RNA–Protein interactions for RNA: ENST00000596900.5

SPTBN4-210, Transcript of spectrin beta, non-erythrocytic 4, humanhuman

TSL 1 (best)

Gene SPTBN4, Length 1,857 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4-210ENST00000596900 IFT74Q96LB3 600 aa25.3■■□□□ 1.64
SPTBN4-210ENST00000596900 APBA2Q99767 749 aa25.3■■□□□ 1.64
SPTBN4-210ENST00000596900 GBP3Q9H0R5 595 aa25.3■■□□□ 1.64
SPTBN4-210ENST00000596900 MGAMO43451 1857 aa25.29■■□□□ 1.64
SPTBN4-210ENST00000596900 NRDCO43847 1150 aa25.29■■□□□ 1.64
SPTBN4-210ENST00000596900 ECM2O94769 699 aaPredicted RBP25.29■■□□□ 1.64
SPTBN4-210ENST00000596900 SFPQP23246 707 aaKnown RBP eCLIP25.29■■□□□ 1.64
SPTBN4-210ENST00000596900 NFIL3Q16649 462 aa25.29■■□□□ 1.64
SPTBN4-210ENST00000596900 MAN2A1Q16706 1144 aa25.29■■□□□ 1.64
SPTBN4-210ENST00000596900 DUSP28Q4G0W2 176 aa25.29■■□□□ 1.64
SPTBN4-210ENST00000596900 LRRC8AQ8IWT6 810 aa25.29■■□□□ 1.64
SPTBN4-210ENST00000596900 SYCP3Q8IZU3 236 aa25.29■■□□□ 1.64
SPTBN4-210ENST00000596900 SPIRE2Q8WWL2 714 aa25.29■■□□□ 1.64
SPTBN4-210ENST00000596900 USP6NLQ92738 828 aa25.29■■□□□ 1.64
SPTBN4-210ENST00000596900 HVCN1Q96D96 273 aa25.29■■□□□ 1.64
SPTBN4-210ENST00000596900 DHX33Q9H6R0 707 aaKnown RBP25.29■■□□□ 1.64
SPTBN4-210ENST00000596900 H0YCG3 227 aa25.28■■□□□ 1.64
SPTBN4-210ENST00000596900 PBX1P40424 430 aa25.28■■□□□ 1.64
SPTBN4-210ENST00000596900 MARSP56192 900 aaKnown RBP25.28■■□□□ 1.64
SPTBN4-210ENST00000596900 OLFML2BQ68BL8 750 aa25.28■■□□□ 1.64
SPTBN4-210ENST00000596900 HAUS6Q7Z4H7 955 aa25.28■■□□□ 1.64
SPTBN4-210ENST00000596900 ATP8B4Q8TF62 1192 aa25.28■■□□□ 1.64
SPTBN4-210ENST00000596900 CAPNS2Q96L46 248 aa25.28■■□□□ 1.64
SPTBN4-210ENST00000596900 ZNF830Q96NB3 372 aaPredicted RBP25.28■■□□□ 1.64
SPTBN4-210ENST00000596900 XPNPEP1Q9NQW7 623 aa25.28■■□□□ 1.64
SPTBN4-210ENST00000596900 ZMYM2Q9UBW7 1377 aa25.28■■□□□ 1.64
SPTBN4-210ENST00000596900 FCGRTP55899 365 aa25.28■■□□□ 1.64
SPTBN4-210ENST00000596900 GTF2BQ00403 316 aa25.28■■□□□ 1.64
SPTBN4-210ENST00000596900 KCNA1Q09470 495 aa25.28■■□□□ 1.64
SPTBN4-210ENST00000596900 TARBP2Q15633 366 aaKnown RBP25.28■■□□□ 1.64
SPTBN4-210ENST00000596900 FKBP15Q5T1M5 1219 aa25.28■■□□□ 1.64
SPTBN4-210ENST00000596900 ACCSQ96QU6 501 aa25.28■■□□□ 1.64
SPTBN4-210ENST00000596900 KMT5AQ9NQR1 393 aa25.28■■□□□ 1.64
SPTBN4-210ENST00000596900 ERAP1Q9NZ08 941 aa25.28■■□□□ 1.64
SPTBN4-210ENST00000596900 CGNQ9P2M7 1197 aaKnown RBP25.28■■□□□ 1.64
SPTBN4-210ENST00000596900 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP25.28■■□□□ 1.64
SPTBN4-210ENST00000596900 A0A1W2PQC6 194 aa25.27■■□□□ 1.64
SPTBN4-210ENST00000596900 CCDC169A6NNP5 214 aa25.27■■□□□ 1.64
SPTBN4-210ENST00000596900 NR3C1P04150 777 aa25.27■■□□□ 1.64
SPTBN4-210ENST00000596900 SCP2P22307 547 aa25.27■■□□□ 1.64
SPTBN4-210ENST00000596900 TMEM63BQ5T3F8 832 aa25.27■■□□□ 1.64
SPTBN4-210ENST00000596900 NTPCRQ9BSD7 190 aaKnown RBP25.27■■□□□ 1.64
SPTBN4-210ENST00000596900 EXOC7Q9UPT5 735 aa25.27■■□□□ 1.64
SPTBN4-210ENST00000596900 TGFB1I1O43294 461 aa25.26■■□□□ 1.63
SPTBN4-210ENST00000596900 GAS2O43903 313 aaKnown RBP25.26■■□□□ 1.63
SPTBN4-210ENST00000596900 TPM1P09493 284 aa25.26■■□□□ 1.63
SPTBN4-210ENST00000596900 CYP2B6P20813 491 aa25.26■■□□□ 1.63
SPTBN4-210ENST00000596900 NPTX2P47972 431 aa25.26■■□□□ 1.63
SPTBN4-210ENST00000596900 APLP1P51693 650 aa25.26■■□□□ 1.63
SPTBN4-210ENST00000596900 TRIM14Q14142 442 aa25.26■■□□□ 1.63
SPTBN4-210ENST00000596900 TRIM50Q86XT4 487 aa25.26■■□□□ 1.63
SPTBN4-210ENST00000596900 CACTINQ8WUQ7 758 aaKnown RBP25.26■■□□□ 1.63
SPTBN4-210ENST00000596900 POLR3FQ9H1D9 316 aaPredicted RBP25.26■■□□□ 1.63
SPTBN4-210ENST00000596900 KCNF1Q9H3M0 494 aa25.26■■□□□ 1.63
SPTBN4-210ENST00000596900 SLC16A4O15374 487 aa25.26■■□□□ 1.63
SPTBN4-210ENST00000596900 MARK3P27448 753 aa25.26■■□□□ 1.63
SPTBN4-210ENST00000596900 SNRPFP62306 86 aaKnown RBP25.26■■□□□ 1.63
SPTBN4-210ENST00000596900 TBX2Q13207 712 aaPredicted RBP25.26■■□□□ 1.63
SPTBN4-210ENST00000596900 PPP2R5AQ15172 486 aa25.26■■□□□ 1.63
SPTBN4-210ENST00000596900 VWA3BQ502W6 1294 aa25.26■■□□□ 1.63
SPTBN4-210ENST00000596900 GJC2Q5T442 439 aaPredicted RBP25.26■■□□□ 1.63
SPTBN4-210ENST00000596900 PPFIBP1Q86W92 1011 aa25.26■■□□□ 1.63
SPTBN4-210ENST00000596900 JPH2Q9BR39 696 aaPredicted RBP25.26■■□□□ 1.63
SPTBN4-210ENST00000596900 GJD2Q9UKL4 321 aa25.26■■□□□ 1.63
SPTBN4-210ENST00000596900 C11orf97A0A1B0GVM6 126 aaPredicted RBP25.25■■□□□ 1.63
SPTBN4-210ENST00000596900 SLC16A3O15427 465 aaKnown RBP25.25■■□□□ 1.63
