RNA–Protein interactions for RNA: YHR111W

UBA4, Transcript of E1-like protein that activates Urm1p before urmylation, yeastyeast

Gene UBA4, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBA4YHR111W HBS1P32769 611 aaKnown RBP9.15□□□□□ -0.94
UBA4YHR111W HCS1P34243 683 aa9.15□□□□□ -0.94
UBA4YHR111W YHL012WP38709 493 aa9.15□□□□□ -0.94
UBA4YHR111W YEL068CP39977 110 aa9.15□□□□□ -0.94
UBA4YHR111W GCN20P43535 752 aaKnown RBP9.15□□□□□ -0.94
UBA4YHR111W CAK1P43568 368 aaPredicted RBP9.15□□□□□ -0.94
UBA4YHR111W OGG1P53397 376 aaPredicted RBP9.15□□□□□ -0.94
UBA4YHR111W YPL039WQ03080 316 aa9.15□□□□□ -0.94
UBA4YHR111W PLB2Q03674 706 aa9.15□□□□□ -0.94
UBA4YHR111W HER1Q12276 1246 aa9.15□□□□□ -0.94
UBA4YHR111W YOL159C-AQ3E769 90 aa9.15□□□□□ -0.94
UBA4YHR111W CDC39P25655 2108 aaKnown RBP9.15□□□□□ -0.95
UBA4YHR111W MDH2P22133 377 aa9.14□□□□□ -0.95
UBA4YHR111W MAK32P23060 363 aa9.14□□□□□ -0.95
UBA4YHR111W MDL1P33310 695 aa9.14□□□□□ -0.95
UBA4YHR111W MGE1P38523 228 aa9.14□□□□□ -0.95
UBA4YHR111W YKR011CQ02209 353 aa9.14□□□□□ -0.95
UBA4YHR111W SYO1Q07395 620 aa9.14□□□□□ -0.95
UBA4YHR111W SKI7Q08491 747 aaPredicted RBP9.14□□□□□ -0.95
UBA4YHR111W CDC4P07834 779 aa9.13□□□□□ -0.95
UBA4YHR111W AIM17P23180 465 aaKnown RBP9.13□□□□□ -0.95
UBA4YHR111W HSP30P25619 332 aa9.13□□□□□ -0.95
UBA4YHR111W TIM12P32830 109 aa9.13□□□□□ -0.95
UBA4YHR111W HIS7P33734 552 aaKnown RBP9.13□□□□□ -0.95
UBA4YHR111W ECM15P35195 104 aa9.13□□□□□ -0.95
UBA4YHR111W SPC34P36131 295 aa9.13□□□□□ -0.95
UBA4YHR111W PEX18P38855 283 aa9.13□□□□□ -0.95
UBA4YHR111W COG3P40094 801 aa9.13□□□□□ -0.95
UBA4YHR111W NIT2P47016 307 aa9.13□□□□□ -0.95
UBA4YHR111W RMR1P53060 241 aa9.13□□□□□ -0.95
UBA4YHR111W YNR040WP53736 256 aa9.13□□□□□ -0.95
UBA4YHR111W BTS1Q12051 335 aa9.13□□□□□ -0.95
UBA4YHR111W SIR3P06701 978 aa9.12□□□□□ -0.95
UBA4YHR111W MCM1P11746 286 aa9.12□□□□□ -0.95
UBA4YHR111W UTR1P21373 530 aa9.12□□□□□ -0.95
UBA4YHR111W YCR100CP25606 316 aa9.12□□□□□ -0.95
UBA4YHR111W SNC1P31109 117 aa9.12□□□□□ -0.95
UBA4YHR111W ASF2P32448 525 aaPredicted RBP9.12□□□□□ -0.95
UBA4YHR111W ARC19P33204 171 aaKnown RBP9.12□□□□□ -0.95
UBA4YHR111W SRO77P38163 1010 aa9.12□□□□□ -0.95
UBA4YHR111W YMR262WP38430 313 aa9.12□□□□□ -0.95
UBA4YHR111W SKN7P38889 622 aa9.12□□□□□ -0.95
UBA4YHR111W RBG2P53295 368 aaKnown RBP9.12□□□□□ -0.95
UBA4YHR111W SOK2P53438 785 aaPredicted RBP9.12□□□□□ -0.95
UBA4YHR111W RSA1Q08932 381 aa9.12□□□□□ -0.95
UBA4YHR111W YPK2P18961 677 aa9.11□□□□□ -0.95
UBA4YHR111W RHB1P25378 209 aa9.11□□□□□ -0.95
UBA4YHR111W ATG15P25641 520 aa9.11□□□□□ -0.95
UBA4YHR111W PUP2P32379 260 aa9.11□□□□□ -0.95
UBA4YHR111W SLC1P33333 303 aa9.11□□□□□ -0.95
UBA4YHR111W ALP1P38971 573 aa9.11□□□□□ -0.95
UBA4YHR111W TOK1P40310 691 aa9.11□□□□□ -0.95
UBA4YHR111W YIL166CP40445 542 aa9.11□□□□□ -0.95
UBA4YHR111W BAT2P47176 376 aaKnown RBP9.11□□□□□ -0.95
UBA4YHR111W LYS5P50113 272 aa9.11□□□□□ -0.95
UBA4YHR111W YGR126WP53274 230 aa9.11□□□□□ -0.95
UBA4YHR111W YGR168CP53293 376 aa9.11□□□□□ -0.95
UBA4YHR111W CRR1Q05790 422 aa9.11□□□□□ -0.95
UBA4YHR111W UTP21Q06078 939 aaPredicted RBP9.11□□□□□ -0.95
UBA4YHR111W NDL1Q06568 189 aa9.11□□□□□ -0.95
UBA4YHR111W IRC19Q07843 230 aa9.11□□□□□ -0.95
UBA4YHR111W NTG2Q08214 380 aa9.11□□□□□ -0.95
UBA4YHR111W GRE1Q08969 168 aa9.11□□□□□ -0.95
UBA4YHR111W RCN2Q12044 265 aa9.11□□□□□ -0.95
UBA4YHR111W RLM1Q12224 676 aa9.11□□□□□ -0.95
UBA4YHR111W HMG1P12683 1054 aa9.1□□□□□ -0.95
UBA4YHR111W SBA1P28707 216 aaKnown RBP9.1□□□□□ -0.95
UBA4YHR111W PTH1P38876 190 aaKnown RBP9.1□□□□□ -0.95
UBA4YHR111W RFC4P40339 323 aaKnown RBP9.1□□□□□ -0.95
UBA4YHR111W YGL235WP53071 178 aa9.1□□□□□ -0.95
UBA4YHR111W SEC13Q04491 297 aaKnown RBP9.1□□□□□ -0.95
UBA4YHR111W EMG1Q06287 252 aaKnown RBP9.1□□□□□ -0.95
UBA4YHR111W YPR127WQ06494 345 aa9.1□□□□□ -0.95
UBA4YHR111W COQ10Q08058 207 aa9.1□□□□□ -0.95
UBA4YHR111W YPL191CQ08930 360 aa9.1□□□□□ -0.95
UBA4YHR111W YPR015CQ12531 247 aa9.1□□□□□ -0.95
UBA4YHR111W YAL064W-BO13512 126 aa9.09□□□□□ -0.95
UBA4YHR111W CDC3P32457 520 aaKnown RBP9.09□□□□□ -0.95
UBA4YHR111W TRS65P32893 560 aa9.09□□□□□ -0.95
UBA4YHR111W GPX1P36014 167 aa9.09□□□□□ -0.95
UBA4YHR111W JEN1P36035 616 aa9.09□□□□□ -0.95
UBA4YHR111W VHR1P40522 640 aa9.09□□□□□ -0.95
UBA4YHR111W MSY1P48527 492 aa9.09□□□□□ -0.95
UBA4YHR111W YGR016WP53209 190 aa9.09□□□□□ -0.95
UBA4YHR111W SNF12P53628 566 aa9.09□□□□□ -0.95
UBA4YHR111W YNR062CP53748 327 aa9.09□□□□□ -0.95
UBA4YHR111W HFD1Q04458 532 aa9.09□□□□□ -0.95
UBA4YHR111W NFI1Q12216 726 aa9.09□□□□□ -0.95
UBA4YHR111W APC2Q12440 853 aa9.09□□□□□ -0.95
UBA4YHR111W BLM10P43583 2143 aa9.09□□□□□ -0.95
UBA4YHR111W CDC36P06100 191 aaPredicted RBP9.08□□□□□ -0.96
UBA4YHR111W CAR2P07991 424 aaKnown RBP9.08□□□□□ -0.96
UBA4YHR111W YOL162WP0CF19 215 aa9.08□□□□□ -0.96
UBA4YHR111W NUP1P20676 1076 aa9.08□□□□□ -0.96
UBA4YHR111W APE2P32454 952 aaKnown RBP9.08□□□□□ -0.96
UBA4YHR111W AGP3P43548 558 aa9.08□□□□□ -0.96
UBA4YHR111W MRK1P50873 501 aa9.08□□□□□ -0.96
UBA4YHR111W MPP6P53725 186 aaPredicted RBP9.08□□□□□ -0.96
UBA4YHR111W SCS7Q03529 384 aa9.08□□□□□ -0.96
UBA4YHR111W HMO1Q03973 246 aaKnown RBP9.08□□□□□ -0.96
Retrieved 100 of 5,963 RNA–protein pairs in 20.2 ms