RNA–Protein interactions for RNA: ENST00000639290.1

CCDC7-213, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,542 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-213ENST00000639290 NUMBLQ9Y6R0 609 aa4.23□□□□□ -1.73
CCDC7-213ENST00000639290 FRYLO94915 3013 aa4.23□□□□□ -1.73
CCDC7-213ENST00000639290 C2orf16Q68DN1 1984 aa4.23□□□□□ -1.73
CCDC7-213ENST00000639290 OPHN1O60890 802 aa4.23□□□□□ -1.73
CCDC7-213ENST00000639290 ATP9AO75110 1047 aa4.23□□□□□ -1.73
CCDC7-213ENST00000639290 ECI2O75521 394 aa4.23□□□□□ -1.73
CCDC7-213ENST00000639290 CCDC192P0DO97 292 aa4.23□□□□□ -1.73
CCDC7-213ENST00000639290 SLURP2P0DP57 97 aa4.23□□□□□ -1.73
CCDC7-213ENST00000639290 DCTP40126 519 aa4.23□□□□□ -1.73
CCDC7-213ENST00000639290 GPC5P78333 572 aa4.23□□□□□ -1.73
CCDC7-213ENST00000639290 FOXO4P98177 505 aa4.23□□□□□ -1.73
CCDC7-213ENST00000639290 ZYXQ15942 572 aaKnown RBP4.23□□□□□ -1.73
CCDC7-213ENST00000639290 SPDYCQ5MJ68 293 aa4.23□□□□□ -1.73
CCDC7-213ENST00000639290 TMED8Q6PL24 325 aaPredicted RBP4.23□□□□□ -1.73
CCDC7-213ENST00000639290 MMP21Q8N119 569 aa4.23□□□□□ -1.73
CCDC7-213ENST00000639290 CEP76Q8TAP6 659 aa4.23□□□□□ -1.73
CCDC7-213ENST00000639290 EMID1Q96A84 441 aaPredicted RBP4.23□□□□□ -1.73
CCDC7-213ENST00000639290 TMEM176AQ96HP8 235 aa4.23□□□□□ -1.73
CCDC7-213ENST00000639290 DUSP15Q9H1R2 295 aaPredicted RBP4.23□□□□□ -1.73
CCDC7-213ENST00000639290 PANK3Q9H999 370 aa4.23□□□□□ -1.73
CCDC7-213ENST00000639290 EHMT1Q9H9B1 1298 aa4.23□□□□□ -1.73
CCDC7-213ENST00000639290 ARHGEF10LQ9HCE6 1279 aa4.23□□□□□ -1.73
CCDC7-213ENST00000639290 TMX2Q9Y320 296 aa4.23□□□□□ -1.73
CCDC7-213ENST00000639290 PCDHB9Q9Y5E1 797 aa4.23□□□□□ -1.73
CCDC7-213ENST00000639290 POLQO75417 2590 aa4.23□□□□□ -1.73
CCDC7-213ENST00000639290 HIDE1A8MVS5 230 aa4.22□□□□□ -1.73
CCDC7-213ENST00000639290 N4BP1O75113 896 aaKnown RBP4.22□□□□□ -1.73
CCDC7-213ENST00000639290 USP5P45974 858 aa4.22□□□□□ -1.73
CCDC7-213ENST00000639290 PPP4CP60510 307 aa4.22□□□□□ -1.73
CCDC7-213ENST00000639290 SLC23A3Q6PIS1 610 aa4.22□□□□□ -1.73
CCDC7-213ENST00000639290 KIAA1211Q6ZU35 1233 aa4.22□□□□□ -1.73
CCDC7-213ENST00000639290 TEX11Q8IYF3 940 aa4.22□□□□□ -1.73
CCDC7-213ENST00000639290 ACER1Q8TDN7 264 aa4.22□□□□□ -1.73
CCDC7-213ENST00000639290 SCFD2Q8WU76 684 aa4.22□□□□□ -1.73
CCDC7-213ENST00000639290 NOL10Q9BSC4 688 aaKnown RBP4.22□□□□□ -1.73
CCDC7-213ENST00000639290 WDR11Q9BZH6 1224 aa4.22□□□□□ -1.73
CCDC7-213ENST00000639290 ACACAQ13085 2346 aa4.22□□□□□ -1.73
CCDC7-213ENST00000639290 URB1O60287 2271 aaKnown RBP4.22□□□□□ -1.73
CCDC7-213ENST00000639290 SPAG17Q6Q759 2223 aa4.22□□□□□ -1.73
CCDC7-213ENST00000639290 PTPRQQ9UMZ3 2332 aa4.22□□□□□ -1.73
CCDC7-213ENST00000639290 B4DLN1 442 aa4.22□□□□□ -1.73
CCDC7-213ENST00000639290 MEFVO15553 781 aaPredicted RBP4.22□□□□□ -1.73
CCDC7-213ENST00000639290 HOXA2O43364 376 aa4.22□□□□□ -1.73
CCDC7-213ENST00000639290 PLIN1O60240 522 aa4.22□□□□□ -1.73
CCDC7-213ENST00000639290 F2P00734 622 aa4.22□□□□□ -1.73
CCDC7-213ENST00000639290 DRD2P14416 443 aa4.22□□□□□ -1.73
CCDC7-213ENST00000639290 THPOP40225 353 aa4.22□□□□□ -1.73
CCDC7-213ENST00000639290 CD97P48960 835 aa4.22□□□□□ -1.73
CCDC7-213ENST00000639290 MRPL12P52815 198 aaKnown RBP4.22□□□□□ -1.73
CCDC7-213ENST00000639290 SRSF5Q13243 272 aaKnown RBP4.22□□□□□ -1.73
CCDC7-213ENST00000639290 HIC1Q14526 733 aa4.22□□□□□ -1.73
CCDC7-213ENST00000639290 PPP2R5BQ15173 497 aa4.22□□□□□ -1.73
CCDC7-213ENST00000639290 SMAD1Q15797 465 aaKnown RBP4.22□□□□□ -1.73
CCDC7-213ENST00000639290 UAP1L1Q3KQV9 507 aa4.22□□□□□ -1.73
CCDC7-213ENST00000639290 C1QL3Q5VWW1 255 aa4.22□□□□□ -1.73
CCDC7-213ENST00000639290 TCEAL6Q6IPX3 200 aa4.22□□□□□ -1.73
CCDC7-213ENST00000639290 TMPRSS12Q86WS5 348 aa4.22□□□□□ -1.73
CCDC7-213ENST00000639290 LRRC47Q8N1G4 583 aaKnown RBP4.22□□□□□ -1.73
CCDC7-213ENST00000639290 LPIN2Q92539 896 aa4.22□□□□□ -1.73
CCDC7-213ENST00000639290 FGF11Q92914 225 aa4.22□□□□□ -1.73
CCDC7-213ENST00000639290 TCEAL3Q969E4 200 aa4.22□□□□□ -1.73
CCDC7-213ENST00000639290 CDC6Q99741 560 aa4.22□□□□□ -1.73
CCDC7-213ENST00000639290 PCGF6Q9BYE7 350 aa4.22□□□□□ -1.73
CCDC7-213ENST00000639290 TRIM4Q9C037 500 aa4.22□□□□□ -1.73
CCDC7-213ENST00000639290 LMAN1LQ9HAT1 526 aa4.22□□□□□ -1.73
CCDC7-213ENST00000639290 ADD3Q9UEY8 706 aaKnown RBP4.22□□□□□ -1.73
CCDC7-213ENST00000639290 CDH22Q9UJ99 828 aa4.22□□□□□ -1.73
CCDC7-213ENST00000639290 SPG11Q96JI7 2443 aa4.21□□□□□ -1.73
CCDC7-213ENST00000639290 LOC400499M0QZD8 3231 aa4.21□□□□□ -1.74
CCDC7-213ENST00000639290 APC2O95996 2303 aa4.21□□□□□ -1.74
CCDC7-213ENST00000639290 NOTCH2Q04721 2471 aa4.21□□□□□ -1.74
CCDC7-213ENST00000639290 CHL1O00533 1208 aa4.21□□□□□ -1.74
CCDC7-213ENST00000639290 ZNF862O60290 1169 aa4.21□□□□□ -1.74
CCDC7-213ENST00000639290 ZBED4O75132 1171 aa4.21□□□□□ -1.74
CCDC7-213ENST00000639290 ATG13O75143 517 aa4.21□□□□□ -1.74
CCDC7-213ENST00000639290 BAG3O95817 575 aa4.21□□□□□ -1.74
CCDC7-213ENST00000639290 KLRC3Q07444 240 aa4.21□□□□□ -1.74
CCDC7-213ENST00000639290 VAC14Q08AM6 782 aa4.21□□□□□ -1.74
CCDC7-213ENST00000639290 NAA30Q147X3 362 aaPredicted RBP4.21□□□□□ -1.74
CCDC7-213ENST00000639290 CERKLQ49MI3 558 aaPredicted RBP4.21□□□□□ -1.74
CCDC7-213ENST00000639290 TMC7Q7Z402 723 aa4.21□□□□□ -1.74
CCDC7-213ENST00000639290 CYP2U1Q7Z449 544 aa4.21□□□□□ -1.74
CCDC7-213ENST00000639290 ZNF280BQ86YH2 543 aa4.21□□□□□ -1.74
CCDC7-213ENST00000639290 WWC1Q8IX03 1113 aa4.21□□□□□ -1.74
CCDC7-213ENST00000639290 KAT2BQ92831 832 aa4.21□□□□□ -1.74
CCDC7-213ENST00000639290 HIC2Q96JB3 615 aa4.21□□□□□ -1.74
CCDC7-213ENST00000639290 DPH1Q9BZG8 443 aa4.21□□□□□ -1.74
CCDC7-213ENST00000639290 ACAD9Q9H845 621 aa4.21□□□□□ -1.74
CCDC7-213ENST00000639290 ZDHHC7Q9NXF8 308 aa4.21□□□□□ -1.74
CCDC7-213ENST00000639290 SPG21Q9NZD8 308 aa4.21□□□□□ -1.74
CCDC7-213ENST00000639290 IQSEC3Q9UPP2 1182 aaPredicted RBP4.21□□□□□ -1.74
CCDC7-213ENST00000639290 MAP3K2Q9Y2U5 619 aa4.21□□□□□ -1.74
CCDC7-213ENST00000639290 ATG2BQ96BY7 2078 aa4.21□□□□□ -1.74
CCDC7-213ENST00000639290 NF1P21359 2839 aa4.21□□□□□ -1.74
CCDC7-213ENST00000639290 CHRNB1P11230 501 aa4.21□□□□□ -1.74
CCDC7-213ENST00000639290 GNAT1P11488 350 aa4.21□□□□□ -1.74
CCDC7-213ENST00000639290 MYF5P13349 255 aa4.21□□□□□ -1.74
CCDC7-213ENST00000639290 CD72P21854 359 aa4.21□□□□□ -1.74
CCDC7-213ENST00000639290 PMS2CLQ68D20 193 aa4.21□□□□□ -1.74
CCDC7-213ENST00000639290 TMEM179Q6ZVK1 233 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms