RNA–Protein interactions for RNA: ENST00000593678.5

GTF2F1-202, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 2

Gene GTF2F1, Length 1,705 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-202ENST00000593678 ACCSQ96QU6 501 aa16.41■□□□□ 0.22
GTF2F1-202ENST00000593678 PCYT2Q99447 389 aa16.41■□□□□ 0.22
GTF2F1-202ENST00000593678 KMT5AQ9NQR1 393 aa16.41■□□□□ 0.22
GTF2F1-202ENST00000593678 ERAP1Q9NZ08 941 aa16.41■□□□□ 0.22
GTF2F1-202ENST00000593678 TRPC6Q9Y210 931 aa16.41■□□□□ 0.22
GTF2F1-202ENST00000593678 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.41■□□□□ 0.224e-7■■■■□ 20.3
GTF2F1-202ENST00000593678 ATP4AP20648 1035 aa16.4■□□□□ 0.22
GTF2F1-202ENST00000593678 ARHGAP1Q07960 439 aa16.4■□□□□ 0.22
GTF2F1-202ENST00000593678 TBC1D8BQ0IIM8 1120 aa16.4■□□□□ 0.22
GTF2F1-202ENST00000593678 PPP2R5AQ15172 486 aa16.4■□□□□ 0.22
GTF2F1-202ENST00000593678 DUSP28Q4G0W2 176 aa16.4■□□□□ 0.22
GTF2F1-202ENST00000593678 HAUS6Q7Z4H7 955 aa16.4■□□□□ 0.22
GTF2F1-202ENST00000593678 ATP8B4Q8TF62 1192 aa16.4■□□□□ 0.22
GTF2F1-202ENST00000593678 EMID1Q96A84 441 aaPredicted RBP16.4■□□□□ 0.22
GTF2F1-202ENST00000593678 FIZ1Q96SL8 496 aa16.4■□□□□ 0.22
GTF2F1-202ENST00000593678 ZIC5Q96T25 663 aa16.4■□□□□ 0.22
GTF2F1-202ENST00000593678 JPH2Q9BR39 696 aaPredicted RBP16.4■□□□□ 0.22
GTF2F1-202ENST00000593678 POLR3FQ9H1D9 316 aaPredicted RBP16.4■□□□□ 0.22
GTF2F1-202ENST00000593678 ST6GALNAC4Q9H4F1 302 aa16.4■□□□□ 0.22
GTF2F1-202ENST00000593678 ZNF215Q9UL58 517 aaPredicted RBP16.4■□□□□ 0.22
GTF2F1-202ENST00000593678 RASSF10A6NK89 507 aa16.39■□□□□ 0.21
GTF2F1-202ENST00000593678 SLC16A4O15374 487 aa16.39■□□□□ 0.21
GTF2F1-202ENST00000593678 TEX33O43247 280 aa16.39■□□□□ 0.21
GTF2F1-202ENST00000593678 NR3C1P04150 777 aa16.39■□□□□ 0.21
GTF2F1-202ENST00000593678 APLP1P51693 650 aa16.39■□□□□ 0.21
GTF2F1-202ENST00000593678 NCKAP1LP55160 1127 aa16.39■□□□□ 0.21
GTF2F1-202ENST00000593678 TNFAIP2Q03169 654 aa16.39■□□□□ 0.21
GTF2F1-202ENST00000593678 KIF22Q14807 665 aa16.39■□□□□ 0.21
GTF2F1-202ENST00000593678 MAN2A1Q16706 1144 aa16.39■□□□□ 0.21
GTF2F1-202ENST00000593678 OLFML2BQ68BL8 750 aa16.39■□□□□ 0.21
GTF2F1-202ENST00000593678 LRRC8AQ8IWT6 810 aa16.39■□□□□ 0.21
GTF2F1-202ENST00000593678 SPIRE2Q8WWL2 714 aa16.39■□□□□ 0.21
