RNA–Protein interactions for RNA: YBR082C

UBC4, Transcript of Ubiquitin-conjugating enzyme (E2), yeast

Gene UBC4, Length 447 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBC4	YBR082C	NCE101	Q02820	53 aa		4.95	□□□□□ -1.62
UBC4	YBR082C	DML1	Q03652	475 aa		4.95	□□□□□ -1.62
UBC4	YBR082C	SEC13	Q04491	297 aa	Known RBP	4.95	□□□□□ -1.62
UBC4	YBR082C	GAL83	Q04739	417 aa		4.95	□□□□□ -1.62
UBC4	YBR082C	YLR346C	Q06139	101 aa		4.95	□□□□□ -1.62
UBC4	YBR082C	MLC2	Q06580	163 aa		4.95	□□□□□ -1.62
UBC4	YBR082C	MSH5	Q12175	901 aa		4.95	□□□□□ -1.62
UBC4	YBR082C	NPC2	Q12408	173 aa		4.95	□□□□□ -1.62
UBC4	YBR082C	PRP46	Q12417	451 aa	Predicted RBP	4.95	□□□□□ -1.62
UBC4	YBR082C	PCL9	Q12477	304 aa		4.95	□□□□□ -1.62
UBC4	YBR082C	RAS1	P01119	309 aa		4.94	□□□□□ -1.62
UBC4	YBR082C	HOM3	P10869	527 aa		4.94	□□□□□ -1.62
UBC4	YBR082C	DAT1	P13483	248 aa	Known RBP	4.94	□□□□□ -1.62
UBC4	YBR082C	DPM1	P14020	267 aa	Known RBP	4.94	□□□□□ -1.62
UBC4	YBR082C	ERD1	P16151	362 aa		4.94	□□□□□ -1.62
UBC4	YBR082C	NCP1	P16603	691 aa	Known RBP	4.94	□□□□□ -1.62
UBC4	YBR082C	NAR1	P23503	491 aa	Known RBP	4.94	□□□□□ -1.62
UBC4	YBR082C	RPL24B	P24000	155 aa	Known RBP	4.94	□□□□□ -1.62
UBC4	YBR082C	STP22	P25604	385 aa		4.94	□□□□□ -1.62
UBC4	YBR082C	TIM12	P32830	109 aa		4.94	□□□□□ -1.62
UBC4	YBR082C	NPL6	P32832	435 aa		4.94	□□□□□ -1.62
UBC4	YBR082C	LST4	P34239	828 aa		4.94	□□□□□ -1.62
UBC4	YBR082C	JEN1	P36035	616 aa		4.94	□□□□□ -1.62
UBC4	YBR082C	BAP2	P38084	609 aa		4.94	□□□□□ -1.62
UBC4	YBR082C	YBR139W	P38109	508 aa		4.94	□□□□□ -1.62
UBC4	YBR082C	FMP23	P38231	175 aa		4.94	□□□□□ -1.62
UBC4	YBR082C	ALP1	P38971	573 aa		4.94	□□□□□ -1.62
UBC4	YBR082C	PAC1	P39946	494 aa	Known RBP	4.94	□□□□□ -1.62
UBC4	YBR082C	CIN1	P40987	1014 aa		4.94	□□□□□ -1.62
UBC4	YBR082C	SHR5	P41912	237 aa		4.94	□□□□□ -1.62
UBC4	YBR082C	SNO3	P43544	222 aa		4.94	□□□□□ -1.62
UBC4	YBR082C	IRC7	P43623	340 aa		4.94	□□□□□ -1.62
UBC4	YBR082C	MDV1	P47025	714 aa		4.94	□□□□□ -1.62
UBC4	YBR082C	SEH1	P53011	349 aa	Known RBP	4.94	□□□□□ -1.62
UBC4	YBR082C	YGR054W	P53235	642 aa	Known RBP	4.94	□□□□□ -1.62
UBC4	YBR082C	RBG2	P53295	368 aa	Known RBP	4.94	□□□□□ -1.62
UBC4	YBR082C	MPA43	P53583	542 aa	Predicted RBP	4.94	□□□□□ -1.62
UBC4	YBR082C	MNT4	P53745	580 aa		4.94	□□□□□ -1.62
UBC4	YBR082C	CIK1	Q01649	594 aa		4.94	□□□□□ -1.62
UBC4	YBR082C	YMR210W	Q03649	449 aa		4.94	□□□□□ -1.62
UBC4	YBR082C	OST6	Q03723	332 aa		4.94	□□□□□ -1.62
UBC4	YBR082C	ERB1	Q04660	807 aa	Known RBP	4.94	□□□□□ -1.62
UBC4	YBR082C	SNO4	Q04902	237 aa		4.94	□□□□□ -1.62
UBC4	YBR082C	SNT309	Q06091	175 aa	Predicted RBP	4.94	□□□□□ -1.62
UBC4	YBR082C	CDA2	Q06703	312 aa		4.94	□□□□□ -1.62
UBC4	YBR082C	BDS1	Q08347	646 aa		4.94	□□□□□ -1.62
UBC4	YBR082C	HSP33	Q08914	237 aa	Known RBP	4.94	□□□□□ -1.62
UBC4	YBR082C	HSP32	Q08992	237 aa		4.94	□□□□□ -1.62
UBC4	YBR082C	PIN2	Q12057	282 aa		4.94	□□□□□ -1.62
UBC4	YBR082C	DFG16	Q99234	619 aa		4.94	□□□□□ -1.62
UBC4	YBR082C	CYR1	P08678	2026 aa	Known RBP	4.94	□□□□□ -1.62
UBC4	YBR082C	FLP1	P03870	423 aa		4.93	□□□□□ -1.62
UBC4	YBR082C	TEC1	P18412	486 aa		4.93	□□□□□ -1.62
UBC4	YBR082C	PHO80	P20052	293 aa		4.93	□□□□□ -1.62
UBC4	YBR082C	CWH43	P25618	953 aa		4.93	□□□□□ -1.62
UBC4	YBR082C	SBA1	P28707	216 aa	Known RBP	4.93	□□□□□ -1.62
UBC4	YBR082C	ARO7	P32178	256 aa		4.93	□□□□□ -1.62
UBC4	YBR082C	SUR1	P33300	382 aa		4.93	□□□□□ -1.62
UBC4	YBR082C	OCA5	P38738	679 aa		4.93	□□□□□ -1.62
UBC4	YBR082C	NSG1	P38837	291 aa		4.93	□□□□□ -1.62
UBC4	YBR082C	NVJ1	P38881	321 aa		4.93	□□□□□ -1.62
UBC4	YBR082C	SKN7	P38889	622 aa		4.93	□□□□□ -1.62
UBC4	YBR082C	HRB1	P38922	454 aa	Known RBP RIP-Chip data	4.93	□□□□□ -1.62	not detected
UBC4	YBR082C	UME6	P39001	836 aa		4.93	□□□□□ -1.62
UBC4	YBR082C	YJL193W	P39542	402 aa		4.93	□□□□□ -1.62
UBC4	YBR082C	FMC1	P40491	155 aa		4.93	□□□□□ -1.62
UBC4	YBR082C	YIL067C	P40514	678 aa		4.93	□□□□□ -1.62
UBC4	YBR082C	IRC6	P43615	237 aa		4.93	□□□□□ -1.62
UBC4	YBR082C	YJR098C	P47139	656 aa		4.93	□□□□□ -1.62
UBC4	YBR082C	PMT3	P47190	753 aa		4.93	□□□□□ -1.62
UBC4	YBR082C	YGL235W	P53071	178 aa		4.93	□□□□□ -1.62
UBC4	YBR082C	VPS73	P53142	486 aa	Known RBP	4.93	□□□□□ -1.62
UBC4	YBR082C	YNR062C	P53748	327 aa		4.93	□□□□□ -1.62
UBC4	YBR082C	PGA1	P53896	198 aa		4.93	□□□□□ -1.62
UBC4	YBR082C	YAT1	P80235	687 aa		4.93	□□□□□ -1.62
UBC4	YBR082C	GRX3	Q03835	250 aa		4.93	□□□□□ -1.62
UBC4	YBR082C	SPC19	Q03954	165 aa		4.93	□□□□□ -1.62
UBC4	YBR082C	RRP17	Q04031	235 aa	Predicted RBP	4.93	□□□□□ -1.62
UBC4	YBR082C	YPR127W	Q06494	345 aa		4.93	□□□□□ -1.62
UBC4	YBR082C	YDL114W	Q07530	308 aa		4.93	□□□□□ -1.62
UBC4	YBR082C	YOL073C	Q08232	322 aa		4.93	□□□□□ -1.62
UBC4	YBR082C	SOG2	Q08817	791 aa		4.93	□□□□□ -1.62
UBC4	YBR082C	RKM1	Q08961	583 aa	Predicted RBP	4.93	□□□□□ -1.62
UBC4	YBR082C	FMP40	Q08968	688 aa	Predicted RBP	4.93	□□□□□ -1.62
UBC4	YBR082C	PAR32	Q12515	295 aa	Known RBP	4.93	□□□□□ -1.62
UBC4	YBR082C	YOS9	Q99220	542 aa		4.93	□□□□□ -1.62
UBC4	YBR082C	COX1	P00401	534 aa		4.92	□□□□□ -1.62
UBC4	YBR082C	YGL041W-A	P0C5N3	154 aa		4.92	□□□□□ -1.62
UBC4	YBR082C	ARF1	P11076	181 aa	Known RBP	4.92	□□□□□ -1.62
UBC4	YBR082C	YPK2	P18961	677 aa		4.92	□□□□□ -1.62
UBC4	YBR082C	GIT1	P25346	518 aa		4.92	□□□□□ -1.62
UBC4	YBR082C	HSP30	P25619	332 aa		4.92	□□□□□ -1.62
UBC4	YBR082C	PRE2	P30656	287 aa	Known RBP	4.92	□□□□□ -1.62
UBC4	YBR082C	EMP70	P32802	667 aa		4.92	□□□□□ -1.62
UBC4	YBR082C	SLC1	P33333	303 aa		4.92	□□□□□ -1.62
UBC4	YBR082C	WBP1	P33767	430 aa	Known RBP	4.92	□□□□□ -1.62
UBC4	YBR082C	GPX1	P36014	167 aa		4.92	□□□□□ -1.62
UBC4	YBR082C	ALG3	P38179	458 aa		4.92	□□□□□ -1.62
UBC4	YBR082C	SHE1	P38200	338 aa		4.92	□□□□□ -1.62
UBC4	YBR082C	MTC4	P38335	694 aa	Known RBP	4.92	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms