RNA–Protein interactions for RNA: YFR027W

ECO1, Transcript of Acetyltransferase, yeast

Gene ECO1, Length 846 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ECO1	YFR027W	ATX2	Q12067	313 aa		3.21	□□□□□ -1.9
ECO1	YFR027W	SPC3	Q12133	184 aa		3.21	□□□□□ -1.9
ECO1	YFR027W	PKH2	Q12236	1081 aa	Known RBP	3.21	□□□□□ -1.9
ECO1	YFR027W	EFG1	Q3E705	233 aa	Known RBP	3.21	□□□□□ -1.9
ECO1	YFR027W	GAL80	P04387	435 aa		3.2	□□□□□ -1.9
ECO1	YFR027W	RAD7	P06779	565 aa		3.2	□□□□□ -1.9
ECO1	YFR027W	SPS4	P09937	338 aa		3.2	□□□□□ -1.9
ECO1	YFR027W	RPL31A	P0C2H8	113 aa	Known RBP	3.2	□□□□□ -1.9
ECO1	YFR027W	RPL31B	P0C2H9	113 aa	Known RBP	3.2	□□□□□ -1.9
ECO1	YFR027W	YPK1	P12688	680 aa	Known RBP	3.2	□□□□□ -1.9
ECO1	YFR027W	MTF1	P14908	341 aa	Known RBP	3.2	□□□□□ -1.9
ECO1	YFR027W	MET8	P15807	274 aa		3.2	□□□□□ -1.9
ECO1	YFR027W	DAL81	P21657	970 aa		3.2	□□□□□ -1.9
ECO1	YFR027W	RPI1	P23250	407 aa	Known RBP	3.2	□□□□□ -1.9
ECO1	YFR027W	PPH22	P23595	377 aa		3.2	□□□□□ -1.9
ECO1	YFR027W	MNE1	P24720	663 aa		3.2	□□□□□ -1.9
ECO1	YFR027W	IFM1	P25038	676 aa		3.2	□□□□□ -1.9
ECO1	YFR027W	CPR4	P25334	318 aa		3.2	□□□□□ -1.9
ECO1	YFR027W	DEG1	P31115	442 aa	Known RBP	3.2	□□□□□ -1.9
ECO1	YFR027W	MRPL9	P31334	269 aa		3.2	□□□□□ -1.9
ECO1	YFR027W	DBF4	P32325	704 aa		3.2	□□□□□ -1.9
ECO1	YFR027W	DPH2	P32461	534 aa		3.2	□□□□□ -1.9
ECO1	YFR027W	UTR4	P32626	227 aa		3.2	□□□□□ -1.9
ECO1	YFR027W	FRE1	P32791	686 aa		3.2	□□□□□ -1.9
ECO1	YFR027W	BEM3	P32873	1128 aa		3.2	□□□□□ -1.9
ECO1	YFR027W	PDC2	P32896	925 aa		3.2	□□□□□ -1.9
ECO1	YFR027W	SUR1	P33300	382 aa		3.2	□□□□□ -1.9
ECO1	YFR027W	TCM62	P38228	572 aa	Known RBP	3.2	□□□□□ -1.9
ECO1	YFR027W	ECM8	P38246	354 aa		3.2	□□□□□ -1.9
ECO1	YFR027W	ARN2	P38724	620 aa		3.2	□□□□□ -1.9
ECO1	YFR027W	IPT1	P38954	527 aa		3.2	□□□□□ -1.9
ECO1	YFR027W	SOP4	P39543	234 aa	Predicted RBP	3.2	□□□□□ -1.9
ECO1	YFR027W	YMR144W	P40214	342 aa	Known RBP	3.2	□□□□□ -1.9
ECO1	YFR027W	PGD1	P40356	397 aa		3.2	□□□□□ -1.9
ECO1	YFR027W	TMA108	P40462	946 aa		3.2	□□□□□ -1.9
ECO1	YFR027W	YIL024C	P40543	189 aa		3.2	□□□□□ -1.9
ECO1	YFR027W	GAT1	P43574	510 aa		3.2	□□□□□ -1.9
ECO1	YFR027W	LOC1	P43586	204 aa	Predicted RBP	3.2	□□□□□ -1.9
ECO1	YFR027W	JHD2	P47156	728 aa	Predicted RBP	3.2	□□□□□ -1.9
ECO1	YFR027W	LYS20	P48570	428 aa	Known RBP	3.2	□□□□□ -1.9
ECO1	YFR027W	MRH4	P53166	561 aa		3.2	□□□□□ -1.9
ECO1	YFR027W	YGR017W	P53210	297 aa		3.2	□□□□□ -1.9
ECO1	YFR027W	SLX9	P53251	210 aa	Predicted RBP	3.2	□□□□□ -1.9
ECO1	YFR027W	BUD32	P53323	261 aa		3.2	□□□□□ -1.9
ECO1	YFR027W	ARE2	P53629	642 aa	Known RBP	3.2	□□□□□ -1.9
ECO1	YFR027W	BIO4	P53630	237 aa		3.2	□□□□□ -1.9
ECO1	YFR027W	KTR6	P54070	446 aa		3.2	□□□□□ -1.9
ECO1	YFR027W	STP1	Q00947	519 aa		3.2	□□□□□ -1.9
ECO1	YFR027W	NUP116	Q02630	1113 aa		3.2	□□□□□ -1.9
ECO1	YFR027W	YPL113C	Q02961	396 aa		3.2	□□□□□ -1.9
ECO1	YFR027W	TRS31	Q03337	283 aa		3.2	□□□□□ -1.9
ECO1	YFR027W	YDR109C	Q04585	715 aa		3.2	□□□□□ -1.9
ECO1	YFR027W	PAL1	Q05518	499 aa	Known RBP	3.2	□□□□□ -1.9
ECO1	YFR027W	CDC123	Q05791	360 aa		3.2	□□□□□ -1.9
ECO1	YFR027W	DCR2	Q05924	578 aa		3.2	□□□□□ -1.9
ECO1	YFR027W	TFC6	Q06339	672 aa		3.2	□□□□□ -1.9
ECO1	YFR027W	YPR127W	Q06494	345 aa		3.2	□□□□□ -1.9
ECO1	YFR027W	YLR046C	Q12253	270 aa		3.2	□□□□□ -1.9
ECO1	YFR027W	YOP1	Q12402	180 aa		3.2	□□□□□ -1.9
ECO1	YFR027W	HSH49	Q99181	213 aa	Predicted RBP	3.2	□□□□□ -1.9
ECO1	YFR027W	RIB3	Q99258	208 aa		3.2	□□□□□ -1.9
ECO1	YFR027W	ISN1	Q99312	450 aa		3.2	□□□□□ -1.9
ECO1	YFR027W	SEC7	P11075	2009 aa	Known RBP	3.19	□□□□□ -1.9
ECO1	YFR027W	SSA3	P09435	649 aa	Known RBP	3.19	□□□□□ -1.9
ECO1	YFR027W	TCP1	P12612	559 aa	Known RBP	3.19	□□□□□ -1.9
ECO1	YFR027W	IDP1	P21954	428 aa	Known RBP	3.19	□□□□□ -1.9
ECO1	YFR027W	YCR061W	P25639	631 aa		3.19	□□□□□ -1.9
ECO1	YFR027W	URA7	P28274	579 aa	Known RBP	3.19	□□□□□ -1.9
ECO1	YFR027W	IDH1	P28834	360 aa	Known RBP RIP-Chip data	3.19	□□□□□ -1.9	not detected
ECO1	YFR027W	FAA1	P30624	700 aa	Known RBP	3.19	□□□□□ -1.9
ECO1	YFR027W	GPI10	P30777	616 aa		3.19	□□□□□ -1.9
ECO1	YFR027W	PRO3	P32263	286 aa	Known RBP	3.19	□□□□□ -1.9
ECO1	YFR027W	TCA17	P32613	152 aa		3.19	□□□□□ -1.9
ECO1	YFR027W	RPT3	P33298	428 aa	Known RBP	3.19	□□□□□ -1.9
ECO1	YFR027W	ECT1	P33412	323 aa		3.19	□□□□□ -1.9
ECO1	YFR027W	HMT1	P38074	348 aa		3.19	□□□□□ -1.9
ECO1	YFR027W	IST2	P38250	946 aa		3.19	□□□□□ -1.9
ECO1	YFR027W	FTH1	P38310	465 aa		3.19	□□□□□ -1.9
ECO1	YFR027W	LAG1	P38703	411 aa		3.19	□□□□□ -1.9
ECO1	YFR027W	UBA4	P38820	440 aa		3.19	□□□□□ -1.9
ECO1	YFR027W	SLZ1	P40167	298 aa		3.19	□□□□□ -1.9
ECO1	YFR027W	RFC2	P40348	353 aa		3.19	□□□□□ -1.9
ECO1	YFR027W	ICE2	P40499	491 aa		3.19	□□□□□ -1.9
ECO1	YFR027W	FAR3	P46671	204 aa		3.19	□□□□□ -1.9
ECO1	YFR027W	DLD2	P46681	530 aa	Known RBP	3.19	□□□□□ -1.9
ECO1	YFR027W	ASG7	P46993	209 aa		3.19	□□□□□ -1.9
ECO1	YFR027W	LOH1	P47055	219 aa		3.19	□□□□□ -1.9
ECO1	YFR027W	SNN1	P48232	102 aa		3.19	□□□□□ -1.9
ECO1	YFR027W	RPS12	P48589	143 aa	Known RBP	3.19	□□□□□ -1.9
ECO1	YFR027W	YGL204C	P53089	101 aa		3.19	□□□□□ -1.9
ECO1	YFR027W	GPI1	P53306	609 aa		3.19	□□□□□ -1.9
ECO1	YFR027W	CBK1	P53894	756 aa		3.19	□□□□□ -1.9
ECO1	YFR027W	YNL095C	P53932	642 aa		3.19	□□□□□ -1.9
ECO1	YFR027W	SAM50	P53969	484 aa		3.19	□□□□□ -1.9
ECO1	YFR027W	RHO3	Q00245	231 aa	Known RBP	3.19	□□□□□ -1.9
ECO1	YFR027W	YPL071C	Q02864	156 aa		3.19	□□□□□ -1.9
ECO1	YFR027W	MSC1	Q03104	513 aa		3.19	□□□□□ -1.9
ECO1	YFR027W	PRP42	Q03776	544 aa	Known RBP	3.19	□□□□□ -1.9
ECO1	YFR027W	CAC2	Q04199	468 aa		3.19	□□□□□ -1.9
ECO1	YFR027W	YLR455W	Q06188	304 aa		3.19	□□□□□ -1.9

Retrieved 100 of 5,963 RNA–protein pairs in 23.3 ms