GTF2F1-202ENST00000593678 HVCN1Q96D96 273 aa16.39■□□□□ 0.21
GTF2F1-202ENST00000593678 KATNBL1Q9H079 304 aa16.39■□□□□ 0.21
GTF2F1-202ENST00000593678 GAS2O43903 313 aaKnown RBP16.39■□□□□ 0.21
GTF2F1-202ENST00000593678 EPB41P11171 864 aaKnown RBP16.39■□□□□ 0.21
GTF2F1-202ENST00000593678 SCP2P22307 547 aa16.39■□□□□ 0.21
GTF2F1-202ENST00000593678 YY1P25490 414 aa16.39■□□□□ 0.21
GTF2F1-202ENST00000593678 NPTX2P47972 431 aa16.39■□□□□ 0.21
GTF2F1-202ENST00000593678 TRIM14Q14142 442 aa16.39■□□□□ 0.21
GTF2F1-202ENST00000593678 TRIM50Q86XT4 487 aa16.39■□□□□ 0.21
GTF2F1-202ENST00000593678 OR6J1Q8NGC5 347 aa16.39■□□□□ 0.21
GTF2F1-202ENST00000593678 PCMTD1Q96MG8 357 aaPredicted RBP16.39■□□□□ 0.21
GTF2F1-202ENST00000593678 DHX33Q9H6R0 707 aaKnown RBP16.39■□□□□ 0.21
GTF2F1-202ENST00000593678 CGNQ9P2M7 1197 aaKnown RBP16.39■□□□□ 0.21
GTF2F1-202ENST00000593678 FRMD4BQ9Y2L6 1034 aa16.39■□□□□ 0.21
GTF2F1-202ENST00000593678 ITIH6Q6UXX5 1313 aa16.38■□□□□ 0.21
GTF2F1-202ENST00000593678 SLC16A3O15427 465 aaKnown RBP16.38■□□□□ 0.21
GTF2F1-202ENST00000593678 HBP1O60381 514 aa16.38■□□□□ 0.21
GTF2F1-202ENST00000593678 AOC2O75106 756 aa16.38■□□□□ 0.21
GTF2F1-202ENST00000593678 PPFIA4O75335 1185 aa16.38■□□□□ 0.21
GTF2F1-202ENST00000593678 SMPD1P17405 629 aa16.38■□□□□ 0.21
GTF2F1-202ENST00000593678 HOXD13P35453 343 aa16.38■□□□□ 0.21
GTF2F1-202ENST00000593678 PSMC4P43686 418 aa16.38■□□□□ 0.21
GTF2F1-202ENST00000593678 GTF2BQ00403 316 aa16.38■□□□□ 0.21
GTF2F1-202ENST00000593678 KCNA1Q09470 495 aa16.38■□□□□ 0.21
GTF2F1-202ENST00000593678 VWA3BQ502W6 1294 aa16.38■□□□□ 0.21
GTF2F1-202ENST00000593678 GJC2Q5T442 439 aaPredicted RBP16.38■□□□□ 0.21
GTF2F1-202ENST00000593678 CEP135Q66GS9 1140 aa16.38■□□□□ 0.21
GTF2F1-202ENST00000593678 AFG1LQ8WV93 481 aa16.38■□□□□ 0.21
GTF2F1-202ENST00000593678 TCP11Q8WWU5 503 aa16.38■□□□□ 0.21
GTF2F1-202ENST00000593678 METTL14Q9HCE5 456 aaKnown RBP16.38■□□□□ 0.21
GTF2F1-202ENST00000593678 PDLIM7Q9NR12 457 aa16.38■□□□□ 0.21
GTF2F1-202ENST00000593678 FAM184BQ9ULE4 1060 aa16.38■□□□□ 0.21
GTF2F1-202ENST00000593678 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.38■□□□□ 0.21
GTF2F1-202ENST00000593678 DOCK3Q8IZD9 2030 aa16.38■□□□□ 0.21
GTF2F1-202ENST00000593678 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.37■□□□□ 0.21
GTF2F1-202ENST00000593678 A0A1W2PQC6 194 aa16.37■□□□□ 0.21
GTF2F1-202ENST00000593678 CLIC2O15247 247 aa16.37■□□□□ 0.21
GTF2F1-202ENST00000593678 PPP1R37O75864 691 aa16.37■□□□□ 0.21
GTF2F1-202ENST00000593678 LGALS2P05162 132 aa16.37■□□□□ 0.21
GTF2F1-202ENST00000593678 SNRPFP62306 86 aaKnown RBP16.37■□□□□ 0.21
GTF2F1-202ENST00000593678 PPP2R3AQ06190 1150 aa16.37■□□□□ 0.21
GTF2F1-202ENST00000593678 PLCB4Q15147 1175 aa16.37■□□□□ 0.21
GTF2F1-202ENST00000593678 NFIL3Q16649 462 aa16.37■□□□□ 0.21
GTF2F1-202ENST00000593678 DGKDQ16760 1214 aa16.37■□□□□ 0.21
GTF2F1-202ENST00000593678 PTPN21Q16825 1174 aa16.37■□□□□ 0.21
GTF2F1-202ENST00000593678 BRDTQ58F21 947 aaPredicted RBP16.37■□□□□ 0.21
GTF2F1-202ENST00000593678 TMEM63BQ5T3F8 832 aa16.37■□□□□ 0.21
GTF2F1-202ENST00000593678 FRMD5Q7Z6J6 570 aa16.37■□□□□ 0.21
GTF2F1-202ENST00000593678 KSR1Q8IVT5 923 aa16.37■□□□□ 0.21
GTF2F1-202ENST00000593678 ZC3H3Q8IXZ2 948 aaKnown RBP16.37■□□□□ 0.21
GTF2F1-202ENST00000593678 DEPTORQ8TB45 409 aa16.37■□□□□ 0.21
GTF2F1-202ENST00000593678 CACTINQ8WUQ7 758 aaKnown RBP16.37■□□□□ 0.21
GTF2F1-202ENST00000593678 USP6NLQ92738 828 aa16.37■□□□□ 0.21
GTF2F1-202ENST00000593678 STRA6Q9BX79 667 aa16.37■□□□□ 0.21
GTF2F1-202ENST00000593678 NDST4Q9H3R1 872 aa16.37■□□□□ 0.21
GTF2F1-202ENST00000593678 XPNPEP1Q9NQW7 623 aa16.37■□□□□ 0.21
GTF2F1-202ENST00000593678 ARMCX3Q9UH62 379 aaPredicted RBP16.37■□□□□ 0.21
GTF2F1-202ENST00000593678 ZMYM2Q9UBW7 1377 aa16.37■□□□□ 0.21
GTF2F1-202ENST00000593678 DENND3A2RUS2 1198 aa16.36■□□□□ 0.21
GTF2F1-202ENST00000593678 TGFB1I1O43294 461 aa16.36■□□□□ 0.21
GTF2F1-202ENST00000593678 MARSP56192 900 aaKnown RBP16.36■□□□□ 0.21
GTF2F1-202ENST00000593678 SOX10P56693 466 aa16.36■□□□□ 0.21
GTF2F1-202ENST00000593678 LACTBP83111 547 aaPredicted RBP16.36■□□□□ 0.21
GTF2F1-202ENST00000593678 TARBP2Q15633 366 aaKnown RBP16.36■□□□□ 0.21
GTF2F1-202ENST00000593678 CCDC112Q8NEF3 446 aa16.36■□□□□ 0.21
GTF2F1-202ENST00000593678 TMEM143Q96AN5 459 aa16.36■□□□□ 0.21
GTF2F1-202ENST00000593678 NTPCRQ9BSD7 190 aaKnown RBP16.36■□□□□ 0.21
GTF2F1-202ENST00000593678 AGPAT3Q9NRZ7 376 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms