RNA–Protein interactions for RNA: YDR171W

HSP42, Transcript of Small heat shock protein (sHSP) with chaperone activity, yeastyeast

Gene HSP42, Length 1,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HSP42YDR171W ECM31P38122 312 aa3.93□□□□□ -1.78
HSP42YDR171W YBL028CP38202 106 aa3.93□□□□□ -1.78
HSP42YDR171W MBA1P38300 278 aa3.93□□□□□ -1.78
HSP42YDR171W ARP1P38696 384 aa3.93□□□□□ -1.78
HSP42YDR171W AIM18P38884 321 aa3.93□□□□□ -1.78
HSP42YDR171W MLH1P38920 769 aa3.93□□□□□ -1.78
HSP42YDR171W ELO1P39540 310 aa3.93□□□□□ -1.78
HSP42YDR171W AFG3P39925 761 aa3.93□□□□□ -1.78
HSP42YDR171W YKE4P40544 346 aa3.93□□□□□ -1.78
HSP42YDR171W GUF1P46943 645 aa3.93□□□□□ -1.78
HSP42YDR171W IRC18P47056 224 aa3.93□□□□□ -1.78
HSP42YDR171W KEL2P50090 882 aa3.93□□□□□ -1.78
HSP42YDR171W PKP2P53170 491 aa3.93□□□□□ -1.78
HSP42YDR171W CUL3P53202 744 aa3.93□□□□□ -1.78
HSP42YDR171W GTR2P53290 341 aa3.93□□□□□ -1.78
HSP42YDR171W NOP13P53883 403 aaKnown RBP RIP-Chip data3.93□□□□□ -1.78not detected
HSP42YDR171W FYV6P53913 173 aa3.93□□□□□ -1.78
HSP42YDR171W ALG11P53954 548 aaKnown RBP3.93□□□□□ -1.78
HSP42YDR171W PRP38Q00723 242 aaPredicted RBP3.93□□□□□ -1.78
HSP42YDR171W CTL1Q03220 320 aaKnown RBP3.93□□□□□ -1.78
HSP42YDR171W YML037CQ03703 340 aa3.93□□□□□ -1.78
HSP42YDR171W EKI1Q03764 534 aa3.93□□□□□ -1.78
HSP42YDR171W EMI2Q04409 500 aaKnown RBP3.93□□□□□ -1.78
HSP42YDR171W RNH1Q04740 348 aa3.93□□□□□ -1.78
HSP42YDR171W YPR172WQ06608 200 aa3.93□□□□□ -1.78
HSP42YDR171W IES4Q08561 116 aa3.93□□□□□ -1.78
HSP42YDR171W YGK3Q12222 375 aaPredicted RBP3.93□□□□□ -1.78
HSP42YDR171W RBD2Q12270 262 aa3.93□□□□□ -1.78
HSP42YDR171W PST2Q12335 198 aaKnown RBP3.93□□□□□ -1.78
HSP42YDR171W MHF2Q3E829 80 aa3.93□□□□□ -1.78
HSP42YDR171W ECM29P38737 1868 aa3.92□□□□□ -1.78
HSP42YDR171W SUC2P00724 532 aa3.92□□□□□ -1.78
HSP42YDR171W ARG3P05150 338 aa3.92□□□□□ -1.78
HSP42YDR171W YFL068WP0CX99 160 aa3.92□□□□□ -1.78
HSP42YDR171W YLL066W-AP0CY00 160 aa3.92□□□□□ -1.78
HSP42YDR171W YLL067W-AP0CY01 160 aa3.92□□□□□ -1.78
HSP42YDR171W DAP2P18962 818 aa3.92□□□□□ -1.78
HSP42YDR171W SYN8P31377 255 aa3.92□□□□□ -1.78
HSP42YDR171W NDI1P32340 513 aa3.92□□□□□ -1.78
HSP42YDR171W HYM1P32464 399 aa3.92□□□□□ -1.78
HSP42YDR171W RIB1P38066 345 aa3.92□□□□□ -1.78
HSP42YDR171W YBR056WP38081 501 aa3.92□□□□□ -1.78
HSP42YDR171W AGP2P38090 596 aa3.92□□□□□ -1.78
HSP42YDR171W PHO88P38264 188 aaPredicted RBP3.92□□□□□ -1.78
HSP42YDR171W GRE3P38715 327 aaKnown RBP RIP-Chip data3.92□□□□□ -1.78not detected
HSP42YDR171W YHR045WP38775 560 aa3.92□□□□□ -1.78
HSP42YDR171W YER034WP40022 185 aaKnown RBP3.92□□□□□ -1.78
HSP42YDR171W PCL6P40038 420 aa3.92□□□□□ -1.78
HSP42YDR171W COA1P40452 197 aa3.92□□□□□ -1.78
HSP42YDR171W RPS10BP46784 105 aaKnown RBP3.92□□□□□ -1.78
HSP42YDR171W UPF3P48412 387 aaKnown RBP3.92□□□□□ -1.78
HSP42YDR171W GPI8P49018 411 aa3.92□□□□□ -1.78
HSP42YDR171W NAS6P50086 228 aa3.92□□□□□ -1.78
HSP42YDR171W BIO3P50277 480 aa3.92□□□□□ -1.78
HSP42YDR171W UBC12P52491 188 aa3.92□□□□□ -1.78
HSP42YDR171W TPN1P53099 579 aa3.92□□□□□ -1.78
HSP42YDR171W MRH4P53166 561 aa3.92□□□□□ -1.78
HSP42YDR171W YGR168CP53293 376 aa3.92□□□□□ -1.78
HSP42YDR171W YNL181WP53878 407 aa3.92□□□□□ -1.78
HSP42YDR171W MRPS16Q02608 121 aa3.92□□□□□ -1.78
HSP42YDR171W ERO1Q03103 563 aa3.92□□□□□ -1.78
HSP42YDR171W DPB4Q04603 196 aaKnown RBP3.92□□□□□ -1.78
HSP42YDR171W ASR1Q06834 288 aa3.92□□□□□ -1.78
HSP42YDR171W GRC3Q07845 632 aa3.92□□□□□ -1.78
HSP42YDR171W TEN1Q07921 160 aa3.92□□□□□ -1.78
HSP42YDR171W RPS10AQ08745 105 aaPredicted RBP3.92□□□□□ -1.78
HSP42YDR171W YOR289WQ12012 251 aaPredicted RBP3.92□□□□□ -1.78
HSP42YDR171W YOL107WQ12239 342 aa3.92□□□□□ -1.78
HSP42YDR171W MDY2Q12285 212 aa3.92□□□□□ -1.78
HSP42YDR171W HEM2P05373 342 aa3.91□□□□□ -1.78
HSP42YDR171W MAS1P10507 462 aa3.91□□□□□ -1.78
HSP42YDR171W HSP26P15992 214 aaKnown RBP RIP-Chip data3.91□□□□□ -1.78not detected
HSP42YDR171W HPR1P17629 752 aaKnown RBP3.91□□□□□ -1.78
HSP42YDR171W AAT2P23542 418 aaKnown RBP3.91□□□□□ -1.78
HSP42YDR171W ADH7P25377 361 aa3.91□□□□□ -1.78
HSP42YDR171W MGR1P25573 417 aa3.91□□□□□ -1.78
HSP42YDR171W CIN8P27895 1000 aa3.91□□□□□ -1.78
HSP42YDR171W NTG1P31378 399 aa3.91□□□□□ -1.78
HSP42YDR171W DPH2P32461 534 aa3.91□□□□□ -1.78
HSP42YDR171W COX13P32799 129 aa3.91□□□□□ -1.78
HSP42YDR171W ZRT3P34240 503 aa3.91□□□□□ -1.78
HSP42YDR171W CBT1P36038 271 aaPredicted RBP3.91□□□□□ -1.78
HSP42YDR171W CAF4P36130 643 aa3.91□□□□□ -1.78
HSP42YDR171W MRPL3P36516 390 aa3.91□□□□□ -1.78
HSP42YDR171W MRPL17P36528 281 aa3.91□□□□□ -1.78
HSP42YDR171W MAK5P38112 773 aaPredicted RBP3.91□□□□□ -1.78
HSP42YDR171W MMS4P38257 691 aa3.91□□□□□ -1.78
HSP42YDR171W DBP8P38719 431 aa3.91□□□□□ -1.78
HSP42YDR171W MET30P39014 640 aa3.91□□□□□ -1.78
HSP42YDR171W HMF1P40037 129 aaKnown RBP3.91□□□□□ -1.78
HSP42YDR171W YER186CP40101 306 aa3.91□□□□□ -1.78
HSP42YDR171W NDE1P40215 560 aa3.91□□□□□ -1.78
HSP42YDR171W SOK1P40317 901 aa3.91□□□□□ -1.78
HSP42YDR171W UTP18P40362 594 aaPredicted RBP3.91□□□□□ -1.78
HSP42YDR171W YIL169CP40442 995 aa3.91□□□□□ -1.78
HSP42YDR171W TES1P41903 349 aaKnown RBP3.91□□□□□ -1.78
HSP42YDR171W COS1P53822 381 aa3.91□□□□□ -1.78
HSP42YDR171W YNL146WP53906 100 aa3.91□□□□□ -1.78
HSP42YDR171W NUP49Q02199 472 aa3.91□□□□□ -1.78
HSP42YDR171W MEH1Q02205 184 aa3.91□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 17 ms