RNA–Protein interactions for RNA: YFL005W

SEC4, Transcript of Rab family GTPase, yeastyeast

Gene SEC4, Length 648 nt, Biotype protein coding, Subcellular localisation Cellular bud, Endoplasmic reticulum, Nucleus, Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC4YFL005W NAS6P50086 228 aa2.72□□□□□ -1.97
SEC4YFL005W ADD37Q03233 198 aa2.72□□□□□ -1.97
SEC4YFL005W TRM82Q03774 444 aa2.72□□□□□ -1.97
SEC4YFL005W TSA2Q04120 196 aa2.72□□□□□ -1.97
SEC4YFL005W STE23Q06010 1027 aa2.72□□□□□ -1.97
SEC4YFL005W APC2Q12440 853 aa2.72□□□□□ -1.97
SEC4YFL005W CBP2P03874 630 aaPredicted RBP2.71□□□□□ -1.98
SEC4YFL005W COX4P04037 155 aa2.71□□□□□ -1.98
SEC4YFL005W UNG1P12887 359 aa2.71□□□□□ -1.98
SEC4YFL005W PCL1P24867 279 aa2.71□□□□□ -1.98
SEC4YFL005W VMA5P31412 392 aaKnown RBP2.71□□□□□ -1.98
SEC4YFL005W IES6P32617 166 aa2.71□□□□□ -1.98
SEC4YFL005W PRS1P32895 427 aaKnown RBP2.71□□□□□ -1.98
SEC4YFL005W MYO3P36006 1272 aa2.71□□□□□ -1.98
SEC4YFL005W COS9P36034 407 aa2.71□□□□□ -1.98
SEC4YFL005W SOL2P37262 315 aa2.71□□□□□ -1.98
SEC4YFL005W RCK2P38623 610 aa2.71□□□□□ -1.98
SEC4YFL005W PES4P39684 611 aa2.71□□□□□ -1.98
SEC4YFL005W HEM14P40012 539 aa2.71□□□□□ -1.98
SEC4YFL005W ALD5P40047 520 aaKnown RBP2.71□□□□□ -1.98
SEC4YFL005W YNL320WP42840 284 aa2.71□□□□□ -1.98
SEC4YFL005W LSG1P53145 640 aaKnown RBP2.71□□□□□ -1.98
SEC4YFL005W VHT1P53241 593 aa2.71□□□□□ -1.98
SEC4YFL005W SLT2Q00772 484 aa2.71□□□□□ -1.98
SEC4YFL005W ENT5Q03769 411 aaKnown RBP2.71□□□□□ -1.98
SEC4YFL005W YLR177WQ06251 628 aa2.71□□□□□ -1.98
SEC4YFL005W DNL4Q08387 944 aaPredicted RBP2.71□□□□□ -1.98
SEC4YFL005W ALE1Q08548 619 aa2.71□□□□□ -1.98
SEC4YFL005W SLM3Q12093 417 aa2.71□□□□□ -1.98
SEC4YFL005W FRE8Q12209 686 aa2.71□□□□□ -1.98
SEC4YFL005W VPS63O13549 108 aa2.7□□□□□ -1.98
SEC4YFL005W RPL18AP0CX49 186 aaKnown RBP2.7□□□□□ -1.98
SEC4YFL005W RPL18BP0CX50 186 aaKnown RBP2.7□□□□□ -1.98
SEC4YFL005W CMK2P22517 447 aa2.7□□□□□ -1.98
SEC4YFL005W PMT2P31382 759 aa2.7□□□□□ -1.98
SEC4YFL005W UTH1P36135 365 aa2.7□□□□□ -1.98
SEC4YFL005W BMT2P38278 337 aa2.7□□□□□ -1.98
SEC4YFL005W END3P39013 349 aa2.7□□□□□ -1.98
SEC4YFL005W AIM20P40451 204 aa2.7□□□□□ -1.98
SEC4YFL005W SEH1P53011 349 aaKnown RBP2.7□□□□□ -1.98
SEC4YFL005W TAF6P53040 516 aa2.7□□□□□ -1.98
SEC4YFL005W SUR7P54003 302 aa2.7□□□□□ -1.98
SEC4YFL005W RVB1Q03940 463 aaKnown RBP2.7□□□□□ -1.98
SEC4YFL005W MDY2Q12285 212 aa2.7□□□□□ -1.98
SEC4YFL005W FOL3Q12676 427 aaPredicted RBP2.7□□□□□ -1.98
SEC4YFL005W GCD2P12754 651 aaPredicted RBP2.69□□□□□ -1.98
SEC4YFL005W RBK1P25332 333 aa2.69□□□□□ -1.98
SEC4YFL005W ACB1P31787 87 aa2.69□□□□□ -1.98
SEC4YFL005W YPS1P32329 569 aa2.69□□□□□ -1.98
SEC4YFL005W TOA1P32773 286 aa2.69□□□□□ -1.98
SEC4YFL005W PCH2P38126 564 aa2.69□□□□□ -1.98
SEC4YFL005W WSC4P38739 605 aa2.69□□□□□ -1.98
SEC4YFL005W MOB2P43563 287 aa2.69□□□□□ -1.98
SEC4YFL005W PXR1P53335 271 aaPredicted RBP2.69□□□□□ -1.98
SEC4YFL005W MRPS16Q02608 121 aa2.69□□□□□ -1.98
SEC4YFL005W ABZ2Q03266 374 aa2.69□□□□□ -1.98
SEC4YFL005W CAB5Q03941 241 aa2.69□□□□□ -1.98
SEC4YFL005W YLR297WQ05899 129 aa2.69□□□□□ -1.98
SEC4YFL005W BUR2Q05949 395 aa2.69□□□□□ -1.98
SEC4YFL005W LDB17Q12342 491 aa2.69□□□□□ -1.98
SEC4YFL005W RPN6Q12377 434 aa2.69□□□□□ -1.98
SEC4YFL005W MSS116P15424 664 aaKnown RBP2.68□□□□□ -1.98
SEC4YFL005W YBR241CP38142 488 aa2.68□□□□□ -1.98
SEC4YFL005W SHE1P38200 338 aa2.68□□□□□ -1.98
SEC4YFL005W PEX22P39718 180 aa2.68□□□□□ -1.98
SEC4YFL005W UTP25P40498 721 aaKnown RBP2.68□□□□□ -1.98
SEC4YFL005W YFR018CP43599 363 aa2.68□□□□□ -1.98
SEC4YFL005W YJR054WP47114 497 aa2.68□□□□□ -1.98
SEC4YFL005W YPS5P53057 165 aa2.68□□□□□ -1.98
SEC4YFL005W CDH1P53197 566 aa2.68□□□□□ -1.98
SEC4YFL005W YGR015CP53208 328 aa2.68□□□□□ -1.98
SEC4YFL005W RNH201P53942 307 aa2.68□□□□□ -1.98
SEC4YFL005W KTR6P54070 446 aa2.68□□□□□ -1.98
SEC4YFL005W DDC1Q08949 612 aa2.68□□□□□ -1.98
SEC4YFL005W RPL21BQ12672 160 aaKnown RBP2.68□□□□□ -1.98
SEC4YFL005W PSK1P31374 1356 aa2.67□□□□□ -1.98
SEC4YFL005W CBP6P07253 162 aaPredicted RBP2.67□□□□□ -1.98
SEC4YFL005W ITR2P30606 609 aa2.67□□□□□ -1.98
SEC4YFL005W SWC5P38326 303 aa2.67□□□□□ -1.98
SEC4YFL005W RRF1P38771 230 aa2.67□□□□□ -1.98
SEC4YFL005W MNN9P39107 395 aaKnown RBP2.67□□□□□ -1.98
SEC4YFL005W PGU1P47180 361 aa2.67□□□□□ -1.98
SEC4YFL005W YGR168CP53293 376 aa2.67□□□□□ -1.98
SEC4YFL005W MKC7P53379 596 aa2.67□□□□□ -1.98
SEC4YFL005W HCH1P53834 153 aa2.67□□□□□ -1.98
SEC4YFL005W TPS1Q00764 495 aaKnown RBP2.67□□□□□ -1.98
SEC4YFL005W YDR115WQ04598 105 aa2.67□□□□□ -1.98
SEC4YFL005W CUR1Q06469 252 aa2.67□□□□□ -1.98
SEC4YFL005W TAF10Q12030 206 aa2.67□□□□□ -1.98
SEC4YFL005W SOD1P00445 154 aaKnown RBP2.66□□□□□ -1.98
SEC4YFL005W RPS14AP06367 137 aaKnown RBP2.66□□□□□ -1.98
SEC4YFL005W ASP3-2P0CX77 362 aa2.66□□□□□ -1.98
SEC4YFL005W ASP3-3P0CX78 362 aa2.66□□□□□ -1.98
SEC4YFL005W ASP3-4P0CX79 362 aa2.66□□□□□ -1.98
SEC4YFL005W ASP3-1P0CZ17 362 aa2.66□□□□□ -1.98
SEC4YFL005W URA10P30402 227 aa2.66□□□□□ -1.98
SEC4YFL005W ECT1P33412 323 aa2.66□□□□□ -1.98
SEC4YFL005W MRPL27P36526 146 aaPredicted RBP2.66□□□□□ -1.98
SEC4YFL005W MRP21P38175 177 aa2.66□□□□□ -1.98
SEC4YFL005W SHE3P38272 425 aaKnown RBP2.66□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 21.8 ms