RNA–Protein interactions for RNA: ENST00000606000.1

CTSA-210, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 644 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-210ENST00000606000 TTC12Q9H892 705 aaPredicted RBP13.78□□□□□ -0.2
CTSA-210ENST00000606000 CYP26B1Q9NR63 512 aa13.78□□□□□ -0.2
CTSA-210ENST00000606000 THEGQ9P2T0 379 aa13.78□□□□□ -0.2
CTSA-210ENST00000606000 MRPL42Q9Y6G3 142 aaKnown RBP13.78□□□□□ -0.2
CTSA-210ENST00000606000 A0A087WZ62 844 aa13.77□□□□□ -0.21
CTSA-210ENST00000606000 DENND3A2RUS2 1198 aa13.77□□□□□ -0.21
CTSA-210ENST00000606000 C9IYK1 514 aa13.77□□□□□ -0.21
CTSA-210ENST00000606000 GPR182O15218 404 aa13.77□□□□□ -0.21
CTSA-210ENST00000606000 ST18O60284 1047 aa13.77□□□□□ -0.21
CTSA-210ENST00000606000 MAFO75444 373 aaPredicted RBP13.77□□□□□ -0.21
CTSA-210ENST00000606000 DARSP14868 501 aaKnown RBP13.77□□□□□ -0.21
CTSA-210ENST00000606000 EIF4BP23588 611 aaKnown RBP13.77□□□□□ -0.21
CTSA-210ENST00000606000 YWHABP31946 246 aaKnown RBP13.77□□□□□ -0.21
CTSA-210ENST00000606000 SARSP49591 514 aaKnown RBP13.77□□□□□ -0.21
CTSA-210ENST00000606000 TFF2Q03403 129 aa13.77□□□□□ -0.21
CTSA-210ENST00000606000 GPM6BQ13491 265 aa13.77□□□□□ -0.21
CTSA-210ENST00000606000 ZNF174Q15697 407 aa13.77□□□□□ -0.21
CTSA-210ENST00000606000 RHPN2Q8IUC4 686 aa13.77□□□□□ -0.21
CTSA-210ENST00000606000 C4orf19Q8IY42 314 aa13.77□□□□□ -0.21
CTSA-210ENST00000606000 EIF2AK1Q9BQI3 630 aaKnown RBP13.77□□□□□ -0.21
CTSA-210ENST00000606000 FDXACB1Q9BRP7 624 aaPredicted RBP13.77□□□□□ -0.21
CTSA-210ENST00000606000 UPF2Q9HAU5 1272 aaKnown RBP13.77□□□□□ -0.21
CTSA-210ENST00000606000 PLXNA4Q9HCM2 1894 aa13.77□□□□□ -0.21
CTSA-210ENST00000606000 RGS18Q9NS28 235 aa13.77□□□□□ -0.21
CTSA-210ENST00000606000 SUCLA2Q9P2R7 463 aaPredicted RBP13.77□□□□□ -0.21
CTSA-210ENST00000606000 PCDHA12Q9UN75 941 aa13.77□□□□□ -0.21
CTSA-210ENST00000606000 H3BNC9 293 aa13.76□□□□□ -0.21
CTSA-210ENST00000606000 SLITRK3O94933 977 aa13.76□□□□□ -0.21
CTSA-210ENST00000606000 FGFR1P11362 822 aa13.76□□□□□ -0.21
CTSA-210ENST00000606000 FAM102BQ5T8I3 360 aa13.76□□□□□ -0.21
CTSA-210ENST00000606000 TPH2Q8IWU9 490 aa13.76□□□□□ -0.21
CTSA-210ENST00000606000 TMEM143Q96AN5 459 aa13.76□□□□□ -0.21
CTSA-210ENST00000606000 NLRP4Q96MN2 994 aa13.76□□□□□ -0.21
CTSA-210ENST00000606000 FOXP1Q9H334 677 aaPredicted RBP13.76□□□□□ -0.21
CTSA-210ENST00000606000 LRFN2Q9ULH4 789 aa13.76□□□□□ -0.21
CTSA-210ENST00000606000 PRUNE2Q8WUY3 3088 aa13.76□□□□□ -0.21
CTSA-210ENST00000606000 MYO9BQ13459 2157 aa13.75□□□□□ -0.21
CTSA-210ENST00000606000 STAG3L1P0CL83 205 aa13.75□□□□□ -0.21
CTSA-210ENST00000606000 POLGP54098 1239 aaPredicted RBP13.75□□□□□ -0.21
CTSA-210ENST00000606000 EMC2Q15006 297 aa13.75□□□□□ -0.21
CTSA-210ENST00000606000 XKR9Q5GH70 373 aa13.75□□□□□ -0.21
CTSA-210ENST00000606000 TTC38Q5R3I4 469 aa13.75□□□□□ -0.21
CTSA-210ENST00000606000 SLC24A5Q71RS6 500 aa13.75□□□□□ -0.21
CTSA-210ENST00000606000 NOSTRINQ8IVI9 506 aa13.75□□□□□ -0.21
CTSA-210ENST00000606000 CMTR2Q8IYT2 770 aaKnown RBP13.75□□□□□ -0.21
CTSA-210ENST00000606000 SAMD11Q96NU1 681 aa13.75□□□□□ -0.21
CTSA-210ENST00000606000 HSD17B14Q9BPX1 270 aa13.75□□□□□ -0.21
CTSA-210ENST00000606000 DHX33Q9H6R0 707 aaKnown RBP13.75□□□□□ -0.21
CTSA-210ENST00000606000 ZSWIM4Q9H7M6 989 aa13.75□□□□□ -0.21
CTSA-210ENST00000606000 XPNPEP1Q9NQW7 623 aa13.75□□□□□ -0.21
CTSA-210ENST00000606000 C1orf112Q9NSG2 853 aa13.75□□□□□ -0.21
CTSA-210ENST00000606000 RNF19AQ9NV58 838 aa13.75□□□□□ -0.21
CTSA-210ENST00000606000 PCDHB7Q9Y5E2 793 aa13.75□□□□□ -0.21
CTSA-210ENST00000606000 PRRC2BQ5JSZ5 2229 aaKnown RBP13.75□□□□□ -0.21
CTSA-210ENST00000606000 TBKBP1A7MCY6 615 aa13.74□□□□□ -0.21
CTSA-210ENST00000606000 C5orf67F2Z3F1 127 aa13.74□□□□□ -0.21
CTSA-210ENST00000606000 GRM6O15303 877 aa13.74□□□□□ -0.21
CTSA-210ENST00000606000 DKC1O60832 514 aaKnown RBP eCLIP13.74□□□□□ -0.21
CTSA-210ENST00000606000 MED24O75448 989 aa13.74□□□□□ -0.21
CTSA-210ENST00000606000 OR52Z1P0C646 297 aa13.74□□□□□ -0.21
CTSA-210ENST00000606000 GJB2P29033 226 aa13.74□□□□□ -0.21
CTSA-210ENST00000606000 BMPR1AP36894 532 aa13.74□□□□□ -0.21
CTSA-210ENST00000606000 TECP42680 631 aa13.74□□□□□ -0.21
CTSA-210ENST00000606000 TOB1P50616 345 aaPredicted RBP13.74□□□□□ -0.21
CTSA-210ENST00000606000 KCNQ1P51787 676 aa13.74□□□□□ -0.21
CTSA-210ENST00000606000 GNL2Q13823 731 aaKnown RBP13.74□□□□□ -0.21
CTSA-210ENST00000606000 ODR4Q5SWX8 454 aa13.74□□□□□ -0.21
CTSA-210ENST00000606000 PIGOQ8TEQ8 1089 aa13.74□□□□□ -0.21
CTSA-210ENST00000606000 SLC7A3Q8WY07 619 aa13.74□□□□□ -0.21
CTSA-210ENST00000606000 CLP1Q92989 425 aaKnown RBP13.74□□□□□ -0.21
CTSA-210ENST00000606000 GCOM2Q9BZD3 368 aaPredicted RBP13.74□□□□□ -0.21
CTSA-210ENST00000606000 COL4A3BPQ9Y5P4 624 aa13.74□□□□□ -0.21
CTSA-210ENST00000606000 SPATA31C1P0DKV0 1188 aa13.73□□□□□ -0.21
CTSA-210ENST00000606000 ATF7P17544 494 aaPredicted RBP13.73□□□□□ -0.21
CTSA-210ENST00000606000 RFC5P40937 340 aa13.73□□□□□ -0.21
CTSA-210ENST00000606000 DNM2P50570 870 aa13.73□□□□□ -0.21
CTSA-210ENST00000606000 FAM189BP81408 668 aa13.73□□□□□ -0.21
CTSA-210ENST00000606000 TJAP1Q5JTD0 557 aa13.73□□□□□ -0.21
CTSA-210ENST00000606000 RNF169Q8NCN4 708 aa13.73□□□□□ -0.21
CTSA-210ENST00000606000 ATXN2LQ8WWM7 1075 aaKnown RBP13.73□□□□□ -0.21
CTSA-210ENST00000606000 PRPF31Q8WWY3 499 aaKnown RBP13.73□□□□□ -0.21
CTSA-210ENST00000606000 MRPL38Q96DV4 380 aaKnown RBP13.73□□□□□ -0.21
CTSA-210ENST00000606000 ASB2Q96Q27 587 aa13.73□□□□□ -0.21
CTSA-210ENST00000606000 MINDY3Q9H8M7 445 aa13.73□□□□□ -0.21
CTSA-210ENST00000606000 IFT122Q9HBG6 1241 aa13.73□□□□□ -0.21
CTSA-210ENST00000606000 ALG13Q9NP73 1137 aaKnown RBP13.73□□□□□ -0.21
CTSA-210ENST00000606000 TMEM161AQ9NX61 479 aa13.73□□□□□ -0.21
CTSA-210ENST00000606000 LMCD1Q9NZU5 365 aa13.73□□□□□ -0.21
CTSA-210ENST00000606000 PCDHB6Q9Y5E3 794 aa13.73□□□□□ -0.21
CTSA-210ENST00000606000 TRANK1O15050 2925 aa13.72□□□□□ -0.21
CTSA-210ENST00000606000 LYPLA2O95372 231 aa13.72□□□□□ -0.21
CTSA-210ENST00000606000 SRGAP2CP0DJJ0 459 aa13.72□□□□□ -0.21
CTSA-210ENST00000606000 ZSCAN20P17040 1043 aaPredicted RBP13.72□□□□□ -0.21
CTSA-210ENST00000606000 DNAJB1P25685 340 aa13.72□□□□□ -0.21
CTSA-210ENST00000606000 U2AF2P26368 475 aaKnown RBP eCLIP13.72□□□□□ -0.21
CTSA-210ENST00000606000 RARRES1P49788 294 aa13.72□□□□□ -0.21
CTSA-210ENST00000606000 LAMTOR4Q0VGL1 99 aa13.72□□□□□ -0.21
CTSA-210ENST00000606000 LONRF3Q496Y0 759 aa13.72□□□□□ -0.21
CTSA-210ENST00000606000 TCEAL5Q5H9L2 206 aa13.72□□□□□ -0.21
CTSA-210ENST00000606000 POTEGQ6S5H5 508 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms