RNA–Protein interactions for RNA: YMR224C

MRE11, Transcript of Nuclease subunit of the MRX complex with Rad50p and Xrs2p, yeastyeast

Gene MRE11, Length 2,079 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MRE11YMR224C PAM18Q07914 168 aa4.6□□□□□ -1.67
MRE11YMR224C BNR1P40450 1375 aa4.6□□□□□ -1.67
MRE11YMR224C ASF2P32448 525 aaPredicted RBP4.6□□□□□ -1.67
MRE11YMR224C YPT35P38815 214 aaKnown RBP4.6□□□□□ -1.67
MRE11YMR224C RTT101P47050 842 aa4.6□□□□□ -1.67
MRE11YMR224C RPM2Q02773 1202 aa4.6□□□□□ -1.67
MRE11YMR224C SDO1Q07953 250 aaKnown RBP4.6□□□□□ -1.67
MRE11YMR224C CLP1Q08685 445 aaPredicted RBP4.6□□□□□ -1.67
MRE11YMR224C RGT2Q12300 763 aa4.6□□□□□ -1.67
MRE11YMR224C ERP3Q12403 225 aa4.6□□□□□ -1.67
MRE11YMR224C PRS4P38063 326 aaPredicted RBP4.59□□□□□ -1.67
MRE11YMR224C YER034WP40022 185 aaKnown RBP4.59□□□□□ -1.67
MRE11YMR224C YGR210CP42942 411 aa4.59□□□□□ -1.67
MRE11YMR224C TRM112P53738 135 aaPredicted RBP4.59□□□□□ -1.67
MRE11YMR224C SNX3Q08826 162 aaKnown RBP4.59□□□□□ -1.67
MRE11YMR224C APC9Q12107 265 aa4.59□□□□□ -1.67
MRE11YMR224C CSR2Q12734 1121 aa4.59□□□□□ -1.67
MRE11YMR224C YOS9Q99220 542 aa4.59□□□□□ -1.67
MRE11YMR224C MET16P18408 261 aaPredicted RBP4.58□□□□□ -1.68
MRE11YMR224C DAL82P21705 255 aa4.58□□□□□ -1.68
MRE11YMR224C YCP4P25349 247 aaKnown RBP4.58□□□□□ -1.68
MRE11YMR224C ITR2P30606 609 aa4.58□□□□□ -1.68
MRE11YMR224C PHA2P32452 334 aa4.58□□□□□ -1.68
MRE11YMR224C MGM101P32787 269 aaKnown RBP4.58□□□□□ -1.68
MRE11YMR224C AIM29P36154 155 aa4.58□□□□□ -1.68
MRE11YMR224C YBR137WP38276 179 aa4.58□□□□□ -1.68
MRE11YMR224C JLP2P40206 208 aa4.58□□□□□ -1.68
MRE11YMR224C COA1P40452 197 aa4.58□□□□□ -1.68
MRE11YMR224C IKS1P47042 667 aa4.58□□□□□ -1.68
MRE11YMR224C IRC4Q03036 179 aa4.58□□□□□ -1.68
MRE11YMR224C ADH6Q04894 360 aaKnown RBP4.58□□□□□ -1.68
MRE11YMR224C HPR1P17629 752 aaKnown RBP4.58□□□□□ -1.68
MRE11YMR224C VPS1P21576 704 aaKnown RBP4.58□□□□□ -1.68
MRE11YMR224C RIB5P38145 238 aa4.58□□□□□ -1.68
MRE11YMR224C SMF2P38778 549 aa4.58□□□□□ -1.68
MRE11YMR224C CAF40P53829 373 aa4.58□□□□□ -1.68
MRE11YMR224C ENT5Q03769 411 aaKnown RBP4.58□□□□□ -1.68
MRE11YMR224C MDM36Q06820 579 aa4.58□□□□□ -1.68
MRE11YMR224C MEX67Q99257 599 aaKnown RBP4.58□□□□□ -1.68
MRE11YMR224C MATALPHA1P0CY06 175 aa4.57□□□□□ -1.68
MRE11YMR224C HMLALPHA1P0CY07 175 aa4.57□□□□□ -1.68
MRE11YMR224C ZRT1P32804 376 aa4.57□□□□□ -1.68
MRE11YMR224C PTR2P32901 601 aa4.57□□□□□ -1.68
MRE11YMR224C ALG8P40351 577 aa4.57□□□□□ -1.68
MRE11YMR224C DIM1P41819 318 aaKnown RBP4.57□□□□□ -1.68
MRE11YMR224C YJR030CP47101 745 aa4.57□□□□□ -1.68
MRE11YMR224C YFL068WP0CX99 160 aa4.57□□□□□ -1.68
MRE11YMR224C YLL066W-AP0CY00 160 aa4.57□□□□□ -1.68
MRE11YMR224C YLL067W-AP0CY01 160 aa4.57□□□□□ -1.68
MRE11YMR224C RPS5P26783 225 aaKnown RBP4.57□□□□□ -1.68
MRE11YMR224C MUD1P32605 298 aaKnown RBP4.57□□□□□ -1.68
MRE11YMR224C YHR035WP38769 630 aa4.57□□□□□ -1.68
MRE11YMR224C MRPL50P53724 139 aa4.57□□□□□ -1.68
MRE11YMR224C ALG11P53954 548 aaKnown RBP4.57□□□□□ -1.68
MRE11YMR224C DIB1Q06819 143 aaPredicted RBP4.57□□□□□ -1.68
MRE11YMR224C SMC5Q08204 1093 aa4.57□□□□□ -1.68
MRE11YMR224C FUS3P16892 353 aaKnown RBP4.56□□□□□ -1.68
MRE11YMR224C MEI5P32489 222 aa4.56□□□□□ -1.68
MRE11YMR224C NDC1P32500 655 aa4.56□□□□□ -1.68
MRE11YMR224C MIX23P38162 196 aa4.56□□□□□ -1.68
MRE11YMR224C LSG1P53145 640 aaKnown RBP4.56□□□□□ -1.68
MRE11YMR224C NOP13P53883 403 aaKnown RBP RIP-Chip data4.56□□□□□ -1.68not detected
MRE11YMR224C HEM15P16622 393 aa4.55□□□□□ -1.68
MRE11YMR224C DAL81P21657 970 aa4.55□□□□□ -1.68
MRE11YMR224C LDB7P38210 180 aa4.55□□□□□ -1.68
MRE11YMR224C IRC24P40580 263 aa4.55□□□□□ -1.68
MRE11YMR224C TES1P41903 349 aaKnown RBP4.55□□□□□ -1.68
MRE11YMR224C YPL077CQ02831 240 aa4.55□□□□□ -1.68
MRE11YMR224C ASR1Q06834 288 aa4.55□□□□□ -1.68
MRE11YMR224C MSH5Q12175 901 aa4.55□□□□□ -1.68
MRE11YMR224C YBL111CQ3E7Y5 667 aa4.55□□□□□ -1.68
MRE11YMR224C TDA11P38854 504 aa4.55□□□□□ -1.68
MRE11YMR224C YIL169CP40442 995 aa4.55□□□□□ -1.68
MRE11YMR224C OST1P41543 476 aaKnown RBP4.55□□□□□ -1.68
MRE11YMR224C CTK3P46963 296 aaPredicted RBP4.55□□□□□ -1.68
MRE11YMR224C SNZ1Q03148 297 aa4.55□□□□□ -1.68
MRE11YMR224C HCR1Q05775 265 aaKnown RBP4.55□□□□□ -1.68
MRE11YMR224C GRS2Q06817 618 aa4.55□□□□□ -1.68
MRE11YMR224C NDE2Q07500 545 aa4.55□□□□□ -1.68
MRE11YMR224C RPL31AP0C2H8 113 aaKnown RBP4.54□□□□□ -1.68
MRE11YMR224C PTP1P25044 335 aa4.54□□□□□ -1.68
MRE11YMR224C NUP2P32499 720 aa4.54□□□□□ -1.68
MRE11YMR224C KAR9P32526 644 aa4.54□□□□□ -1.68
MRE11YMR224C PMU1P36069 295 aa4.54□□□□□ -1.68
MRE11YMR224C HIT1P46973 164 aa4.54□□□□□ -1.68
MRE11YMR224C MDV1P47025 714 aa4.54□□□□□ -1.68
MRE11YMR224C TIS11P47977 285 aa4.54□□□□□ -1.68
MRE11YMR224C BNA7Q04066 261 aa4.54□□□□□ -1.68
MRE11YMR224C YCR024C-BQ3E7Z8 88 aa4.54□□□□□ -1.68
MRE11YMR224C SAL1D6W196 494 aa4.53□□□□□ -1.68
MRE11YMR224C MRP1P10662 321 aaKnown RBP4.53□□□□□ -1.68
MRE11YMR224C ATR1P13090 542 aa4.53□□□□□ -1.68
MRE11YMR224C MTF1P14908 341 aaKnown RBP4.53□□□□□ -1.68
MRE11YMR224C PBN1P25580 416 aa4.53□□□□□ -1.68
MRE11YMR224C PPA2P28239 310 aa4.53□□□□□ -1.68
MRE11YMR224C YKL063CP35725 167 aa4.53□□□□□ -1.68
MRE11YMR224C MTC4P38335 694 aaKnown RBP4.53□□□□□ -1.68
MRE11YMR224C COX14P39103 70 aa4.53□□□□□ -1.68
MRE11YMR224C OST6Q03723 332 aa4.53□□□□□ -1.68
MRE11YMR224C KRE28Q04431 385 aa4.53□□□□□ -1.68
Retrieved 100 of 5,963 RNA–protein pairs in 19.8 ms