RNA–Protein interactions for RNA: YJL001W

PRE3, Transcript of Beta 1 subunit of the 20S proteasome, yeastyeast

Gene PRE3, Length 648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE3YJL001W UBC11P52492 156 aa5.58□□□□□ -1.52
PRE3YJL001W TAF6P53040 516 aa5.58□□□□□ -1.52
PRE3YJL001W IDP3P53982 420 aaKnown RBP5.58□□□□□ -1.52
PRE3YJL001W NUP116Q02630 1113 aa5.58□□□□□ -1.52
PRE3YJL001W SVL3Q03088 825 aaKnown RBP5.58□□□□□ -1.52
PRE3YJL001W ECM11Q04110 302 aa5.58□□□□□ -1.52
PRE3YJL001W API2Q04413 109 aa5.58□□□□□ -1.52
PRE3YJL001W TRI1Q05024 226 aa5.58□□□□□ -1.52
PRE3YJL001W FAR10Q06001 478 aa5.58□□□□□ -1.52
PRE3YJL001W RGC1Q06108 1083 aaKnown RBP5.58□□□□□ -1.52
PRE3YJL001W GMC2Q06201 188 aa5.58□□□□□ -1.52
PRE3YJL001W SFG1Q12507 346 aa5.58□□□□□ -1.52
PRE3YJL001W URA3P03962 267 aa5.57□□□□□ -1.52
PRE3YJL001W ADE5,7P07244 802 aaKnown RBP5.57□□□□□ -1.52
PRE3YJL001W YHR214C-DP0CX93 97 aa5.57□□□□□ -1.52
PRE3YJL001W PBN1P25580 416 aa5.57□□□□□ -1.52
PRE3YJL001W CTS1P29029 562 aa5.57□□□□□ -1.52
PRE3YJL001W CAF4P36130 643 aa5.57□□□□□ -1.52
PRE3YJL001W SHM2P37291 469 aaKnown RBP5.57□□□□□ -1.52
PRE3YJL001W YLF2P38746 405 aa5.57□□□□□ -1.52
PRE3YJL001W SEN34P39707 275 aa5.57□□□□□ -1.52
PRE3YJL001W PFK26P40433 827 aaKnown RBP5.57□□□□□ -1.52
PRE3YJL001W ARC1P46672 376 aaKnown RBP5.57□□□□□ -1.52
PRE3YJL001W YJL163CP46996 555 aa5.57□□□□□ -1.52
PRE3YJL001W NOP19P53317 196 aaPredicted RBP5.57□□□□□ -1.52
PRE3YJL001W NCE101Q02820 53 aa5.57□□□□□ -1.52
PRE3YJL001W SDC1Q03323 175 aa5.57□□□□□ -1.52
PRE3YJL001W VPS60Q03390 229 aa5.57□□□□□ -1.52
PRE3YJL001W ERB1Q04660 807 aaKnown RBP5.57□□□□□ -1.52
PRE3YJL001W RSA1Q08932 381 aa5.57□□□□□ -1.52
PRE3YJL001W BSC1Q12140 328 aa5.57□□□□□ -1.52
PRE3YJL001W Q0297Q9ZZV8 51 aa5.57□□□□□ -1.52
PRE3YJL001W GPH1P06738 902 aaKnown RBP5.56□□□□□ -1.52
PRE3YJL001W CBP6P07253 162 aaPredicted RBP5.56□□□□□ -1.52
PRE3YJL001W CTA1P15202 515 aa5.56□□□□□ -1.52
PRE3YJL001W YAP1P19880 650 aaKnown RBP5.56□□□□□ -1.52
PRE3YJL001W RPO26P20435 155 aa5.56□□□□□ -1.52
PRE3YJL001W PRP28P23394 588 aa5.56□□□□□ -1.52
PRE3YJL001W ILV6P25605 309 aaKnown RBP5.56□□□□□ -1.52
PRE3YJL001W SEC17P32602 292 aa5.56□□□□□ -1.52
PRE3YJL001W YEF1P32622 495 aa5.56□□□□□ -1.52
PRE3YJL001W LOS1P33418 1100 aaPredicted RBP5.56□□□□□ -1.52
PRE3YJL001W SCO2P38072 301 aa5.56□□□□□ -1.52
PRE3YJL001W ANS1P38832 159 aa5.56□□□□□ -1.52
PRE3YJL001W YHR177WP38867 453 aa5.56□□□□□ -1.52
PRE3YJL001W SEC31P38968 1273 aaKnown RBP5.56□□□□□ -1.52
PRE3YJL001W YMR144WP40214 342 aaKnown RBP5.56□□□□□ -1.52
PRE3YJL001W RIC1P40395 1056 aa5.56□□□□□ -1.52
PRE3YJL001W REE1P40893 198 aa5.56□□□□□ -1.52
PRE3YJL001W GTO1P48239 356 aa5.56□□□□□ -1.52
PRE3YJL001W YDL183CP48569 320 aa5.56□□□□□ -1.52
PRE3YJL001W RPS12P48589 143 aaKnown RBP5.56□□□□□ -1.52
PRE3YJL001W RNT1Q02555 471 aa5.56□□□□□ -1.52
PRE3YJL001W RPM2Q02773 1202 aa5.56□□□□□ -1.52
PRE3YJL001W COS7Q07788 383 aa5.56□□□□□ -1.52
PRE3YJL001W SLF1Q12034 447 aaKnown RBP5.56□□□□□ -1.52
PRE3YJL001W RPN5Q12250 445 aaKnown RBP5.56□□□□□ -1.52
PRE3YJL001W SPE4Q12455 300 aa5.56□□□□□ -1.52
PRE3YJL001W FOL3Q12676 427 aaPredicted RBP5.56□□□□□ -1.52
PRE3YJL001W NCP1P16603 691 aaKnown RBP5.55□□□□□ -1.52
PRE3YJL001W KGD1P20967 1014 aaKnown RBP5.55□□□□□ -1.52
PRE3YJL001W DBR1P24309 405 aaKnown RBP5.55□□□□□ -1.52
PRE3YJL001W RAD51P25454 400 aa5.55□□□□□ -1.52
PRE3YJL001W APD1P38281 316 aa5.55□□□□□ -1.52
PRE3YJL001W YHL037CP38733 133 aa5.55□□□□□ -1.52
PRE3YJL001W FAA2P39518 744 aa5.55□□□□□ -1.52
PRE3YJL001W GAT2P40209 560 aa5.55□□□□□ -1.52
PRE3YJL001W YGR066CP53242 292 aa5.55□□□□□ -1.52
PRE3YJL001W GOR1P53839 350 aa5.55□□□□□ -1.52
PRE3YJL001W YDL211CQ12121 372 aa5.55□□□□□ -1.52
PRE3YJL001W CAR2P07991 424 aaKnown RBP5.54□□□□□ -1.52
PRE3YJL001W PDA1P16387 420 aaKnown RBP5.54□□□□□ -1.52
PRE3YJL001W RPA135P22138 1203 aaKnown RBP5.54□□□□□ -1.52
PRE3YJL001W LIN1P38852 340 aaPredicted RBP5.54□□□□□ -1.52
PRE3YJL001W YER010CP40011 234 aa5.54□□□□□ -1.52
PRE3YJL001W ALG5P40350 334 aa5.54□□□□□ -1.52
PRE3YJL001W JEM1P40358 645 aa5.54□□□□□ -1.52
PRE3YJL001W LYS12P40495 371 aaKnown RBP5.54□□□□□ -1.52
PRE3YJL001W SWP1Q02795 286 aa5.54□□□□□ -1.52
PRE3YJL001W TVP15Q03860 143 aa5.54□□□□□ -1.52
PRE3YJL001W FMP40Q08968 688 aaPredicted RBP5.54□□□□□ -1.52
PRE3YJL001W ATG34Q12292 412 aa5.54□□□□□ -1.52
PRE3YJL001W NOP58Q12499 511 aaKnown RBP5.54□□□□□ -1.52
PRE3YJL001W URA2P07259 2214 aaKnown RBP5.54□□□□□ -1.52
PRE3YJL001W HEM4P06174 275 aa5.53□□□□□ -1.52
PRE3YJL001W SIR3P06701 978 aa5.53□□□□□ -1.52
PRE3YJL001W SEC12P11655 471 aa5.53□□□□□ -1.52
PRE3YJL001W AIM17P23180 465 aaKnown RBP5.53□□□□□ -1.52
PRE3YJL001W YOR062CP36025 268 aa5.53□□□□□ -1.52
PRE3YJL001W NSG1P38837 291 aa5.53□□□□□ -1.52
PRE3YJL001W MAL12P53341 584 aa5.53□□□□□ -1.52
PRE3YJL001W RHO5P53879 331 aaKnown RBP5.53□□□□□ -1.52
PRE3YJL001W ACS1Q01574 713 aa5.53□□□□□ -1.52
PRE3YJL001W INP1Q03694 420 aa5.53□□□□□ -1.52
PRE3YJL001W YDR249CQ03787 373 aa5.53□□□□□ -1.52
PRE3YJL001W BUR2Q05949 395 aa5.53□□□□□ -1.52
PRE3YJL001W YLR040CQ07988 224 aa5.53□□□□□ -1.52
PRE3YJL001W JLP1Q12358 412 aa5.53□□□□□ -1.52
PRE3YJL001W RAS2P01120 322 aaKnown RBP5.52□□□□□ -1.53
PRE3YJL001W MET2P08465 486 aa5.52□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 35.8 ms