SPTBN4-210ENST00000596900 HBP1O60381 514 aa25.25■■□□□ 1.63
SPTBN4-210ENST00000596900 PPFIA4O75335 1185 aa25.25■■□□□ 1.63
SPTBN4-210ENST00000596900 SMPD1P17405 629 aa25.25■■□□□ 1.63
SPTBN4-210ENST00000596900 TBC1D8BQ0IIM8 1120 aa25.25■■□□□ 1.63
SPTBN4-210ENST00000596900 CEP89Q96ST8 783 aa25.25■■□□□ 1.63
SPTBN4-210ENST00000596900 NDST4Q9H3R1 872 aa25.25■■□□□ 1.63
SPTBN4-210ENST00000596900 TRPC6Q9Y210 931 aa25.25■■□□□ 1.63
SPTBN4-210ENST00000596900 MAFO75444 373 aaPredicted RBP25.24■■□□□ 1.63
SPTBN4-210ENST00000596900 EPB41P11171 864 aaKnown RBP25.24■■□□□ 1.63
SPTBN4-210ENST00000596900 TNFAIP2Q03169 654 aa25.24■■□□□ 1.63
SPTBN4-210ENST00000596900 MYBPC2Q14324 1141 aa25.24■■□□□ 1.63
SPTBN4-210ENST00000596900 PLCB4Q15147 1175 aa25.24■■□□□ 1.63
SPTBN4-210ENST00000596900 PTPN21Q16825 1174 aa25.24■■□□□ 1.63
SPTBN4-210ENST00000596900 MIIPQ5JXC2 388 aa25.24■■□□□ 1.63
SPTBN4-210ENST00000596900 FRMD5Q7Z6J6 570 aa25.24■■□□□ 1.63
SPTBN4-210ENST00000596900 OR6J1Q8NGC5 347 aa25.24■■□□□ 1.63
SPTBN4-210ENST00000596900 AFG1LQ8WV93 481 aa25.24■■□□□ 1.63
SPTBN4-210ENST00000596900 METTL14Q9HCE5 456 aaKnown RBP25.24■■□□□ 1.63
SPTBN4-210ENST00000596900 AGPAT3Q9NRZ7 376 aa25.24■■□□□ 1.63
SPTBN4-210ENST00000596900 ZNF215Q9UL58 517 aaPredicted RBP25.24■■□□□ 1.63
SPTBN4-210ENST00000596900 FAM184BQ9ULE4 1060 aa25.24■■□□□ 1.63
SPTBN4-210ENST00000596900 AOC2O75106 756 aa25.23■■□□□ 1.63
SPTBN4-210ENST00000596900 LGALS2P05162 132 aa25.23■■□□□ 1.63
SPTBN4-210ENST00000596900 PPP2R3AQ06190 1150 aa25.23■■□□□ 1.63
SPTBN4-210ENST00000596900 KSR1Q8IVT5 923 aa25.23■■□□□ 1.63
SPTBN4-210ENST00000596900 TMEM161BQ8NDZ6 487 aa25.23■■□□□ 1.63
SPTBN4-210ENST00000596900 CLIC2O15247 247 aa25.23■■□□□ 1.63
SPTBN4-210ENST00000596900 ARMCX5Q6P1M9 558 aa25.23■■□□□ 1.63
SPTBN4-210ENST00000596900 CCDC112Q8NEF3 446 aa25.23■■□□□ 1.63
SPTBN4-210ENST00000596900 TCP11Q8WWU5 503 aa25.23■■□□□ 1.63
SPTBN4-210ENST00000596900 MKNK1Q9BUB5 465 aa25.23■■□□□ 1.63
SPTBN4-210ENST00000596900 EIF2AK3Q9NZJ5 1116 aaKnown RBP25.23■■□□□ 1.63
SPTBN4-210ENST00000596900 FLRT1Q9NZU1 646 aa25.23■■□□□ 1.63
SPTBN4-210ENST00000596900 ARMCX3Q9UH62 379 aaPredicted RBP25.23■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms