103	70 aa		4.12	□□□□□ -1.75
BDP1	YNL039W	TES1	P41903	349 aa	Known RBP	4.12	□□□□□ -1.75
BDP1	YNL039W	RIM13	Q03792	727 aa		4.12	□□□□□ -1.75
BDP1	YNL039W	GTO3	Q04806	366 aa		4.12	□□□□□ -1.75
BDP1	YNL039W	PAM18	Q07914	168 aa		4.12	□□□□□ -1.75
BDP1	YNL039W	DSE3	Q08729	430 aa		4.12	□□□□□ -1.75
BDP1	YNL039W	YCR024C-B	Q3E7Z8	88 aa		4.12	□□□□□ -1.75
BDP1	YNL039W	RPL20A	P0CX23	172 aa	Known RBP	4.12	□□□□□ -1.75
BDP1	YNL039W	RPL20B	P0CX24	172 aa	Predicted RBP	4.12	□□□□□ -1.75
BDP1	YNL039W	DAL82	P21705	255 aa		4.12	□□□□□ -1.75
BDP1	YNL039W	RAD5	P32849	1169 aa	Predicted RBP	4.12	□□□□□ -1.75
BDP1	YNL039W	CAB3	P36076	571 aa		4.12	□□□□□ -1.75
BDP1	YNL039W	NAT2	P37293	288 aa		4.12	□□□□□ -1.75
BDP1	YNL039W	SMF2	P38778	549 aa		4.12	□□□□□ -1.75
BDP1	YNL039W	BIG1	P38813	335 aa		4.12	□□□□□ -1.75
BDP1	YNL039W	MTC6	P38849	526 aa		4.12	□□□□□ -1.75
BDP1	YNL039W	TDA11	P38854	504 aa		4.12	□□□□□ -1.75
BDP1	YNL039W	YIL169C	P40442	995 aa		4.12	□□□□□ -1.75
BDP1	YNL039W	YGR210C	P42942	411 aa		4.12	□□□□□ -1.75
BDP1	YNL039W	DIG1	Q03063	452 aa	Known RBP	4.12	□□□□□ -1.75
BDP1	YNL039W	ADH6	Q04894	360 aa	Known RBP	4.12	□□□□□ -1.75
BDP1	YNL039W	YLR281C	Q05863	155 aa		4.12	□□□□□ -1.75
BDP1	YNL039W	TSR1	Q07381	788 aa	Known RBP	4.12	□□□□□ -1.75
BDP1	YNL039W	LOT6	Q07923	191 aa		4.12	□□□□□ -1.75
BDP1	YNL039W	AYT1	Q12226	474 aa		4.12	□□□□□ -1.75
BDP1	YNL039W	JIP3	O13555	125 aa		4.11	□□□□□ -1.75
BDP1	YNL039W	TDH2	P00358	332 aa	Known RBP	4.11	□□□□□ -1.75
BDP1	YNL039W	HPR1	P17629	752 aa	Known RBP	4.11	□□□□□ -1.75
BDP1	YNL039W	MET16	P18408	261 aa	Predicted RBP	4.11	□□□□□ -1.75
BDP1	YNL039W	VPS1	P21576	704 aa	Known RBP	4.11	□□□□□ -1.75
BDP1	YNL039W	KAR9	P32526	644 aa		4.11	□□□□□ -1.75
BDP1	YNL039W	PRS4	P38063	326 aa	Predicted RBP	4.11	□□□□□ -1.75
BDP1	YNL039W	COA1	P40452	197 aa		4.11	□□□□□ -1.75
BDP1	YNL039W	YIL152W	P40455	235 aa		4.11	□□□□□ -1.75
BDP1	YNL039W	XBP1	P40489	647 aa		4.11	□□□□□ -1.75
BDP1	YNL039W	LSG1	P53145	640 aa	Known RBP	4.11	□□□□□ -1.75
BDP1	YNL039W	YPL077C	Q02831	240 aa		4.11	□□□□□ -1.75
BDP1	YNL039W	ERP1	Q05359	219 aa	Known RBP	4.11	□□□□□ -1.75
BDP1	YNL039W	SDO1	Q07953	250 aa	Known RBP	4.11	□□□□□ -1.75
BDP1	YNL039W	CDC36	P06100	191 aa	Predicted RBP	4.1	□□□□□ -1.75
BDP1	YNL039W	RNA14	P25298	677 aa	Known RBP	4.1	□□□□□ -1.75
BDP1	YNL039W	MEI5	P32489	222 aa		4.1	□□□□□ -1.75
BDP1	YNL039W	YBP1	P38315	674 aa		4.1	□□□□□ -1.75
BDP1	YNL039W	RPR2	P40571	144 aa		4.1	□□□□□ -1.75
BDP1	YNL039W	CTK3	P46963	296 aa	Predicted RBP	4.1	□□□□□ -1.75
BDP1	YNL039W	MRPL50	P53724	139 aa		4.1	□□□□□ -1.75
BDP1	YNL039W	GOR1	P53839	350 aa		4.1	□□□□□ -1.75
BDP1	YNL039W	ALG11	P53954	548 aa	Known RBP	4.1	□□□□□ -1.75
BDP1	YNL039W	MYO5	Q04439	1219 aa	Known RBP	4.1	□□□□□ -1.75
BDP1	YNL039W	PRM6	Q04705	352 aa		4.1	□□□□□ -1.75
BDP1	YNL039W	SSQ1	Q05931	657 aa	Predicted RBP	4.1	□□□□□ -1.75
BDP1	YNL039W	ASR1	Q06834	288 aa		4.1	□□□□□ -1.75
BDP1	YNL039W	YNL162W-A	Q3E7A8	72 aa		4.1	□□□□□ -1.75
BDP1	YNL039W	YOS9	Q99220	542 aa		4.1	□□□□□ -1.75
BDP1	YNL039W	PIS1	P06197	220 aa	Known RBP	4.09	□□□□□ -1.75
BDP1	YNL039W	HEM15	P16622	393 aa		4.09	□□□□□ -1.75
BDP1	YNL039W	RAD51	P25454	400 aa		4.09	□□□□□ -1.75
BDP1	YNL039W	AIM29	P36154	155 aa		4.09	□□□□□ -1.75
BDP1	YNL039W	PCI8	P40512	444 aa		4.09	□□□□□ -1.75
BDP1	YNL039W	DFG10	P40526	253 aa		4.09	□□□□□ -1.75
BDP1	YNL039W	RAD17	P48581	401 aa		4.09	□□□□□ -1.75
BDP1	YNL039W	MRM2	P53123	320 aa		4.09	□□□□□ -1.75
BDP1	YNL039W	KTR6	P54070	446 aa		4.09	□□□□□ -1.75
BDP1	YNL039W	MRPS17	Q03246	237 aa	Predicted RBP	4.09	□□□□□ -1.75
BDP1	YNL039W	FMP42	Q04991	504 aa		4.09	□□□□□ -1.75
BDP1	YNL039W	THP3	Q12049	470 aa	Known RBP	4.09	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 48.8 ms