RNA–Protein interactions for RNA: ENST00000625216.2

PNKP-217, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 629 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-217ENST00000625216 CSPP1Q1MSJ5 1256 aa14.15□□□□□ -0.14
PNKP-217ENST00000625216 TMEM192Q8IY95 271 aa14.15□□□□□ -0.14
PNKP-217ENST00000625216 CRIPAKQ8N1N5 446 aa14.15□□□□□ -0.14
PNKP-217ENST00000625216 LINC01465Q8N7H1 131 aa14.15□□□□□ -0.14
PNKP-217ENST00000625216 GPT2Q8TD30 523 aa14.15□□□□□ -0.14
PNKP-217ENST00000625216 GDPD5Q8WTR4 605 aa14.15□□□□□ -0.14
PNKP-217ENST00000625216 GJA10Q969M2 543 aa14.15□□□□□ -0.14
PNKP-217ENST00000625216 ZNF689Q96CS4 500 aaPredicted RBP14.15□□□□□ -0.14
PNKP-217ENST00000625216 CDHR5Q9HBB8 845 aa14.15□□□□□ -0.14
PNKP-217ENST00000625216 ERVK-5Q9HDB9 667 aa14.15□□□□□ -0.14
PNKP-217ENST00000625216 NOL7Q9UMY1 257 aaKnown RBP14.15□□□□□ -0.14
PNKP-217ENST00000625216 NOC2LQ9Y3T9 749 aaKnown RBP14.15□□□□□ -0.14
PNKP-217ENST00000625216 PCDHB6Q9Y5E3 794 aa14.15□□□□□ -0.14
PNKP-217ENST00000625216 SLC37A4O43826 429 aa14.14□□□□□ -0.15
PNKP-217ENST00000625216 MARCH6O60337 910 aa14.14□□□□□ -0.15
PNKP-217ENST00000625216 GPR32O75388 356 aa14.14□□□□□ -0.15
PNKP-217ENST00000625216 PSMC5P62195 406 aa14.14□□□□□ -0.15
PNKP-217ENST00000625216 TBC1D8BQ0IIM8 1120 aa14.14□□□□□ -0.15
PNKP-217ENST00000625216 STK38Q15208 465 aa14.14□□□□□ -0.15
PNKP-217ENST00000625216 UGCGQ16739 394 aa14.14□□□□□ -0.15
PNKP-217ENST00000625216 KIZQ2M2Z5 673 aa14.14□□□□□ -0.15
PNKP-217ENST00000625216 TTC38Q5R3I4 469 aa14.14□□□□□ -0.15
PNKP-217ENST00000625216 SLFN12Q8IYM2 578 aa14.14□□□□□ -0.15
PNKP-217ENST00000625216 LINC01599Q8WXQ3 324 aa14.14□□□□□ -0.15
PNKP-217ENST00000625216 CLP1Q92989 425 aaKnown RBP14.14□□□□□ -0.15
PNKP-217ENST00000625216 MRPL38Q96DV4 380 aaKnown RBP14.14□□□□□ -0.15
PNKP-217ENST00000625216 JPH2Q9BR39 696 aaPredicted RBP14.14□□□□□ -0.15
PNKP-217ENST00000625216 TMX1Q9H3N1 280 aa14.14□□□□□ -0.15
PNKP-217ENST00000625216 RC3H2Q9HBD1 1191 aaKnown RBP14.14□□□□□ -0.15
PNKP-217ENST00000625216 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.14□□□□□ -0.15
PNKP-217ENST00000625216 C1orf112Q9NSG2 853 aa14.14□□□□□ -0.15
PNKP-217ENST00000625216 ST3GAL5Q9UNP4 418 aa14.14□□□□□ -0.15
PNKP-217ENST00000625216 AKT3Q9Y243 479 aa14.14□□□□□ -0.15
PNKP-217ENST00000625216 ADGRA3Q8IWK6 1321 aa14.14□□□□□ -0.15
PNKP-217ENST00000625216 COL4A6Q14031 1691 aa14.14□□□□□ -0.15
PNKP-217ENST00000625216 VCANP13611 3396 aa14.13□□□□□ -0.15
PNKP-217ENST00000625216 C5orf67F2Z3F1 127 aa14.13□□□□□ -0.15
PNKP-217ENST00000625216 RBAK-RBAKDNI3L0D1 243 aa14.13□□□□□ -0.15
PNKP-217ENST00000625216 SPTLC2O15270 562 aa14.13□□□□□ -0.15
PNKP-217ENST00000625216 TRAK2O60296 914 aa14.13□□□□□ -0.15
PNKP-217ENST00000625216 VTNP04004 478 aa14.13□□□□□ -0.15
PNKP-217ENST00000625216 P4HBP07237 508 aaKnown RBP14.13□□□□□ -0.15
PNKP-217ENST00000625216 BMPR1AP36894 532 aa14.13□□□□□ -0.15
PNKP-217ENST00000625216 QARSP47897 775 aaKnown RBP14.13□□□□□ -0.15
PNKP-217ENST00000625216 TRAPPC10P48553 1259 aa14.13□□□□□ -0.15
PNKP-217ENST00000625216 SARSP49591 514 aaKnown RBP14.13□□□□□ -0.15
PNKP-217ENST00000625216 DNM2P50570 870 aa14.13□□□□□ -0.15
PNKP-217ENST00000625216 CLCN3P51790 818 aa14.13□□□□□ -0.15
PNKP-217ENST00000625216 NLRP11P59045 1033 aaKnown RBP14.13□□□□□ -0.15
PNKP-217ENST00000625216 UBE2HP62256 183 aa14.13□□□□□ -0.15
PNKP-217ENST00000625216 GPM6BQ13491 265 aa14.13□□□□□ -0.15
PNKP-217ENST00000625216 BTG3Q14201 252 aaPredicted RBP14.13□□□□□ -0.15
PNKP-217ENST00000625216 SLC39A14Q15043 492 aa14.13□□□□□ -0.15
PNKP-217ENST00000625216 TMEM266Q2M3C6 531 aa14.13□□□□□ -0.15
PNKP-217ENST00000625216 SLC24A5Q71RS6 500 aa14.13□□□□□ -0.15
PNKP-217ENST00000625216 EXOC8Q8IYI6 725 aa14.13□□□□□ -0.15
PNKP-217ENST00000625216 CMTR2Q8IYT2 770 aaKnown RBP14.13□□□□□ -0.15
PNKP-217ENST00000625216 TMEM40Q8WWA1 233 aa14.13□□□□□ -0.15
PNKP-217ENST00000625216 HLA-CQ95604 372 aa14.13□□□□□ -0.15
PNKP-217ENST00000625216 RGS18Q9NS28 235 aa14.13□□□□□ -0.15
PNKP-217ENST00000625216 VAV3Q9UKW4 847 aa14.13□□□□□ -0.15
PNKP-217ENST00000625216 LRFN2Q9ULH4 789 aa14.13□□□□□ -0.15
PNKP-217ENST00000625216 PPME1Q9Y570 386 aa14.13□□□□□ -0.15
PNKP-217ENST00000625216 MICAL3Q7RTP6 2002 aa14.13□□□□□ -0.15
PNKP-217ENST00000625216 PRRC2BQ5JSZ5 2229 aaKnown RBP14.13□□□□□ -0.15
PNKP-217ENST00000625216 PTPRSQ13332 1948 aa14.12□□□□□ -0.15
PNKP-217ENST00000625216 IGKV6-21A0A0C4DH24 114 aa14.12□□□□□ -0.15
PNKP-217ENST00000625216 DENND3A2RUS2 1198 aa14.12□□□□□ -0.15
PNKP-217ENST00000625216 STBD1O95210 358 aa14.12□□□□□ -0.15
PNKP-217ENST00000625216 EIF4BP23588 611 aaKnown RBP14.12□□□□□ -0.15
PNKP-217ENST00000625216 EPHA7Q15375 998 aa14.12□□□□□ -0.15
PNKP-217ENST00000625216 TPRNQ4KMQ1 711 aa14.12□□□□□ -0.15
PNKP-217ENST00000625216 FAM228AQ86W67 206 aa14.12□□□□□ -0.15
PNKP-217ENST00000625216 LRRC71Q8N4P6 559 aa14.12□□□□□ -0.15
PNKP-217ENST00000625216 KCNG4Q8TDN1 519 aa14.12□□□□□ -0.15
PNKP-217ENST00000625216 HAS1Q92839 578 aa14.12□□□□□ -0.15
PNKP-217ENST00000625216 OSMRQ99650 979 aa14.12□□□□□ -0.15
PNKP-217ENST00000625216 ADAM2Q99965 735 aa14.12□□□□□ -0.15
PNKP-217ENST00000625216 C11orf84Q9BUA3 381 aaPredicted RBP14.12□□□□□ -0.15
PNKP-217ENST00000625216 PLVAPQ9BX97 442 aa14.12□□□□□ -0.15
PNKP-217ENST00000625216 LMAN2LQ9H0V9 348 aa14.12□□□□□ -0.15
PNKP-217ENST00000625216 ADAMTS10Q9H324 1103 aa14.12□□□□□ -0.15
PNKP-217ENST00000625216 SEPT9Q9UHD8 586 aaPredicted RBP14.12□□□□□ -0.15
PNKP-217ENST00000625216 PCDHA7Q9UN72 937 aa14.12□□□□□ -0.15
PNKP-217ENST00000625216 PCDHB7Q9Y5E2 793 aa14.12□□□□□ -0.15
PNKP-217ENST00000625216 C9IYK1 514 aa14.11□□□□□ -0.15
PNKP-217ENST00000625216 EML1O00423 815 aa14.11□□□□□ -0.15
PNKP-217ENST00000625216 MAFO75444 373 aaPredicted RBP14.11□□□□□ -0.15
PNKP-217ENST00000625216 MARCKSP29966 332 aaPredicted RBP14.11□□□□□ -0.15
PNKP-217ENST00000625216 CTNNB1P35222 781 aa14.11□□□□□ -0.15
PNKP-217ENST00000625216 GPC3P51654 580 aa14.11□□□□□ -0.15
PNKP-217ENST00000625216 FAM189BP81408 668 aa14.11□□□□□ -0.15
PNKP-217ENST00000625216 ZNF174Q15697 407 aa14.11□□□□□ -0.15
PNKP-217ENST00000625216 KLHL40Q2TBA0 621 aa14.11□□□□□ -0.15
PNKP-217ENST00000625216 MTERF2Q49AM1 385 aa14.11□□□□□ -0.15
PNKP-217ENST00000625216 TIGD5Q53EQ6 642 aa14.11□□□□□ -0.15
PNKP-217ENST00000625216 NAALADL2Q58DX5 795 aa14.11□□□□□ -0.15
PNKP-217ENST00000625216 C4orf19Q8IY42 314 aa14.11□□□□□ -0.15
PNKP-217ENST00000625216 CEP89Q96ST8 783 aa14.11□□□□□ -0.15
PNKP-217ENST00000625216 ELAC1Q9H777 363 aaKnown RBP14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms