RNA–Protein interactions for RNA: YLR087C

CSF1, Transcript of Protein required for fermentation at low temperature, yeastyeast

Gene CSF1, Length 8,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSF1YLR087C SNN1P48232 102 aa2.2□□□□□ -2.06
CSF1YLR087C PCL10P53124 433 aa2.2□□□□□ -2.06
CSF1YLR087C NDE2Q07500 545 aa2.2□□□□□ -2.06
CSF1YLR087C PRM4Q12498 284 aa2.2□□□□□ -2.06
CSF1YLR087C SEM1O94742 89 aa2.2□□□□□ -2.06
CSF1YLR087C MRPL44P19956 98 aa2.2□□□□□ -2.06
CSF1YLR087C SOL2P37262 315 aa2.2□□□□□ -2.06
CSF1YLR087C CIN1P40987 1014 aa2.2□□□□□ -2.06
CSF1YLR087C XPT1P47165 209 aa2.2□□□□□ -2.06
CSF1YLR087C AIF1P52923 378 aa2.2□□□□□ -2.06
CSF1YLR087C YGL082WP53155 381 aa2.2□□□□□ -2.06
CSF1YLR087C COQ6P53318 479 aa2.2□□□□□ -2.06
CSF1YLR087C AAH1P53909 347 aa2.2□□□□□ -2.06
CSF1YLR087C YLR446WQ06204 433 aa2.2□□□□□ -2.06
CSF1YLR087C DXO1Q06349 442 aa2.2□□□□□ -2.06
CSF1YLR087C RAX1Q08760 435 aa2.2□□□□□ -2.06
CSF1YLR087C FCF2Q12035 217 aaPredicted RBP2.2□□□□□ -2.06
CSF1YLR087C MLH3Q12083 715 aa2.2□□□□□ -2.06
CSF1YLR087C CDC9P04819 755 aa2.19□□□□□ -2.06
CSF1YLR087C RHO1P06780 209 aaKnown RBP2.19□□□□□ -2.06
CSF1YLR087C MRPL33P20084 86 aa2.19□□□□□ -2.06
CSF1YLR087C MGR1P25573 417 aa2.19□□□□□ -2.06
CSF1YLR087C YIM1P28625 365 aa2.19□□□□□ -2.06
CSF1YLR087C COQ2P32378 372 aa2.19□□□□□ -2.06
CSF1YLR087C YKL187CP34231 750 aa2.19□□□□□ -2.06
CSF1YLR087C ALY1P36117 915 aa2.19□□□□□ -2.06
CSF1YLR087C ELO3P40319 345 aa2.19□□□□□ -2.06
CSF1YLR087C MSS2P40990 351 aa2.19□□□□□ -2.06
CSF1YLR087C SCD6P45978 349 aaKnown RBP RIP-Chip data2.19□□□□□ -2.06 RIP-Chip
CSF1YLR087C UFD1P53044 361 aa2.19□□□□□ -2.06
CSF1YLR087C AQR1P53943 586 aa2.19□□□□□ -2.06
CSF1YLR087C YMR090WQ04304 227 aaKnown RBP2.19□□□□□ -2.06
CSF1YLR087C FAS1P07149 2051 aaKnown RBP2.19□□□□□ -2.06
CSF1YLR087C RPL28P02406 149 aaKnown RBP2.19□□□□□ -2.06
CSF1YLR087C MAK32P23060 363 aa2.19□□□□□ -2.06
CSF1YLR087C MEK1P24719 497 aaPredicted RBP2.19□□□□□ -2.06
CSF1YLR087C FRE2P36033 711 aa2.19□□□□□ -2.06
CSF1YLR087C SBE22P38814 852 aa2.19□□□□□ -2.06
CSF1YLR087C VAC8P39968 578 aa2.19□□□□□ -2.06
CSF1YLR087C YPL014WQ02606 381 aa2.19□□□□□ -2.06
CSF1YLR087C YML131WQ03102 365 aa2.19□□□□□ -2.06
CSF1YLR087C SEI1Q06058 285 aa2.19□□□□□ -2.06
CSF1YLR087C AHA1Q12449 350 aaKnown RBP2.19□□□□□ -2.06
CSF1YLR087C HRP1Q99383 534 aaKnown RBP2.19□□□□□ -2.06
CSF1YLR087C TIR1P10863 254 aa2.19□□□□□ -2.06
CSF1YLR087C ATR1P13090 542 aa2.19□□□□□ -2.06
CSF1YLR087C ACO1P19414 778 aaKnown RBP RIP-Chip data2.19□□□□□ -2.06not detected
CSF1YLR087C EXG1P23776 448 aaKnown RBP2.19□□□□□ -2.06
CSF1YLR087C SRY1P36007 326 aa2.19□□□□□ -2.06
CSF1YLR087C RPF2P36160 344 aaKnown RBP2.19□□□□□ -2.06
CSF1YLR087C PGD1P40356 397 aa2.19□□□□□ -2.06
CSF1YLR087C AIM23P47015 356 aa2.19□□□□□ -2.06
CSF1YLR087C AIM22P47051 409 aa2.19□□□□□ -2.06
CSF1YLR087C TTI2P47168 421 aa2.19□□□□□ -2.06
CSF1YLR087C BRR6P53062 197 aa2.19□□□□□ -2.06
CSF1YLR087C YGR250CP53316 781 aaKnown RBP2.19□□□□□ -2.06
CSF1YLR087C ELC1Q03071 99 aa2.19□□□□□ -2.06
CSF1YLR087C YMR187CQ03236 431 aa2.19□□□□□ -2.06
CSF1YLR087C ADH6Q04894 360 aaKnown RBP2.19□□□□□ -2.06
CSF1YLR087C DFG5Q05031 458 aa2.19□□□□□ -2.06
CSF1YLR087C GEP5Q12393 293 aa2.19□□□□□ -2.06
CSF1YLR087C APA1P16550 321 aaKnown RBP2.19□□□□□ -2.06
CSF1YLR087C SAC7P17121 654 aa2.19□□□□□ -2.06
CSF1YLR087C VID24P38263 362 aa2.19□□□□□ -2.06
CSF1YLR087C POP4P38336 279 aa2.19□□□□□ -2.06
CSF1YLR087C NEM1P38757 446 aa2.19□□□□□ -2.06
CSF1YLR087C LTP1P40347 161 aa2.19□□□□□ -2.06
CSF1YLR087C AIM11P87275 137 aa2.19□□□□□ -2.06
CSF1YLR087C MRP51Q02950 344 aa2.19□□□□□ -2.06
CSF1YLR087C CTL1Q03220 320 aaKnown RBP2.19□□□□□ -2.06
CSF1YLR087C YMR320WQ04897 101 aa2.19□□□□□ -2.06
CSF1YLR087C BNA5Q05979 453 aa2.19□□□□□ -2.06
CSF1YLR087C ATG10Q07879 167 aa2.19□□□□□ -2.06
CSF1YLR087C YOR342CQ12182 319 aa2.19□□□□□ -2.06
CSF1YLR087C YPR014CQ6B0W2 109 aa2.19□□□□□ -2.06
CSF1YLR087C COBP00163 385 aa2.19□□□□□ -2.06
CSF1YLR087C TRP3P00937 484 aa2.19□□□□□ -2.06
CSF1YLR087C SSA3P09435 649 aaKnown RBP2.19□□□□□ -2.06
CSF1YLR087C AAR2P32357 355 aaPredicted RBP2.19□□□□□ -2.06
CSF1YLR087C MSN2P33748 704 aa2.19□□□□□ -2.06
CSF1YLR087C SWD2P36104 329 aaPredicted RBP2.19□□□□□ -2.06
CSF1YLR087C EXO5P38289 585 aa2.19□□□□□ -2.06
CSF1YLR087C ICP55P40051 511 aa2.19□□□□□ -2.06
CSF1YLR087C RAI1P53063 387 aaKnown RBP2.19□□□□□ -2.06
CSF1YLR087C RNY1Q02933 434 aaKnown RBP2.19□□□□□ -2.06
CSF1YLR087C YML018CQ03730 393 aa2.19□□□□□ -2.06
CSF1YLR087C SNO4Q04902 237 aa2.19□□□□□ -2.06
CSF1YLR087C MRX8Q05473 314 aa2.19□□□□□ -2.06
CSF1YLR087C HRD3Q05787 833 aa2.19□□□□□ -2.06
CSF1YLR087C PIN3Q06449 215 aa2.19□□□□□ -2.06
CSF1YLR087C MRX9Q07349 420 aaKnown RBP2.19□□□□□ -2.06
CSF1YLR087C HRK1Q08732 759 aaKnown RBP2.19□□□□□ -2.06
CSF1YLR087C HSP32Q08992 237 aa2.19□□□□□ -2.06
CSF1YLR087C BCY1P07278 416 aaKnown RBP2.19□□□□□ -2.06
CSF1YLR087C DFR1P07807 211 aaKnown RBP RIP-Chip data2.19□□□□□ -2.06not detected
CSF1YLR087C KNS1P32350 737 aaPredicted RBP2.19□□□□□ -2.06
CSF1YLR087C YGR201CP42936 225 aa2.19□□□□□ -2.06
CSF1YLR087C RMD9P53140 646 aaKnown RBP2.19□□□□□ -2.06
CSF1YLR087C GEP3Q08622 556 aa2.19□□□□□ -2.06
CSF1YLR087C SME1Q12330 94 aaPredicted RBP2.19□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 10.5 ms