RNA–Protein interactions for RNA: ENST00000592467.1

CIRBP-239, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-239ENST00000592467 GPM6BQ13491 265 aa22.61■■□□□ 1.21
CIRBP-239ENST00000592467 BTG3Q14201 252 aaPredicted RBP22.61■■□□□ 1.21
CIRBP-239ENST00000592467 CTTNQ14247 550 aaKnown RBP22.61■■□□□ 1.21
CIRBP-239ENST00000592467 TJAP1Q5JTD0 557 aa22.61■■□□□ 1.21
CIRBP-239ENST00000592467 MRPL38Q96DV4 380 aaKnown RBP22.61■■□□□ 1.21
CIRBP-239ENST00000592467 ASB2Q96Q27 587 aa22.61■■□□□ 1.21
CIRBP-239ENST00000592467 FOXP1Q9H334 677 aaPredicted RBP22.61■■□□□ 1.21
CIRBP-239ENST00000592467 DHX33Q9H6R0 707 aaKnown RBP22.61■■□□□ 1.21
CIRBP-239ENST00000592467 TTC12Q9H892 705 aaPredicted RBP22.61■■□□□ 1.21
CIRBP-239ENST00000592467 PCDHA12Q9UN75 941 aa22.61■■□□□ 1.21
CIRBP-239ENST00000592467 MUC3AQ02505 3323 aa22.61■■□□□ 1.21
CIRBP-239ENST00000592467 MARCH6O60337 910 aa22.6■■□□□ 1.21
CIRBP-239ENST00000592467 DKC1O60832 514 aaKnown RBP eCLIP22.6■■□□□ 1.21
CIRBP-239ENST00000592467 FGFR4P22455 802 aa22.6■■□□□ 1.21
CIRBP-239ENST00000592467 TFF2Q03403 129 aa22.6■■□□□ 1.21
CIRBP-239ENST00000592467 EIF2AK1Q9BQI3 630 aaKnown RBP22.6■■□□□ 1.21
CIRBP-239ENST00000592467 RNF19AQ9NV58 838 aa22.6■■□□□ 1.21
CIRBP-239ENST00000592467 BRWD1Q9NSI6 2320 aa22.59■■□□□ 1.21
CIRBP-239ENST00000592467 A0A087WZ62 844 aa22.59■■□□□ 1.21
CIRBP-239ENST00000592467 DENND3A2RUS2 1198 aa22.59■■□□□ 1.21
CIRBP-239ENST00000592467 CSDE1O75534 798 aaKnown RBP22.59■■□□□ 1.21
CIRBP-239ENST00000592467 LYPLA2O95372 231 aa22.59■■□□□ 1.21
CIRBP-239ENST00000592467 RB1P06400 928 aa22.59■■□□□ 1.21
CIRBP-239ENST00000592467 YWHABP31946 246 aaKnown RBP22.59■■□□□ 1.21
CIRBP-239ENST00000592467 CTNNB1P35222 781 aa22.59■■□□□ 1.21
CIRBP-239ENST00000592467 CYP4A11Q02928 519 aa22.59■■□□□ 1.21
CIRBP-239ENST00000592467 SAFBQ15424 915 aaKnown RBP eCLIP22.59■■□□□ 1.21
CIRBP-239ENST00000592467 KSR1Q8IVT5 923 aa22.59■■□□□ 1.21
CIRBP-239ENST00000592467 TBC1D32Q96NH3 1257 aa22.59■■□□□ 1.21
CIRBP-239ENST00000592467 FDXACB1Q9BRP7 624 aaPredicted RBP22.59■■□□□ 1.21
CIRBP-239ENST00000592467 ELAC1Q9H777 363 aaKnown RBP22.59■■□□□ 1.21
CIRBP-239ENST00000592467 ZSWIM4Q9H7M6 989 aa22.59■■□□□ 1.21
