RNA–Protein interactions for RNA: YJL104W

PAM16, Transcript of Subunit of the import motor (PAM complex), yeast

Gene PAM16, Length 450 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PAM16	YJL104W	OM14	P38325	134 aa		0.89	□□□□□ -2.27
PAM16	YJL104W	MMS21	P38632	267 aa		0.89	□□□□□ -2.27
PAM16	YJL104W	GRE3	P38715	327 aa	Known RBP RIP-Chip data	0.89	□□□□□ -2.27	not detected
PAM16	YJL104W	MNL1	P38888	796 aa		0.89	□□□□□ -2.27
PAM16	YJL104W	EDC3	P39998	551 aa	Known RBP	0.89	□□□□□ -2.27
PAM16	YJL104W	YER121W	P40076	114 aa		0.89	□□□□□ -2.27
PAM16	YJL104W	SOK1	P40317	901 aa		0.89	□□□□□ -2.27
PAM16	YJL104W	SPO22	P40511	975 aa		0.89	□□□□□ -2.27
PAM16	YJL104W	CAK1	P43568	368 aa	Predicted RBP	0.89	□□□□□ -2.27
PAM16	YJL104W	PTR3	P43606	678 aa		0.89	□□□□□ -2.27
PAM16	YJL104W	YHC3	P47040	408 aa		0.89	□□□□□ -2.27
PAM16	YJL104W	MDE1	P47095	244 aa		0.89	□□□□□ -2.27
PAM16	YJL104W	ABM1	P47146	123 aa		0.89	□□□□□ -2.27
PAM16	YJL104W	YJR141W	P47172	347 aa	Predicted RBP	0.89	□□□□□ -2.27
PAM16	YJL104W	TCB2	P48231	1178 aa		0.89	□□□□□ -2.27
PAM16	YJL104W	NBP1	P52919	319 aa	Predicted RBP	0.89	□□□□□ -2.27
PAM16	YJL104W	DUO1	P53168	247 aa	Known RBP	0.89	□□□□□ -2.27
PAM16	YJL104W	OSH6	Q02201	448 aa		0.89	□□□□□ -2.27
PAM16	YJL104W	YDR131C	Q03899	556 aa		0.89	□□□□□ -2.27
PAM16	YJL104W	RPN9	Q04062	393 aa	Known RBP	0.89	□□□□□ -2.27
PAM16	YJL104W	MIX14	Q04341	121 aa		0.89	□□□□□ -2.27
PAM16	YJL104W	YLR446W	Q06204	433 aa		0.89	□□□□□ -2.27
PAM16	YJL104W	RLP24	Q07915	199 aa	Known RBP	0.89	□□□□□ -2.27
PAM16	YJL104W	AAD15	Q08361	143 aa		0.89	□□□□□ -2.27
PAM16	YJL104W	YOR365C	Q08844	703 aa		0.89	□□□□□ -2.27
PAM16	YJL104W	NUS1	Q12063	375 aa		0.89	□□□□□ -2.27
PAM16	YJL104W	YOL107W	Q12239	342 aa		0.89	□□□□□ -2.27
PAM16	YJL104W	HSH49	Q99181	213 aa	Predicted RBP	0.89	□□□□□ -2.27
PAM16	YJL104W	AFI1	Q99222	893 aa		0.89	□□□□□ -2.27
PAM16	YJL104W	FLO9	P39712	1322 aa		0.89	□□□□□ -2.27
PAM16	YJL104W	REP1	P03871	373 aa		0.88	□□□□□ -2.27
PAM16	YJL104W	ILV5	P06168	395 aa	Known RBP	0.88	□□□□□ -2.27
PAM16	YJL104W	RAD52	P06778	471 aa	Known RBP	0.88	□□□□□ -2.27
PAM16	YJL104W	GAL7	P08431	366 aa		0.88	□□□□□ -2.27
PAM16	YJL104W	YSF3	P0C074	85 aa	Predicted RBP	0.88	□□□□□ -2.27
PAM16	YJL104W	RPL35A	P0CX84	120 aa	Known RBP	0.88	□□□□□ -2.27
PAM16	YJL104W	RPL35B	P0CX85	120 aa	Known RBP	0.88	□□□□□ -2.27
PAM16	YJL104W	RSR1	P13856	272 aa		0.88	□□□□□ -2.27
PAM16	YJL104W	HSC82	P15108	705 aa	Known RBP	0.88	□□□□□ -2.27
PAM16	YJL104W	PHO84	P25297	587 aa	Known RBP	0.88	□□□□□ -2.27
PAM16	YJL104W	PDB1	P32473	366 aa	Known RBP	0.88	□□□□□ -2.27
PAM16	YJL104W	TCA17	P32613	152 aa		0.88	□□□□□ -2.27
PAM16	YJL104W	NRP1	P32770	719 aa	Known RBP RIP-Chip data	0.88	□□□□□ -2.27	not detected
PAM16	YJL104W	GYP6	P32806	458 aa		0.88	□□□□□ -2.27
PAM16	YJL104W	MRPS5	P33759	307 aa		0.88	□□□□□ -2.27
PAM16	YJL104W	VPS51	P36116	164 aa		0.88	□□□□□ -2.27
PAM16	YJL104W	PCH2	P38126	564 aa		0.88	□□□□□ -2.27
PAM16	YJL104W	YGP1	P38616	354 aa	Known RBP	0.88	□□□□□ -2.27
PAM16	YJL104W	YHI9	P38765	294 aa		0.88	□□□□□ -2.27
PAM16	YJL104W	YDR089W	P38966	869 aa		0.88	□□□□□ -2.27
PAM16	YJL104W	SMC2	P38989	1170 aa	Known RBP	0.88	□□□□□ -2.27
PAM16	YJL104W	PRP39	P39682	629 aa	Known RBP	0.88	□□□□□ -2.27
PAM16	YJL104W	AIM10	P39965	576 aa	Known RBP	0.88	□□□□□ -2.27
PAM16	YJL104W	YEL028W	P39989	153 aa		0.88	□□□□□ -2.27
PAM16	YJL104W	GAT2	P40209	560 aa		0.88	□□□□□ -2.27
PAM16	YJL104W	AVT7	P40501	490 aa		0.88	□□□□□ -2.27
PAM16	YJL104W	OST1	P41543	476 aa	Known RBP	0.88	□□□□□ -2.27
PAM16	YJL104W	SEC27	P41811	889 aa	Known RBP	0.88	□□□□□ -2.27
PAM16	YJL104W	TOS3	P43637	560 aa		0.88	□□□□□ -2.27
PAM16	YJL104W	PIL1	P53252	339 aa	Known RBP	0.88	□□□□□ -2.27
PAM16	YJL104W	YGR127W	P53275	312 aa		0.88	□□□□□ -2.27
PAM16	YJL104W	OGG1	P53397	376 aa	Predicted RBP	0.88	□□□□□ -2.27
PAM16	YJL104W	YNL247W	P53852	767 aa	Known RBP	0.88	□□□□□ -2.27
PAM16	YJL104W	REG1	Q00816	1014 aa		0.88	□□□□□ -2.27
PAM16	YJL104W	ENT5	Q03769	411 aa	Known RBP	0.88	□□□□□ -2.27
PAM16	YJL104W	DPB4	Q04603	196 aa	Known RBP	0.88	□□□□□ -2.27
PAM16	YJL104W	RBS1	Q05672	457 aa	Known RBP	0.88	□□□□□ -2.27
PAM16	YJL104W	BLS1	Q06071	122 aa		0.88	□□□□□ -2.27
PAM16	YJL104W	COG4	Q06096	861 aa		0.88	□□□□□ -2.27
PAM16	YJL104W	GAS2	Q06135	555 aa		0.88	□□□□□ -2.27
PAM16	YJL104W	BOP2	Q06150	570 aa		0.88	□□□□□ -2.27
PAM16	YJL104W	PSR1	Q07800	427 aa		0.88	□□□□□ -2.27
PAM16	YJL104W	CMS1	Q07897	291 aa	Known RBP	0.88	□□□□□ -2.27
PAM16	YJL104W	YLR036C	Q07986	203 aa		0.88	□□□□□ -2.27
PAM16	YJL104W	PSK2	Q08217	1101 aa		0.88	□□□□□ -2.27
PAM16	YJL104W	UIP4	Q08926	304 aa		0.88	□□□□□ -2.27
PAM16	YJL104W	VPS54	Q12071	889 aa		0.88	□□□□□ -2.27
PAM16	YJL104W	EMP46	Q12396	444 aa		0.88	□□□□□ -2.27
PAM16	YJL104W	PRP46	Q12417	451 aa	Predicted RBP	0.88	□□□□□ -2.27
PAM16	YJL104W	YOS9	Q99220	542 aa		0.88	□□□□□ -2.27
PAM16	YJL104W	UBR1	P19812	1950 aa		0.88	□□□□□ -2.27
PAM16	YJL104W	MDN1	Q12019	4910 aa	Known RBP	0.87	□□□□□ -2.27
PAM16	YJL104W	SLH1	P53327	1967 aa	Known RBP	0.87	□□□□□ -2.27
PAM16	YJL104W	LEU4	P06208	619 aa	Known RBP	0.87	□□□□□ -2.27
PAM16	YJL104W	CBP6	P07253	162 aa	Predicted RBP	0.87	□□□□□ -2.27
PAM16	YJL104W	YJL197C-A	P0C5P0	93 aa		0.87	□□□□□ -2.27
PAM16	YJL104W	YHR214C-D	P0CX93	97 aa		0.87	□□□□□ -2.27
PAM16	YJL104W	CTA1	P15202	515 aa		0.87	□□□□□ -2.27
PAM16	YJL104W	PDX1	P16451	410 aa		0.87	□□□□□ -2.27
PAM16	YJL104W	DAP2	P18962	818 aa		0.87	□□□□□ -2.27
PAM16	YJL104W	TAH1	P25638	111 aa	Predicted RBP	0.87	□□□□□ -2.27
PAM16	YJL104W	ADE1	P27616	306 aa		0.87	□□□□□ -2.27
PAM16	YJL104W	FAA1	P30624	700 aa	Known RBP	0.87	□□□□□ -2.27
PAM16	YJL104W	ATP11	P32453	318 aa		0.87	□□□□□ -2.27
PAM16	YJL104W	SSE1	P32589	693 aa	Known RBP	0.87	□□□□□ -2.27
PAM16	YJL104W	YEF1	P32622	495 aa		0.87	□□□□□ -2.27
PAM16	YJL104W	YPT52	P36018	234 aa	Known RBP	0.87	□□□□□ -2.27
PAM16	YJL104W	TPO5	P36029	618 aa		0.87	□□□□□ -2.27
PAM16	YJL104W	YSW1	P38280	609 aa		0.87	□□□□□ -2.27
PAM16	YJL104W	YBR220C	P38318	560 aa		0.87	□□□□□ -2.27

Retrieved 100 of 5,963 RNA–protein pairs in 16 ms