RNA–Protein interactions for RNA: ENST00000602655.5

PPFIA3-206, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 3,493 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-206ENST00000602655 SPAG1Q07617 926 aa16.66■□□□□ 0.26
PPFIA3-206ENST00000602655 GRM1Q13255 1194 aa16.66■□□□□ 0.26
PPFIA3-206ENST00000602655 SPZ1Q9BXG8 430 aa16.66■□□□□ 0.26
PPFIA3-206ENST00000602655 SCN9AQ15858 1988 aa16.66■□□□□ 0.26
PPFIA3-206ENST00000602655 TPP2P29144 1249 aaPredicted RBP16.65■□□□□ 0.26
PPFIA3-206ENST00000602655 STAT2P52630 851 aa16.65■□□□□ 0.26
PPFIA3-206ENST00000602655 ATP2C1P98194 919 aaPredicted RBP16.65■□□□□ 0.26
PPFIA3-206ENST00000602655 PTPROQ16827 1216 aa16.65■□□□□ 0.26
PPFIA3-206ENST00000602655 RREB1Q92766 1687 aa16.65■□□□□ 0.26
PPFIA3-206ENST00000602655 TRAPPC3O43617 180 aa16.65■□□□□ 0.26
PPFIA3-206ENST00000602655 FESP07332 822 aa16.65■□□□□ 0.26
PPFIA3-206ENST00000602655 HMGCS2P54868 508 aa16.65■□□□□ 0.26
PPFIA3-206ENST00000602655 KCNJ2P63252 427 aa16.65■□□□□ 0.26
PPFIA3-206ENST00000602655 SLC5A9Q2M3M2 681 aa16.65■□□□□ 0.26
PPFIA3-206ENST00000602655 ANKRD20A2Q5SQ80 823 aa16.65■□□□□ 0.26
PPFIA3-206ENST00000602655 GPATCH4Q5T3I0 446 aaKnown RBP16.65■□□□□ 0.26
PPFIA3-206ENST00000602655 ANKRD20A1Q5TYW2 823 aa16.65■□□□□ 0.26
PPFIA3-206ENST00000602655 ANKRD20A3Q5VUR7 823 aa16.65■□□□□ 0.26
PPFIA3-206ENST00000602655 RUFY4Q6ZNE9 571 aa16.65■□□□□ 0.26
PPFIA3-206ENST00000602655 KRT25Q7Z3Z0 450 aa16.65■□□□□ 0.26
PPFIA3-206ENST00000602655 AGPAT5Q9NUQ2 364 aa16.65■□□□□ 0.26
PPFIA3-206ENST00000602655 C2CD2Q9Y426 696 aa16.65■□□□□ 0.26
PPFIA3-206ENST00000602655 CAPN6Q9Y6Q1 641 aa16.65■□□□□ 0.26
PPFIA3-206ENST00000602655 HIP1RO75146 1068 aa16.65■□□□□ 0.26
PPFIA3-206ENST00000602655 TCP1P17987 556 aaKnown RBP16.65■□□□□ 0.26
PPFIA3-206ENST00000602655 PPP2R2AP63151 447 aa16.65■□□□□ 0.26
PPFIA3-206ENST00000602655 CFAP221Q4G0U5 840 aa16.65■□□□□ 0.26
PPFIA3-206ENST00000602655 APTXQ7Z2E3 356 aaKnown RBP16.65■□□□□ 0.26
PPFIA3-206ENST00000602655 MYLK4Q86YV6 388 aaPredicted RBP16.65■□□□□ 0.26
PPFIA3-206ENST00000602655 NELFBQ8WX92 580 aa16.65■□□□□ 0.26
PPFIA3-206ENST00000602655 TNFRSF25Q93038 417 aa16.65■□□□□ 0.26
PPFIA3-206ENST00000602655 TAF1DQ9H5J8 278 aaPredicted RBP16.65■□□□□ 0.26
PPFIA3-206ENST00000602655 GOLGA6L10A0A0M3HER8 536 aa16.64■□□□□ 0.25
PPFIA3-206ENST00000602655 SFI1A8K8P3 1242 aa16.64■□□□□ 0.25
PPFIA3-206ENST00000602655 ATP2A2P16615 1042 aaKnown RBP16.64■□□□□ 0.25
PPFIA3-206ENST00000602655 PSMD1Q99460 953 aa16.64■□□□□ 0.25
PPFIA3-206ENST00000602655 ZMYND12Q9H0C1 365 aa16.64■□□□□ 0.25
PPFIA3-206ENST00000602655 GGA2Q9UJY4 613 aa16.64■□□□□ 0.25
PPFIA3-206ENST00000602655 ANO9A1A5B4 782 aa16.64■□□□□ 0.25
PPFIA3-206ENST00000602655 A8MUI8 341 aa16.64■□□□□ 0.25
PPFIA3-206ENST00000602655 AMNQ9BXJ7 453 aa16.64■□□□□ 0.25
PPFIA3-206ENST00000602655 SPON1Q9HCB6 807 aa16.64■□□□□ 0.25
PPFIA3-206ENST00000602655 NPHP3-ACAD11A0A0J9YXS1 232 aa16.64■□□□□ 0.25
PPFIA3-206ENST00000602655 DNAJC8O75937 253 aaPredicted RBP16.64■□□□□ 0.25
PPFIA3-206ENST00000602655 PBX1P40424 430 aa16.64■□□□□ 0.25
PPFIA3-206ENST00000602655 TGFB2P61812 414 aa16.64■□□□□ 0.25
PPFIA3-206ENST00000602655 SPDYE2Q495Y8 402 aa16.64■□□□□ 0.25
PPFIA3-206ENST00000602655 PPP1R15BQ5SWA1 713 aa16.64■□□□□ 0.25
PPFIA3-206ENST00000602655 CCT6BQ92526 530 aa16.64■□□□□ 0.25
PPFIA3-206ENST00000602655 NAF1Q96HR8 494 aaKnown RBP16.64■□□□□ 0.25
PPFIA3-206ENST00000602655 LZTS2Q9BRK4 669 aa16.64■□□□□ 0.25
PPFIA3-206ENST00000602655 PAGR1Q9BTK6 254 aa16.64■□□□□ 0.25
PPFIA3-206ENST00000602655 PCDHA12Q9UN75 941 aa16.64■□□□□ 0.25
PPFIA3-206ENST00000602655 ACTN4O43707 911 aaKnown RBP16.63■□□□□ 0.25
PPFIA3-206ENST00000602655 PAK1Q13153 545 aa16.63■□□□□ 0.25
PPFIA3-206ENST00000602655 BLMHQ13867 455 aa16.63■□□□□ 0.25
PPFIA3-206ENST00000602655 NELFCDQ8IXH7 590 aa16.63■□□□□ 0.25
PPFIA3-206ENST00000602655 FAM81AQ8TBF8 368 aa16.63■□□□□ 0.25
PPFIA3-206ENST00000602655 CAVIN3Q969G5 261 aa16.63■□□□□ 0.25
PPFIA3-206ENST00000602655 SPDYE5A6NIY4 337 aa16.63■□□□□ 0.25
PPFIA3-206ENST00000602655 FCER1AP12319 257 aa16.63■□□□□ 0.25
PPFIA3-206ENST00000602655 RCAN1P53805 252 aa16.63■□□□□ 0.25
PPFIA3-206ENST00000602655 FERMT2Q96AC1 680 aa16.63■□□□□ 0.25
PPFIA3-206ENST00000602655 CHMP6Q96FZ7 201 aa16.63■□□□□ 0.25
PPFIA3-206ENST00000602655 RIOX1Q9H6W3 641 aa16.63■□□□□ 0.25
PPFIA3-206ENST00000602655 ADAMTSL1Q8N6G6 1762 aa16.62■□□□□ 0.25
PPFIA3-206ENST00000602655 hCG_2014768A0A024R1R8 64 aa16.62■□□□□ 0.25
PPFIA3-206ENST00000602655 E9PMD0 336 aa16.62■□□□□ 0.25
PPFIA3-206ENST00000602655 PPFIA2O75334 1257 aa16.62■□□□□ 0.25
PPFIA3-206ENST00000602655 TCP11X2Q5H9J9 407 aa16.62■□□□□ 0.25
PPFIA3-206ENST00000602655 SLC17A8Q8NDX2 589 aa16.62■□□□□ 0.25
PPFIA3-206ENST00000602655 TRIM47Q96LD4 638 aa16.62■□□□□ 0.25
PPFIA3-206ENST00000602655 ANO3Q9BYT9 981 aa16.62■□□□□ 0.25
PPFIA3-206ENST00000602655 KDM4CQ9H3R0 1056 aa16.62■□□□□ 0.25
PPFIA3-206ENST00000602655 KIAA1024Q9UPX6 916 aa16.62■□□□□ 0.25
PPFIA3-206ENST00000602655 ANKRD31Q8N7Z5 1873 aa16.62■□□□□ 0.25
PPFIA3-206ENST00000602655 ADM5C9JUS6 153 aa16.62■□□□□ 0.25
PPFIA3-206ENST00000602655 IGF2BP3O00425 579 aaKnown RBP eCLIP16.62■□□□□ 0.25
PPFIA3-206ENST00000602655 ALDH5A1P51649 535 aaPredicted RBP16.62■□□□□ 0.25
PPFIA3-206ENST00000602655 PDE4DQ08499 809 aa16.62■□□□□ 0.25
PPFIA3-206ENST00000602655 DDX42Q86XP3 938 aaKnown RBP eCLIP16.62■□□□□ 0.25
PPFIA3-206ENST00000602655 CALML4Q96GE6 196 aa16.62■□□□□ 0.25
PPFIA3-206ENST00000602655 TRIM31Q9BZY9 425 aa16.62■□□□□ 0.25
PPFIA3-206ENST00000602655 DLGAP2Q9P1A6 1054 aa16.62■□□□□ 0.25
PPFIA3-206ENST00000602655 CCPG1Q9ULG6 757 aa16.62■□□□□ 0.25
PPFIA3-206ENST00000602655 H0Y3Z8 333 aa16.62■□□□□ 0.25
PPFIA3-206ENST00000602655 ENTPD3O75355 529 aa16.62■□□□□ 0.25
PPFIA3-206ENST00000602655 EIF2AK2P19525 551 aaKnown RBP16.62■□□□□ 0.25
PPFIA3-206ENST00000602655 TMEM154Q6P9G4 183 aa16.62■□□□□ 0.25
PPFIA3-206ENST00000602655 CRELD2Q6UXH1 353 aaPredicted RBP16.62■□□□□ 0.25
PPFIA3-206ENST00000602655 EEPD1Q7L9B9 569 aa16.62■□□□□ 0.25
PPFIA3-206ENST00000602655 FBF1Q8TES7 1133 aa16.62■□□□□ 0.25
PPFIA3-206ENST00000602655 P2RX7Q99572 595 aaKnown RBP16.62■□□□□ 0.25
PPFIA3-206ENST00000602655 MTRQ99707 1265 aa16.62■□□□□ 0.25
PPFIA3-206ENST00000602655 ZBTB39O15060 712 aa16.61■□□□□ 0.25
PPFIA3-206ENST00000602655 SARSP49591 514 aaKnown RBP16.61■□□□□ 0.25
PPFIA3-206ENST00000602655 TMEM266Q2M3C6 531 aa16.61■□□□□ 0.25
PPFIA3-206ENST00000602655 PIGOQ8TEQ8 1089 aa16.61■□□□□ 0.25
PPFIA3-206ENST00000602655 GMLQ99445 158 aa16.61■□□□□ 0.25
PPFIA3-206ENST00000602655 POTEB3A0JP26 581 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms