RNA–Protein interactions for RNA: YJL041W

NSP1, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NSP1, Length 2,472 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NSP1YJL041W YGL159WP53110 370 aa3.31□□□□□ -1.88
NSP1YJL041W YGR127WP53275 312 aa3.31□□□□□ -1.88
NSP1YJL041W IDP3P53982 420 aaKnown RBP3.31□□□□□ -1.88
NSP1YJL041W UME1Q03010 460 aa3.31□□□□□ -1.88
NSP1YJL041W PPN1Q04119 674 aa3.31□□□□□ -1.88
NSP1YJL041W CUE4Q04201 117 aaPredicted RBP3.31□□□□□ -1.88
NSP1YJL041W YMR130WQ04223 302 aa3.31□□□□□ -1.88
NSP1YJL041W TMA10Q06177 86 aa3.31□□□□□ -1.88
NSP1YJL041W IPK1Q06667 281 aa3.31□□□□□ -1.88
NSP1YJL041W AAD4Q07747 329 aa3.31□□□□□ -1.88
NSP1YJL041W LDB18Q07887 179 aa3.31□□□□□ -1.88
NSP1YJL041W YOR378WQ08902 515 aa3.31□□□□□ -1.88
NSP1YJL041W YPR202WQ08993 238 aa3.31□□□□□ -1.88
NSP1YJL041W SFM1Q12314 213 aa3.31□□□□□ -1.88
NSP1YJL041W BCY1P07278 416 aaKnown RBP3.3□□□□□ -1.88
NSP1YJL041W YFR010W-AP0C5N0 62 aa3.3□□□□□ -1.88
NSP1YJL041W TCP1P12612 559 aaKnown RBP3.3□□□□□ -1.88
NSP1YJL041W PHO81P17442 1178 aa3.3□□□□□ -1.88
NSP1YJL041W PHO80P20052 293 aa3.3□□□□□ -1.88
NSP1YJL041W PHO91P27514 894 aa3.3□□□□□ -1.88
NSP1YJL041W WBP1P33767 430 aaKnown RBP3.3□□□□□ -1.88
NSP1YJL041W EMC3P36039 253 aa3.3□□□□□ -1.88
NSP1YJL041W YKL075CP36083 450 aa3.3□□□□□ -1.88
NSP1YJL041W RRP4P38792 359 aaKnown RBP3.3□□□□□ -1.88
NSP1YJL041W PRP39P39682 629 aaKnown RBP3.3□□□□□ -1.88
NSP1YJL041W YEL020CP39994 560 aa3.3□□□□□ -1.88
NSP1YJL041W GLR1P41921 483 aaKnown RBP3.3□□□□□ -1.88
NSP1YJL041W PRM10P42946 383 aa3.3□□□□□ -1.88
NSP1YJL041W YJR056CP47115 236 aa3.3□□□□□ -1.88
NSP1YJL041W YNL095CP53932 642 aa3.3□□□□□ -1.88
NSP1YJL041W RSM10Q03201 203 aa3.3□□□□□ -1.88
NSP1YJL041W CSM3Q04659 317 aa3.3□□□□□ -1.88
NSP1YJL041W YLR413WQ06689 675 aa3.3□□□□□ -1.88
NSP1YJL041W PRP11Q07350 266 aaPredicted RBP3.3□□□□□ -1.88
NSP1YJL041W FDH1Q08911 376 aa3.3□□□□□ -1.88
NSP1YJL041W GET3Q12154 354 aaKnown RBP3.3□□□□□ -1.88
NSP1YJL041W LEU9Q12166 604 aaKnown RBP3.3□□□□□ -1.88
NSP1YJL041W YLR108CQ12259 485 aa3.3□□□□□ -1.88
NSP1YJL041W YIL177CP40434 1758 aa3.3□□□□□ -1.88
NSP1YJL041W YJL225CP40889 1758 aa3.3□□□□□ -1.88
NSP1YJL041W ALG7P07286 448 aa3.3□□□□□ -1.88
NSP1YJL041W YER190C-BP0CX94 160 aa3.3□□□□□ -1.88
NSP1YJL041W YEL077W-AP0CX95 160 aa3.3□□□□□ -1.88
NSP1YJL041W YGR296C-BP0CX96 160 aa3.3□□□□□ -1.88
NSP1YJL041W YPL283W-BP0CX97 160 aa3.3□□□□□ -1.88
NSP1YJL041W YPR204C-AP0CX98 160 aa3.3□□□□□ -1.88
NSP1YJL041W SUA7P29055 345 aaPredicted RBP3.3□□□□□ -1.88
NSP1YJL041W SNC1P31109 117 aa3.3□□□□□ -1.88
NSP1YJL041W YEF1P32622 495 aa3.3□□□□□ -1.88
NSP1YJL041W SOL2P37262 315 aa3.3□□□□□ -1.88
NSP1YJL041W APE3P37302 537 aaKnown RBP3.3□□□□□ -1.88
NSP1YJL041W GPX2P38143 162 aa3.3□□□□□ -1.88
NSP1YJL041W HIS2P38635 335 aa3.3□□□□□ -1.88
NSP1YJL041W WSS1P38838 269 aa3.3□□□□□ -1.88
NSP1YJL041W YER158CP40095 573 aa3.3□□□□□ -1.88
NSP1YJL041W YKE4P40544 346 aa3.3□□□□□ -1.88
NSP1YJL041W OPT1P40897 799 aa3.3□□□□□ -1.88
NSP1YJL041W GLC8P41818 229 aa3.3□□□□□ -1.88
NSP1YJL041W SSY5P47002 699 aa3.3□□□□□ -1.88
NSP1YJL041W NUP57P48837 541 aa3.3□□□□□ -1.88
NSP1YJL041W DIA3P52290 468 aa3.3□□□□□ -1.88
NSP1YJL041W AIF1P52923 378 aa3.3□□□□□ -1.88
NSP1YJL041W RIM8P53179 542 aa3.3□□□□□ -1.88
NSP1YJL041W YGL039WP53183 348 aaKnown RBP3.3□□□□□ -1.88
NSP1YJL041W RPN14P53196 417 aa3.3□□□□□ -1.88
NSP1YJL041W GPI1P53306 609 aa3.3□□□□□ -1.88
NSP1YJL041W COQ6P53318 479 aa3.3□□□□□ -1.88
NSP1YJL041W ALO1P54783 526 aaKnown RBP3.3□□□□□ -1.88
NSP1YJL041W ECM9Q02202 377 aa3.3□□□□□ -1.88
NSP1YJL041W TVP15Q03860 143 aa3.3□□□□□ -1.88
NSP1YJL041W YLR224WQ05947 369 aa3.3□□□□□ -1.88
NSP1YJL041W PIN3Q06449 215 aa3.3□□□□□ -1.88
NSP1YJL041W AFT2Q08957 416 aa3.3□□□□□ -1.88
NSP1YJL041W YLR099W-AQ3E798 87 aa3.3□□□□□ -1.88
NSP1YJL041W ARO3P14843 370 aaKnown RBP3.29□□□□□ -1.88
NSP1YJL041W IDH2P28241 369 aaKnown RBP3.29□□□□□ -1.88
NSP1YJL041W MDH3P32419 343 aaKnown RBP RIP-Chip data3.29□□□□□ -1.88not detected
NSP1YJL041W RGT1P32862 1170 aa3.29□□□□□ -1.88
NSP1YJL041W SPC29P33419 253 aa3.29□□□□□ -1.88
NSP1YJL041W MRPL24P36525 258 aaPredicted RBP3.29□□□□□ -1.88
NSP1YJL041W APL3P38065 1025 aa3.29□□□□□ -1.88
NSP1YJL041W SAF1P38352 637 aa3.29□□□□□ -1.88
NSP1YJL041W DBP8P38719 431 aa3.29□□□□□ -1.88
NSP1YJL041W ARN2P38724 620 aa3.29□□□□□ -1.88
NSP1YJL041W GEP4P38812 185 aa3.29□□□□□ -1.88
NSP1YJL041W VRG4P40107 337 aa3.29□□□□□ -1.88
NSP1YJL041W HXT14P42833 540 aa3.29□□□□□ -1.88
NSP1YJL041W YJR011CP47086 261 aaPredicted RBP3.29□□□□□ -1.88
NSP1YJL041W YJR149WP47177 404 aa3.29□□□□□ -1.88
NSP1YJL041W SNN1P48232 102 aa3.29□□□□□ -1.88
NSP1YJL041W YGR283CP53336 341 aaPredicted RBP3.29□□□□□ -1.88
NSP1YJL041W MRPL19P53875 158 aa3.29□□□□□ -1.88
NSP1YJL041W SLM2P53955 656 aa3.29□□□□□ -1.88
NSP1YJL041W MRP51Q02950 344 aa3.29□□□□□ -1.88
NSP1YJL041W YDR248CQ03786 193 aa3.29□□□□□ -1.88
NSP1YJL041W MSC3Q05812 728 aa3.29□□□□□ -1.88
NSP1YJL041W CDA2Q06703 312 aa3.29□□□□□ -1.88
NSP1YJL041W RDR1Q08904 546 aa3.29□□□□□ -1.88
NSP1YJL041W YPL257WQ08974 193 aa3.29□□□□□ -1.88
NSP1YJL041W SRO7Q12038 1033 aa3.29□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 50.6 ms