RNA–Protein interactions for RNA: YHR154W

RTT107, Transcript of Protein implicated in Mms22-dependent DNA repair during S phase, yeastyeast

Gene RTT107, Length 3,213 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTT107YHR154W RPL27BP0C2H7 136 aaKnown RBP1.89□□□□□ -2.11
RTT107YHR154W RPL43AP0CX25 92 aaKnown RBP1.89□□□□□ -2.11
RTT107YHR154W RPL43BP0CX26 92 aa1.89□□□□□ -2.11
RTT107YHR154W RPL24BP24000 155 aaKnown RBP1.89□□□□□ -2.11
RTT107YHR154W VMA5P31412 392 aaKnown RBP1.89□□□□□ -2.11
RTT107YHR154W PRP21P32524 280 aaPredicted RBP1.89□□□□□ -2.11
RTT107YHR154W TOD6P34219 525 aa1.89□□□□□ -2.11
RTT107YHR154W MTR2P34232 184 aaKnown RBP1.89□□□□□ -2.11
RTT107YHR154W MED6P38782 295 aa1.89□□□□□ -2.11
RTT107YHR154W BIG1P38813 335 aa1.89□□□□□ -2.11
RTT107YHR154W RTT107P38850 1070 aa1.89□□□□□ -2.11
RTT107YHR154W BAT1P38891 393 aaKnown RBP1.89□□□□□ -2.11
RTT107YHR154W SYG1P40528 902 aa1.89□□□□□ -2.11
RTT107YHR154W VPS25P47142 202 aa1.89□□□□□ -2.11
RTT107YHR154W MNT4P53745 580 aa1.89□□□□□ -2.11
RTT107YHR154W RNT1Q02555 471 aa1.89□□□□□ -2.11
RTT107YHR154W YPL014WQ02606 381 aa1.89□□□□□ -2.11
RTT107YHR154W MMT1Q03218 510 aa1.89□□□□□ -2.11
RTT107YHR154W PRM15Q03262 622 aa1.89□□□□□ -2.11
RTT107YHR154W IVY1Q04934 453 aa1.89□□□□□ -2.11
RTT107YHR154W GLO2Q05584 274 aa1.89□□□□□ -2.11
RTT107YHR154W GMC2Q06201 188 aa1.89□□□□□ -2.11
RTT107YHR154W SSK1Q07084 712 aa1.89□□□□□ -2.11
RTT107YHR154W YDL144CQ07589 356 aa1.89□□□□□ -2.11
RTT107YHR154W PAM18Q07914 168 aa1.89□□□□□ -2.11
RTT107YHR154W LDS2Q08218 356 aa1.89□□□□□ -2.11
RTT107YHR154W ENB1Q08299 606 aa1.89□□□□□ -2.11
RTT107YHR154W TMS1Q12116 473 aa1.89□□□□□ -2.11
RTT107YHR154W LSP1Q12230 341 aaKnown RBP1.89□□□□□ -2.11
RTT107YHR154W TDH3P00359 332 aaKnown RBP RIP-Chip data1.89□□□□□ -2.11not detected
RTT107YHR154W SIR3P06701 978 aa1.89□□□□□ -2.11
RTT107YHR154W REV1P12689 985 aa1.89□□□□□ -2.11
RTT107YHR154W SPO11P23179 398 aa1.89□□□□□ -2.11
RTT107YHR154W DAL2P25335 343 aa1.89□□□□□ -2.11
RTT107YHR154W ERG9P29704 444 aa1.89□□□□□ -2.11
RTT107YHR154W ITR1P30605 584 aa1.89□□□□□ -2.11
RTT107YHR154W MRX3P38172 270 aa1.89□□□□□ -2.11
RTT107YHR154W IML3P38265 245 aa1.89□□□□□ -2.11
RTT107YHR154W MTC6P38849 526 aa1.89□□□□□ -2.11
RTT107YHR154W YEL020CP39994 560 aa1.89□□□□□ -2.11
RTT107YHR154W OTU1P43558 301 aa1.89□□□□□ -2.11
RTT107YHR154W SAD1P43589 448 aa1.89□□□□□ -2.11
RTT107YHR154W YJR011CP47086 261 aaPredicted RBP1.89□□□□□ -2.11
RTT107YHR154W ASN1P49089 572 aaKnown RBP1.89□□□□□ -2.11
RTT107YHR154W RMR1P53060 241 aa1.89□□□□□ -2.11
RTT107YHR154W RSM10Q03201 203 aa1.89□□□□□ -2.11
RTT107YHR154W VPS74Q06385 345 aa1.89□□□□□ -2.11
RTT107YHR154W MCH4Q08268 501 aa1.89□□□□□ -2.11
RTT107YHR154W ARF1P11076 181 aaKnown RBP1.89□□□□□ -2.11
RTT107YHR154W BAR1P12630 587 aa1.89□□□□□ -2.11
RTT107YHR154W MAK31P23059 88 aa1.89□□□□□ -2.11
RTT107YHR154W THI80P35202 319 aa1.89□□□□□ -2.11
RTT107YHR154W YCR041WP37265 110 aa1.89□□□□□ -2.11
RTT107YHR154W MIC12P38341 106 aa1.89□□□□□ -2.11
RTT107YHR154W LAG1P38703 411 aa1.89□□□□□ -2.11
RTT107YHR154W RFC4P40339 323 aaKnown RBP1.89□□□□□ -2.11
RTT107YHR154W YIL060WP40519 144 aa1.89□□□□□ -2.11
RTT107YHR154W LOC1P43586 204 aaPredicted RBP1.89□□□□□ -2.11
RTT107YHR154W PMT5P52867 743 aa1.89□□□□□ -2.11
RTT107YHR154W CPR8P53728 308 aa1.89□□□□□ -2.11
RTT107YHR154W ERG5P54781 538 aa1.89□□□□□ -2.11
RTT107YHR154W SPR6Q01684 191 aa1.89□□□□□ -2.11
RTT107YHR154W LGE1Q02796 332 aaKnown RBP1.89□□□□□ -2.11
RTT107YHR154W YPL080CQ02826 108 aa1.89□□□□□ -2.11
RTT107YHR154W BET5Q03630 159 aa1.89□□□□□ -2.11
RTT107YHR154W ADH6Q04894 360 aaKnown RBP1.89□□□□□ -2.11
RTT107YHR154W RUP1Q12242 671 aa1.89□□□□□ -2.11
RTT107YHR154W LAS17Q12446 633 aa1.89□□□□□ -2.11
RTT107YHR154W PDR18P53756 1333 aa1.88□□□□□ -2.11
RTT107YHR154W TDH2P00358 332 aaKnown RBP1.88□□□□□ -2.11
RTT107YHR154W RHO1P06780 209 aaKnown RBP1.88□□□□□ -2.11
RTT107YHR154W YAR066WP0CX18 203 aa1.88□□□□□ -2.11
RTT107YHR154W YHR214WP0CX19 203 aa1.88□□□□□ -2.11
RTT107YHR154W TSA1P34760 196 aaKnown RBP1.88□□□□□ -2.11
RTT107YHR154W YPT53P36019 220 aa1.88□□□□□ -2.11
RTT107YHR154W SRX1P36077 127 aa1.88□□□□□ -2.11
RTT107YHR154W VMA22P38784 181 aa1.88□□□□□ -2.11
RTT107YHR154W BTT1P40314 149 aaPredicted RBP1.88□□□□□ -2.11
RTT107YHR154W SCD6P45978 349 aaKnown RBP RIP-Chip data1.88□□□□□ -2.11 RIP-Chip
RTT107YHR154W ORC5P50874 479 aa1.88□□□□□ -2.11
RTT107YHR154W SEH1P53011 349 aaKnown RBP1.88□□□□□ -2.11
RTT107YHR154W GPI1P53306 609 aa1.88□□□□□ -2.11
RTT107YHR154W ZRG17P53735 605 aa1.88□□□□□ -2.11
RTT107YHR154W NOP13P53883 403 aaKnown RBP RIP-Chip data1.88□□□□□ -2.11not detected
RTT107YHR154W HER2Q03557 464 aa1.88□□□□□ -2.11
RTT107YHR154W YMR209CQ03648 457 aa1.88□□□□□ -2.11
RTT107YHR154W OST6Q03723 332 aa1.88□□□□□ -2.11
RTT107YHR154W RVB1Q03940 463 aaKnown RBP1.88□□□□□ -2.11
RTT107YHR154W PUS9Q12069 462 aa1.88□□□□□ -2.11
RTT107YHR154W SIA1Q12212 622 aa1.88□□□□□ -2.11
RTT107YHR154W Q0010Q9ZZX9 128 aa1.88□□□□□ -2.11
RTT107YHR154W AMD1P15274 810 aaKnown RBP1.88□□□□□ -2.11
RTT107YHR154W MET16P18408 261 aaPredicted RBP1.88□□□□□ -2.11
RTT107YHR154W STE18P18852 110 aa1.88□□□□□ -2.11
RTT107YHR154W YPK2P18961 677 aa1.88□□□□□ -2.11
RTT107YHR154W ZRC1P20107 442 aa1.88□□□□□ -2.11
RTT107YHR154W DAL82P21705 255 aa1.88□□□□□ -2.11
RTT107YHR154W APA2P22108 325 aa1.88□□□□□ -2.11
RTT107YHR154W ITR2P30606 609 aa1.88□□□□□ -2.11
RTT107YHR154W ZRT1P32804 376 aa1.88□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 41.2 ms