RNA–Protein interactions for RNA: ENST00000609853.1

USP6NL-206, Transcript of USP6 N-terminal like, humanhuman

TSL 4 BASIC

Gene USP6NL, Length 1,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-206ENST00000609853 HVCN1Q96D96 273 aa13.07□□□□□ -0.32
USP6NL-206ENST00000609853 INPP4AQ96PE3 977 aaPredicted RBP13.07□□□□□ -0.32
USP6NL-206ENST00000609853 C17orf75Q9HAS0 396 aa13.07□□□□□ -0.32
USP6NL-206ENST00000609853 GCNT4Q9P109 453 aa13.07□□□□□ -0.32
USP6NL-206ENST00000609853 ZNF214Q9UL59 606 aaPredicted RBP13.07□□□□□ -0.32
USP6NL-206ENST00000609853 DUSP10Q9Y6W6 482 aa13.07□□□□□ -0.32
USP6NL-206ENST00000609853 KIAA1217Q5T5P2 1943 aa13.06□□□□□ -0.32
USP6NL-206ENST00000609853 K7ENM7 598 aa13.06□□□□□ -0.32
USP6NL-206ENST00000609853 ENC1O14682 589 aa13.06□□□□□ -0.32
USP6NL-206ENST00000609853 N4BP1O75113 896 aaKnown RBP13.06□□□□□ -0.32
USP6NL-206ENST00000609853 CAPN15O75808 1086 aa13.06□□□□□ -0.32
USP6NL-206ENST00000609853 CCDC172P0C7W6 258 aa13.06□□□□□ -0.32
USP6NL-206ENST00000609853 FERP16591 822 aa13.06□□□□□ -0.32
USP6NL-206ENST00000609853 ABCD1P33897 745 aa13.06□□□□□ -0.32
USP6NL-206ENST00000609853 HMGCS2P54868 508 aa13.06□□□□□ -0.32
USP6NL-206ENST00000609853 JAM2P57087 298 aa13.06□□□□□ -0.32
USP6NL-206ENST00000609853 GTF2BQ00403 316 aa13.06□□□□□ -0.32
USP6NL-206ENST00000609853 DGKZQ13574 1117 aa13.06□□□□□ -0.32
USP6NL-206ENST00000609853 INTS8Q75QN2 995 aaKnown RBP13.06□□□□□ -0.32
USP6NL-206ENST00000609853 OTUD6AQ7L8S5 288 aa13.06□□□□□ -0.32
USP6NL-206ENST00000609853 IRF2BP2Q7Z5L9 587 aa13.06□□□□□ -0.32
USP6NL-206ENST00000609853 FAM133AQ8N9E0 248 aa13.06□□□□□ -0.32
USP6NL-206ENST00000609853 MOV10L1Q9BXT6 1211 aaKnown RBP13.06□□□□□ -0.32
USP6NL-206ENST00000609853 ACAD9Q9H845 621 aa13.06□□□□□ -0.32
USP6NL-206ENST00000609853 ANKZF1Q9H8Y5 726 aa13.06□□□□□ -0.32
USP6NL-206ENST00000609853 PKD2L1Q9P0L9 805 aa13.06□□□□□ -0.32
USP6NL-206ENST00000609853 SNX12Q9UMY4 172 aa13.06□□□□□ -0.32
USP6NL-206ENST00000609853 TFR2Q9UP52 801 aa13.06□□□□□ -0.32
USP6NL-206ENST00000609853 PCDHA10Q9Y5I2 948 aa13.06□□□□□ -0.32
USP6NL-206ENST00000609853 NFASCO94856 1347 aa13.06□□□□□ -0.32
USP6NL-206ENST00000609853 TESPA1A2RU30 521 aaPredicted RBP13.05□□□□□ -0.32
USP6NL-206ENST00000609853 SPDYE4A6NLX3 237 aa13.05□□□□□ -0.32
USP6NL-206ENST00000609853 P4HA2O15460 535 aa13.05□□□□□ -0.32
USP6NL-206ENST00000609853 KRT13P13646 458 aa13.05□□□□□ -0.32
USP6NL-206ENST00000609853 FMO5P49326 533 aa13.05□□□□□ -0.32
USP6NL-206ENST00000609853 MCCD1P59942 119 aaPredicted RBP13.05□□□□□ -0.32
USP6NL-206ENST00000609853 CBX1P83916 185 aa13.05□□□□□ -0.32
USP6NL-206ENST00000609853 CETN1Q12798 172 aa13.05□□□□□ -0.32
USP6NL-206ENST00000609853 NAB2Q15742 525 aa13.05□□□□□ -0.32
USP6NL-206ENST00000609853 IFI16Q16666 785 aaKnown RBP13.05□□□□□ -0.32
USP6NL-206ENST00000609853 WDR93Q6P2C0 686 aa13.05□□□□□ -0.32
USP6NL-206ENST00000609853 ZNF572Q7Z3I7 529 aaPredicted RBP13.05□□□□□ -0.32
USP6NL-206ENST00000609853 MSL3Q8N5Y2 521 aaKnown RBP13.05□□□□□ -0.32
USP6NL-206ENST00000609853 ATP6V0A1Q93050 837 aa13.05□□□□□ -0.32
USP6NL-206ENST00000609853 GGA3Q9NZ52 723 aa13.05□□□□□ -0.32
USP6NL-206ENST00000609853 RNF14Q9UBS8 474 aa13.05□□□□□ -0.32
USP6NL-206ENST00000609853 KCNG1Q9UIX4 513 aa13.05□□□□□ -0.32
USP6NL-206ENST00000609853 EXOC7Q9UPT5 735 aa13.05□□□□□ -0.32
USP6NL-206ENST00000609853 HYOU1Q9Y4L1 999 aa13.05□□□□□ -0.32
USP6NL-206ENST00000609853 AFG3L2Q9Y4W6 797 aa13.05□□□□□ -0.32
USP6NL-206ENST00000609853 FHOD1Q9Y613 1164 aa13.05□□□□□ -0.32
USP6NL-206ENST00000609853 TARSL2A2RTX5 802 aaKnown RBP13.05□□□□□ -0.32
USP6NL-206ENST00000609853 EXOC3O60645 756 aa13.05□□□□□ -0.32
USP6NL-206ENST00000609853 PNMA6AP0CW24 399 aaPredicted RBP13.05□□□□□ -0.32
USP6NL-206ENST00000609853 STAT1P42224 750 aa13.05□□□□□ -0.32
USP6NL-206ENST00000609853 SMTNP53814 917 aa13.05□□□□□ -0.32
USP6NL-206ENST00000609853 GNPTABQ3T906 1256 aa13.05□□□□□ -0.32
USP6NL-206ENST00000609853 CCDC70Q6NSX1 233 aa13.05□□□□□ -0.32
USP6NL-206ENST00000609853 CHST13Q8NET6 341 aa13.05□□□□□ -0.32
USP6NL-206ENST00000609853 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.05□□□□□ -0.32
USP6NL-206ENST00000609853 TRPM4Q8TD43 1214 aa13.05□□□□□ -0.32
USP6NL-206ENST00000609853 RUBCNQ92622 972 aa13.05□□□□□ -0.32
USP6NL-206ENST00000609853 ARID3AQ99856 593 aa13.05□□□□□ -0.32
USP6NL-206ENST00000609853 STK33Q9BYT3 514 aa13.05□□□□□ -0.32
USP6NL-206ENST00000609853 BCAS3Q9H6U6 928 aa13.05□□□□□ -0.32
USP6NL-206ENST00000609853 POLD4Q9HCU8 107 aa13.05□□□□□ -0.32
USP6NL-206ENST00000609853 SIX2Q9NPC8 291 aa13.05□□□□□ -0.32
USP6NL-206ENST00000609853 HDAC6Q9UBN7 1215 aa13.05□□□□□ -0.32
USP6NL-206ENST00000609853 INTUQ9ULD6 942 aa13.05□□□□□ -0.32
USP6NL-206ENST00000609853 RIPK3Q9Y572 518 aa13.05□□□□□ -0.32
USP6NL-206ENST00000609853 LOC285556D6RIA3 1793 aa13.04□□□□□ -0.32
USP6NL-206ENST00000609853 PMM2O15305 246 aa13.04□□□□□ -0.32
USP6NL-206ENST00000609853 ATP9AO75110 1047 aa13.04□□□□□ -0.32
USP6NL-206ENST00000609853 MOCS3O95396 460 aa13.04□□□□□ -0.32
USP6NL-206ENST00000609853 CCNE2O96020 404 aa13.04□□□□□ -0.32
USP6NL-206ENST00000609853 MYCNP04198 464 aaPredicted RBP13.04□□□□□ -0.32
USP6NL-206ENST00000609853 ACTN1P12814 892 aa13.04□□□□□ -0.32
USP6NL-206ENST00000609853 SCP2P22307 547 aa13.04□□□□□ -0.32
USP6NL-206ENST00000609853 CYP2J2P51589 502 aa13.04□□□□□ -0.32
USP6NL-206ENST00000609853 NCKAP1LP55160 1127 aa13.04□□□□□ -0.32
USP6NL-206ENST00000609853 BFSP1Q12934 665 aa13.04□□□□□ -0.32
USP6NL-206ENST00000609853 TMEM132BQ14DG7 1078 aa13.04□□□□□ -0.32
USP6NL-206ENST00000609853 HAUS6Q7Z4H7 955 aa13.04□□□□□ -0.32
USP6NL-206ENST00000609853 DNERQ8NFT8 737 aa13.04□□□□□ -0.32
USP6NL-206ENST00000609853 CAGE1Q8TC20 777 aa13.04□□□□□ -0.32
USP6NL-206ENST00000609853 KIFAP3Q92845 792 aa13.04□□□□□ -0.32
USP6NL-206ENST00000609853 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.04□□□□□ -0.32
USP6NL-206ENST00000609853 CYP39A1Q9NYL5 469 aa13.04□□□□□ -0.32
USP6NL-206ENST00000609853 ADAMTS1Q9UHI8 967 aa13.04□□□□□ -0.32
USP6NL-206ENST00000609853 CAPN6Q9Y6Q1 641 aa13.04□□□□□ -0.32
USP6NL-206ENST00000609853 POLR2AP24928 1970 aaKnown RBP13.04□□□□□ -0.32
USP6NL-206ENST00000609853 A0A087X0T9 212 aa13.03□□□□□ -0.32
USP6NL-206ENST00000609853 PSAPP07602 524 aa13.03□□□□□ -0.32
USP6NL-206ENST00000609853 FAM228BP0C875 321 aa13.03□□□□□ -0.32
USP6NL-206ENST00000609853 RTP1P59025 263 aa13.03□□□□□ -0.32
USP6NL-206ENST00000609853 FAM193AP78312 1265 aa13.03□□□□□ -0.32
USP6NL-206ENST00000609853 PTK2Q05397 1052 aa13.03□□□□□ -0.32
USP6NL-206ENST00000609853 ENPEPQ07075 957 aa13.03□□□□□ -0.32
USP6NL-206ENST00000609853 KIAA0753Q2KHM9 967 aa13.03□□□□□ -0.32
USP6NL-206ENST00000609853 XKR9Q5GH70 373 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms