RNA–Protein interactions for RNA: YDR048C

YDR048C, Transcript of Dubious open reading frame, yeast

Gene YDR048C, Length 315 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YDR048C	YDR048C	RSA4	P25382	515 aa	Known RBP	0.92	□□□□□ -2.26
YDR048C	YDR048C	PHO91	P27514	894 aa		0.92	□□□□□ -2.26
YDR048C	YDR048C	RPB9	P27999	122 aa		0.92	□□□□□ -2.26
YDR048C	YDR048C	SSE1	P32589	693 aa	Known RBP	0.92	□□□□□ -2.26
YDR048C	YDR048C	MED8	P38304	223 aa		0.92	□□□□□ -2.26
YDR048C	YDR048C	NDE1	P40215	560 aa		0.92	□□□□□ -2.26
YDR048C	YDR048C	TCB2	P48231	1178 aa		0.92	□□□□□ -2.26
YDR048C	YDR048C	VPS72	Q03388	795 aa		0.92	□□□□□ -2.26
YDR048C	YDR048C	UTP15	Q04305	513 aa	Known RBP	0.92	□□□□□ -2.26
YDR048C	YDR048C	CSI1	Q04368	295 aa		0.92	□□□□□ -2.26
YDR048C	YDR048C	YDR222W	Q04925	415 aa		0.92	□□□□□ -2.26
YDR048C	YDR048C	CDD1	Q06549	142 aa		0.92	□□□□□ -2.26
YDR048C	YDR048C	AAD15	Q08361	143 aa		0.92	□□□□□ -2.26
YDR048C	YDR048C	UAF30	Q08747	228 aa		0.92	□□□□□ -2.26
YDR048C	YDR048C	YPR063C	Q12160	140 aa		0.92	□□□□□ -2.26
YDR048C	YDR048C	DFM1	Q12743	341 aa	Known RBP	0.92	□□□□□ -2.26
YDR048C	YDR048C	KRE1	P17260	313 aa		0.91	□□□□□ -2.26
YDR048C	YDR048C	INO2	P26798	304 aa		0.91	□□□□□ -2.26
YDR048C	YDR048C	TAE1	P38340	232 aa		0.91	□□□□□ -2.26
YDR048C	YDR048C	FAD1	P38913	306 aa		0.91	□□□□□ -2.26
YDR048C	YDR048C	MOB2	P43563	287 aa		0.91	□□□□□ -2.26
YDR048C	YDR048C	SUR7	P54003	302 aa		0.91	□□□□□ -2.26
YDR048C	YDR048C	YLH47	Q06493	454 aa		0.91	□□□□□ -2.26
YDR048C	YDR048C	YDL121C	Q07541	149 aa		0.91	□□□□□ -2.26
YDR048C	YDR048C	ALE1	Q08548	619 aa		0.91	□□□□□ -2.26
YDR048C	YDR048C	YPL264C	Q08980	353 aa		0.91	□□□□□ -2.26
YDR048C	YDR048C	RPS14A	P06367	137 aa	Known RBP	0.9	□□□□□ -2.27
YDR048C	YDR048C	CTA1	P15202	515 aa		0.9	□□□□□ -2.27
YDR048C	YDR048C	RPS14B	P39516	138 aa	Known RBP	0.9	□□□□□ -2.27
YDR048C	YDR048C	MIC19	P43594	170 aa		0.9	□□□□□ -2.27
YDR048C	YDR048C	YFR045W	P43617	309 aa		0.9	□□□□□ -2.27
YDR048C	YDR048C	YPL080C	Q02826	108 aa		0.9	□□□□□ -2.27
YDR048C	YDR048C	YDR541C	Q03049	344 aa		0.9	□□□□□ -2.27
YDR048C	YDR048C	TRM82	Q03774	444 aa		0.9	□□□□□ -2.27
YDR048C	YDR048C	ERB1	Q04660	807 aa	Known RBP	0.9	□□□□□ -2.27
YDR048C	YDR048C	PEX30	Q06169	523 aa		0.9	□□□□□ -2.27
YDR048C	YDR048C	ARR1	Q06596	294 aa		0.9	□□□□□ -2.27
YDR048C	YDR048C	RPN8	Q08723	338 aa	Known RBP	0.9	□□□□□ -2.27
YDR048C	YDR048C	CDC31	P06704	161 aa	Known RBP	0.89	□□□□□ -2.27
YDR048C	YDR048C	ARO4	P32449	370 aa	Known RBP	0.89	□□□□□ -2.27
YDR048C	YDR048C	IST2	P38250	946 aa		0.89	□□□□□ -2.27
YDR048C	YDR048C	YCH1	P42937	148 aa		0.89	□□□□□ -2.27
YDR048C	YDR048C	ASG7	P46993	209 aa		0.89	□□□□□ -2.27
YDR048C	YDR048C	BAT2	P47176	376 aa	Known RBP	0.89	□□□□□ -2.27
YDR048C	YDR048C	MDM1	Q01846	1127 aa		0.89	□□□□□ -2.27
YDR048C	YDR048C	YDR114C	Q04597	100 aa		0.89	□□□□□ -2.27
YDR048C	YDR048C	DXO1	Q06349	442 aa		0.89	□□□□□ -2.27
YDR048C	YDR048C	VPS63	O13549	108 aa		0.88	□□□□□ -2.27
YDR048C	YDR048C	ZRT3	P34240	503 aa		0.88	□□□□□ -2.27
YDR048C	YDR048C	RCK1	P38622	512 aa		0.88	□□□□□ -2.27
YDR048C	YDR048C	MED6	P38782	295 aa		0.88	□□□□□ -2.27
YDR048C	YDR048C	YFR018C	P43599	363 aa		0.88	□□□□□ -2.27
YDR048C	YDR048C	SHS1	Q07657	551 aa		0.88	□□□□□ -2.27
YDR048C	YDR048C	FEX1	Q08913	375 aa		0.88	□□□□□ -2.27
YDR048C	YDR048C	FEX2	Q08991	375 aa		0.88	□□□□□ -2.27
YDR048C	YDR048C	UBA3	Q99344	299 aa		0.88	□□□□□ -2.27
YDR048C	YDR048C	ADH3	P07246	375 aa	Known RBP	0.87	□□□□□ -2.27
YDR048C	YDR048C	URA10	P30402	227 aa		0.87	□□□□□ -2.27
YDR048C	YDR048C	VAM7	P32912	316 aa		0.87	□□□□□ -2.27
YDR048C	YDR048C	YER084W	P40057	128 aa		0.87	□□□□□ -2.27
YDR048C	YDR048C	YGR111W	P53265	400 aa		0.87	□□□□□ -2.27
YDR048C	YDR048C	YNL095C	P53932	642 aa		0.87	□□□□□ -2.27
YDR048C	YDR048C	YOR283W	Q12040	230 aa	Known RBP	0.87	□□□□□ -2.27
YDR048C	YDR048C	LTV1	P34078	463 aa		0.86	□□□□□ -2.27
YDR048C	YDR048C	CTM1	P38818	585 aa		0.86	□□□□□ -2.27
YDR048C	YDR048C	YHR177W	P38867	453 aa		0.86	□□□□□ -2.27
YDR048C	YDR048C	YIL054W	P40524	105 aa		0.86	□□□□□ -2.27
YDR048C	YDR048C	CAX4	P53223	239 aa		0.86	□□□□□ -2.27
YDR048C	YDR048C	MEH1	Q02205	184 aa		0.86	□□□□□ -2.27
YDR048C	YDR048C	INP1	Q03694	420 aa		0.86	□□□□□ -2.27
YDR048C	YDR048C	YMR244W	Q04018	355 aa		0.86	□□□□□ -2.27
YDR048C	YDR048C	DET1	Q99288	334 aa	Known RBP	0.86	□□□□□ -2.27
YDR048C	YDR048C	PDE2	P06776	526 aa		0.85	□□□□□ -2.27
YDR048C	YDR048C	PDX1	P16451	410 aa		0.85	□□□□□ -2.27
YDR048C	YDR048C	PEX5	P35056	612 aa		0.85	□□□□□ -2.27
YDR048C	YDR048C	YKL071W	P36086	256 aa		0.85	□□□□□ -2.27
YDR048C	YDR048C	IPK1	Q06667	281 aa		0.85	□□□□□ -2.27
YDR048C	YDR048C	RRG1	Q12167	365 aa	Predicted RBP	0.85	□□□□□ -2.27
YDR048C	YDR048C	MDH1	P17505	334 aa	Known RBP RIP-Chip data	0.84	□□□□□ -2.27	not detected
YDR048C	YDR048C	FAR1	P21268	830 aa		0.84	□□□□□ -2.27
YDR048C	YDR048C	EFB1	P32471	206 aa	Known RBP	0.84	□□□□□ -2.27
YDR048C	YDR048C	RFT1	P38206	574 aa	Predicted RBP	0.84	□□□□□ -2.27
YDR048C	YDR048C	YHR182W	P38870	785 aa		0.84	□□□□□ -2.27
YDR048C	YDR048C	ASP1	P38986	381 aa	Predicted RBP	0.84	□□□□□ -2.27
YDR048C	YDR048C	ZIM17	P42844	174 aa		0.84	□□□□□ -2.27
YDR048C	YDR048C	MRX4	Q12467	430 aa		0.84	□□□□□ -2.27
YDR048C	YDR048C	FUR1	P18562	216 aa	Known RBP	0.83	□□□□□ -2.28
YDR048C	YDR048C	RPC53	P25441	422 aa		0.83	□□□□□ -2.28
YDR048C	YDR048C	ITR2	P30606	609 aa		0.83	□□□□□ -2.28
YDR048C	YDR048C	KAP104	P38217	918 aa	Known RBP	0.83	□□□□□ -2.28
YDR048C	YDR048C	LYS12	P40495	371 aa	Known RBP	0.83	□□□□□ -2.28
YDR048C	YDR048C	ECO1	P43605	281 aa		0.83	□□□□□ -2.28
YDR048C	YDR048C	SRB7	P47822	140 aa		0.83	□□□□□ -2.28
YDR048C	YDR048C	RET3	P53600	189 aa		0.83	□□□□□ -2.28
YDR048C	YDR048C	ACT1	P60010	375 aa	Known RBP	0.83	□□□□□ -2.28
YDR048C	YDR048C	CGI121	Q03705	181 aa	Known RBP	0.83	□□□□□ -2.28
YDR048C	YDR048C	YPR078C	Q06813	372 aa		0.83	□□□□□ -2.28
YDR048C	YDR048C	DCI1	Q08558	271 aa		0.83	□□□□□ -2.28
YDR048C	YDR048C	TAF10	Q12030	206 aa		0.83	□□□□□ -2.28
YDR048C	YDR048C	IES3	Q12345	250 aa		0.83	□□□□□ -2.28

Retrieved 100 of 5,963 RNA–protein pairs in 56.6 ms