CIRBP-239ENST00000592467 SUCLA2Q9P2R7 463 aaPredicted RBP22.59■■□□□ 1.21
CIRBP-239ENST00000592467 PPME1Q9Y570 386 aa22.59■■□□□ 1.21
CIRBP-239ENST00000592467 PLXNA4Q9HCM2 1894 aa22.58■■□□□ 1.21
CIRBP-239ENST00000592467 TXKP42681 527 aa22.58■■□□□ 1.21
CIRBP-239ENST00000592467 MRPS5P82675 430 aaKnown RBP22.58■■□□□ 1.21
CIRBP-239ENST00000592467 PAN2Q504Q3 1202 aaKnown RBP22.58■■□□□ 1.21
CIRBP-239ENST00000592467 FAM102BQ5T8I3 360 aa22.58■■□□□ 1.21
CIRBP-239ENST00000592467 NLRP7Q8WX94 980 aa22.58■■□□□ 1.21
CIRBP-239ENST00000592467 CEP170P1Q96L14 293 aa22.58■■□□□ 1.21
CIRBP-239ENST00000592467 TMEM161AQ9NX61 479 aa22.58■■□□□ 1.21
CIRBP-239ENST00000592467 RWDD3Q9Y3V2 267 aa22.58■■□□□ 1.21
CIRBP-239ENST00000592467 PCDHB7Q9Y5E2 793 aa22.58■■□□□ 1.21
CIRBP-239ENST00000592467 GRM6O15303 877 aa22.57■■□□□ 1.2
CIRBP-239ENST00000592467 U2AF2P26368 475 aaKnown RBP eCLIP22.57■■□□□ 1.2
CIRBP-239ENST00000592467 MCM7P33993 719 aa22.57■■□□□ 1.2
CIRBP-239ENST00000592467 CDC42EP1Q00587 391 aa22.57■■□□□ 1.2
CIRBP-239ENST00000592467 CAMK1Q14012 370 aa22.57■■□□□ 1.2
CIRBP-239ENST00000592467 ZNF410Q86VK4 478 aa22.57■■□□□ 1.2
CIRBP-239ENST00000592467 NOSTRINQ8IVI9 506 aa22.57■■□□□ 1.2
CIRBP-239ENST00000592467 TMX3Q96JJ7 454 aa22.57■■□□□ 1.2
CIRBP-239ENST00000592467 JPH2Q9BR39 696 aaPredicted RBP22.57■■□□□ 1.2
CIRBP-239ENST00000592467 IFT122Q9HBG6 1241 aa22.57■■□□□ 1.2
CIRBP-239ENST00000592467 LRFN2Q9ULH4 789 aa22.57■■□□□ 1.2
CIRBP-239ENST00000592467 MYO7AQ13402 2215 aa22.57■■□□□ 1.2
CIRBP-239ENST00000592467 POTEMA6NI47 508 aa22.56■■□□□ 1.2
CIRBP-239ENST00000592467 FGFR1P11362 822 aa22.56■■□□□ 1.2
CIRBP-239ENST00000592467 BMP1P13497 986 aa22.56■■□□□ 1.2
CIRBP-239ENST00000592467 ATP2B1P20020 1258 aa22.56■■□□□ 1.2
CIRBP-239ENST00000592467 RFC5P40937 340 aa22.56■■□□□ 1.2
CIRBP-239ENST00000592467 DNM2P50570 870 aa22.56■■□□□ 1.2
CIRBP-239ENST00000592467 SKIV2LQ15477 1246 aaKnown RBP22.56■■□□□ 1.2
CIRBP-239ENST00000592467 RHPN2Q8IUC4 686 aa22.56■■□□□ 1.2
CIRBP-239ENST00000592467 TPH2Q8IWU9 490 aa22.56■■□□□ 1.2
CIRBP-239ENST00000592467 C4orf32Q8N8J7 132 aa22.56■■□□□ 1.2
CIRBP-239ENST00000592467 FAM184AQ8NB25 1140 aa22.56■■□□□ 1.2
CIRBP-239ENST00000592467 IL27Q8NEV9 243 aa22.56■■□□□ 1.2
CIRBP-239ENST00000592467 NEK9Q8TD19 979 aa22.56■■□□□ 1.2
CIRBP-239ENST00000592467 P2RX5Q93086 422 aa22.56■■□□□ 1.2
CIRBP-239ENST00000592467 PLVAPQ9BX97 442 aa22.56■■□□□ 1.2
CIRBP-239ENST00000592467 GCOM2Q9BZD3 368 aaPredicted RBP22.56■■□□□ 1.2
CIRBP-239ENST00000592467 XPNPEP1Q9NQW7 623 aa22.56■■□□□ 1.2
CIRBP-239ENST00000592467 HCSTQ9UBK5 93 aa22.56■■□□□ 1.2
CIRBP-239ENST00000592467 COG5Q9UP83 839 aa22.56■■□□□ 1.2
CIRBP-239ENST00000592467 TTC28Q96AY4 2481 aa22.56■■□□□ 1.2
CIRBP-239ENST00000592467 TCF20Q9UGU0 1960 aaKnown RBP22.56■■□□□ 1.2
CIRBP-239ENST00000592467 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP22.55■■□□□ 1.2
CIRBP-239ENST00000592467 ST18O60284 1047 aa22.55■■□□□ 1.2
CIRBP-239ENST00000592467 SPATA31C1P0DKV0 1188 aa22.55■■□□□ 1.2
CIRBP-239ENST00000592467 ATF7P17544 494 aaPredicted RBP22.55■■□□□ 1.2
CIRBP-239ENST00000592467 TOB1P50616 345 aaPredicted RBP22.55■■□□□ 1.2
CIRBP-239ENST00000592467 ORC2Q13416 577 aaPredicted RBP22.55■■□□□ 1.2
CIRBP-239ENST00000592467 ZNF174Q15697 407 aa22.55■■□□□ 1.2
CIRBP-239ENST00000592467 PTPROQ16827 1216 aa22.55■■□□□ 1.2
CIRBP-239ENST00000592467 ZNF598Q86UK7 904 aaKnown RBP22.55■■□□□ 1.2
CIRBP-239ENST00000592467 ECHDC2Q86YB7 292 aa22.55■■□□□ 1.2
CIRBP-239ENST00000592467 SLC7A3Q8WY07 619 aa22.55■■□□□ 1.2
CIRBP-239ENST00000592467 TMEM143Q96AN5 459 aa22.55■■□□□ 1.2
CIRBP-239ENST00000592467 C11orf84Q9BUA3 381 aaPredicted RBP22.55■■□□□ 1.2
CIRBP-239ENST00000592467 PLAGL2Q9UPG8 496 aa22.55■■□□□ 1.2
CIRBP-239ENST00000592467 IBSPP21815 317 aaPredicted RBP22.54■■□□□ 1.2
CIRBP-239ENST00000592467 DNAJB1P25685 340 aa22.54■■□□□ 1.2
CIRBP-239ENST00000592467 KCNQ1P51787 676 aa22.54■■□□□ 1.2
CIRBP-239ENST00000592467 POLGP54098 1239 aaPredicted RBP22.54■■□□□ 1.2
CIRBP-239ENST00000592467 COL19A1Q14993 1142 aa22.54■■□□□ 1.2
CIRBP-239ENST00000592467 EMC2Q15006 297 aa22.54■■□□□ 1.2
CIRBP-239ENST00000592467 XKR9Q5GH70 373 aa22.54■■□□□ 1.2
CIRBP-239ENST00000592467 OTUD6AQ7L8S5 288 aa22.54■■□□□ 1.2
CIRBP-239ENST00000592467 PRPF31Q8WWY3 499 aaKnown RBP22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms