RNA–Protein interactions for RNA: ENST00000592412.5

CIRBP-238, Transcript of cold inducible RNA binding protein, human

TSL 4

Gene CIRBP, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-238	ENST00000592412	SET	Q01105	290 aa	Predicted RBP	20.71	■□□□□ 0.91
CIRBP-238	ENST00000592412	RNF20	Q5VTR2	975 aa		20.71	■□□□□ 0.91
CIRBP-238	ENST00000592412	EFCAB12	Q6NXP0	572 aa		20.71	■□□□□ 0.91
CIRBP-238	ENST00000592412	ZNF598	Q86UK7	904 aa	Known RBP	20.71	■□□□□ 0.91
CIRBP-238	ENST00000592412	LRRC43	Q8N309	656 aa		20.71	■□□□□ 0.91
CIRBP-238	ENST00000592412	PRRX2	Q99811	253 aa		20.71	■□□□□ 0.91
CIRBP-238	ENST00000592412	NGRN	Q9NPE2	291 aa	Known RBP	20.71	■□□□□ 0.91
CIRBP-238	ENST00000592412	FAM86C1	Q9NVL1	165 aa		20.71	■□□□□ 0.91
CIRBP-238	ENST00000592412	AKT3	Q9Y243	479 aa		20.71	■□□□□ 0.91
CIRBP-238	ENST00000592412	PSAP	P07602	524 aa		20.7	■□□□□ 0.9
CIRBP-238	ENST00000592412	EIF4B	P23588	611 aa	Known RBP	20.7	■□□□□ 0.9
CIRBP-238	ENST00000592412	AVPR2	P30518	371 aa		20.7	■□□□□ 0.9
CIRBP-238	ENST00000592412	CIITA	P33076	1130 aa		20.7	■□□□□ 0.9
CIRBP-238	ENST00000592412	RCAN1	P53805	252 aa		20.7	■□□□□ 0.9
CIRBP-238	ENST00000592412	PRR16	Q569H4	304 aa		20.7	■□□□□ 0.9
CIRBP-238	ENST00000592412	SLC39A11	Q8N1S5	342 aa		20.7	■□□□□ 0.9
CIRBP-238	ENST00000592412	ZNF558	Q96NG5	402 aa		20.7	■□□□□ 0.9
CIRBP-238	ENST00000592412	PUF60	Q9UHX1	559 aa	Known RBP	20.7	■□□□□ 0.9
CIRBP-238	ENST00000592412	HCFC2	Q9Y5Z7	792 aa		20.7	■□□□□ 0.9
CIRBP-238	ENST00000592412	MAGEB2	O15479	319 aa		20.69	■□□□□ 0.9
CIRBP-238	ENST00000592412	HOXA2	O43364	376 aa		20.69	■□□□□ 0.9
CIRBP-238	ENST00000592412	SRGAP2B	P0DMP2	458 aa		20.69	■□□□□ 0.9
CIRBP-238	ENST00000592412	CPA1	P15085	419 aa		20.69	■□□□□ 0.9
CIRBP-238	ENST00000592412	HOXB8	P17481	243 aa	Predicted RBP	20.69	■□□□□ 0.9
CIRBP-238	ENST00000592412	FGFR4	P22455	802 aa		20.69	■□□□□ 0.9
CIRBP-238	ENST00000592412	PPM1A	P35813	382 aa		20.69	■□□□□ 0.9
CIRBP-238	ENST00000592412	GPC3	P51654	580 aa		20.69	■□□□□ 0.9
CIRBP-238	ENST00000592412	UGCG	Q16739	394 aa		20.69	■□□□□ 0.9
CIRBP-238	ENST00000592412	TMC7	Q7Z402	723 aa		20.69	■□□□□ 0.9
CIRBP-238	ENST00000592412	REXO1	Q8N1G1	1221 aa	Known RBP	20.69	■□□□□ 0.9
CIRBP-238	ENST00000592412	SPG21	Q9NZD8	308 aa		20.69	■□□□□ 0.9
CIRBP-238	ENST00000592412	CEP131	Q9UPN4	1083 aa		20.69	■□□□□ 0.9
CIRBP-238	ENST00000592412	SPTBN4	Q9H254	2564 aa		20.68	■□□□□ 0.9
CIRBP-238	ENST00000592412	C2orf71	A6NGG8	1288 aa		20.68	■□□□□ 0.9
CIRBP-238	ENST00000592412	OAT	P04181	439 aa		20.68	■□□□□ 0.9
CIRBP-238	ENST00000592412	DARS	P14868	501 aa	Known RBP	20.68	■□□□□ 0.9
CIRBP-238	ENST00000592412	MRPL43	Q8N983	215 aa	Known RBP	20.68	■□□□□ 0.9
CIRBP-238	ENST00000592412	HELQ	Q8TDG4	1101 aa		20.68	■□□□□ 0.9
CIRBP-238	ENST00000592412	MAP7D2	Q96T17	732 aa		20.68	■□□□□ 0.9
CIRBP-238	ENST00000592412	POMK	Q9H5K3	350 aa		20.68	■□□□□ 0.9
CIRBP-238	ENST00000592412	NID2	Q14112	1375 aa		20.68	■□□□□ 0.9
CIRBP-238	ENST00000592412		A0A0U1RQF3	1178 aa		20.67	■□□□□ 0.9
CIRBP-238	ENST00000592412	C2CD4D	B7Z1M9	353 aa		20.67	■□□□□ 0.9
CIRBP-238	ENST00000592412	CSDE1	O75534	798 aa	Known RBP	20.67	■□□□□ 0.9
CIRBP-238	ENST00000592412	ZSCAN20	P17040	1043 aa	Predicted RBP	20.67	■□□□□ 0.9
CIRBP-238	ENST00000592412	METAP2	P50579	478 aa	Known RBP eCLIP	20.67	■□□□□ 0.9
CIRBP-238	ENST00000592412	PRKCE	Q02156	737 aa		20.67	■□□□□ 0.9
CIRBP-238	ENST00000592412	DRP2	Q13474	957 aa		20.67	■□□□□ 0.9
CIRBP-238	ENST00000592412	BMP2KL	Q5H9B9	411 aa		20.67	■□□□□ 0.9
CIRBP-238	ENST00000592412	RNF169	Q8NCN4	708 aa		20.67	■□□□□ 0.9
CIRBP-238	ENST00000592412	FAM167A	Q96KS9	214 aa		20.67	■□□□□ 0.9
CIRBP-238	ENST00000592412	SMOC2	Q9H3U7	446 aa		20.67	■□□□□ 0.9
CIRBP-238	ENST00000592412	C6orf50	Q9HD87	102 aa		20.67	■□□□□ 0.9
CIRBP-238	ENST00000592412	PLXNA3	P51805	1871 aa		20.67	■□□□□ 0.9
CIRBP-238	ENST00000592412	WDR64	B1ANS9	1081 aa		20.66	■□□□□ 0.9
CIRBP-238	ENST00000592412	NT5C1B-RDH14	C9J2C7	533 aa		20.66	■□□□□ 0.9
CIRBP-238	ENST00000592412	MSH4	O15457	936 aa		20.66	■□□□□ 0.9
CIRBP-238	ENST00000592412	CLASP2	O75122	1294 aa	Known RBP	20.66	■□□□□ 0.9
CIRBP-238	ENST00000592412	BRD1	O95696	1058 aa		20.66	■□□□□ 0.9
CIRBP-238	ENST00000592412	KRT17	Q04695	432 aa		20.66	■□□□□ 0.9
CIRBP-238	ENST00000592412	SMC1A	Q14683	1233 aa	Known RBP	20.66	■□□□□ 0.9
CIRBP-238	ENST00000592412	TMEM173	Q86WV6	379 aa	Predicted RBP	20.66	■□□□□ 0.9
CIRBP-238	ENST00000592412	ABI1	Q8IZP0	508 aa		20.66	■□□□□ 0.9
CIRBP-238	ENST00000592412	KREMEN2	Q8NCW0	462 aa		20.66	■□□□□ 0.9
CIRBP-238	ENST00000592412	FEZF2	Q8TBJ5	459 aa		20.66	■□□□□ 0.9
CIRBP-238	ENST00000592412	CASP10	Q92851	521 aa		20.66	■□□□□ 0.9
CIRBP-238	ENST00000592412	GJA10	Q969M2	543 aa		20.66	■□□□□ 0.9
CIRBP-238	ENST00000592412	RIPOR3	Q96MK2	946 aa		20.66	■□□□□ 0.9
CIRBP-238	ENST00000592412	CEP89	Q96ST8	783 aa		20.66	■□□□□ 0.9
CIRBP-238	ENST00000592412	ADAM7	Q9H2U9	754 aa		20.66	■□□□□ 0.9
CIRBP-238	ENST00000592412	DISC1	Q9NRI5	854 aa		20.66	■□□□□ 0.9
CIRBP-238	ENST00000592412	SAMM50	Q9Y512	469 aa		20.66	■□□□□ 0.9
CIRBP-238	ENST00000592412	PRPF3	O43395	683 aa	Known RBP	20.65	■□□□□ 0.9
CIRBP-238	ENST00000592412	ST18	O60284	1047 aa		20.65	■□□□□ 0.9
CIRBP-238	ENST00000592412	TMOD1	P28289	359 aa		20.65	■□□□□ 0.9
CIRBP-238	ENST00000592412	TARBP2	Q15633	366 aa	Known RBP	20.65	■□□□□ 0.9
CIRBP-238	ENST00000592412	NTRK3	Q16288	839 aa		20.65	■□□□□ 0.9
CIRBP-238	ENST00000592412	MCTP2	Q6DN12	878 aa		20.65	■□□□□ 0.9
CIRBP-238	ENST00000592412	PHKB	Q93100	1093 aa		20.65	■□□□□ 0.9
CIRBP-238	ENST00000592412	TSHZ2	Q9NRE2	1034 aa		20.65	■□□□□ 0.9
CIRBP-238	ENST00000592412	NAP1L2	Q9ULW6	460 aa	Predicted RBP	20.65	■□□□□ 0.9
CIRBP-238	ENST00000592412	EOMES	O95936	686 aa		20.64	■□□□□ 0.89
CIRBP-238	ENST00000592412	WEE2	P0C1S8	567 aa		20.64	■□□□□ 0.89
CIRBP-238	ENST00000592412	BCAR1	P56945	870 aa		20.64	■□□□□ 0.89
CIRBP-238	ENST00000592412	KRT32	Q14532	448 aa		20.64	■□□□□ 0.89
CIRBP-238	ENST00000592412	KANK3	Q6NY19	840 aa		20.64	■□□□□ 0.89
CIRBP-238	ENST00000592412	ZBTB33	Q86T24	672 aa		20.64	■□□□□ 0.89
CIRBP-238	ENST00000592412	ZBP1	Q9H171	429 aa		20.64	■□□□□ 0.89
CIRBP-238	ENST00000592412	UNC45A	Q9H3U1	944 aa		20.64	■□□□□ 0.89
CIRBP-238	ENST00000592412	TCEAL9	Q9UHQ7	104 aa		20.64	■□□□□ 0.89
CIRBP-238	ENST00000592412	SORCS3	Q9UPU3	1222 aa		20.64	■□□□□ 0.89
CIRBP-238	ENST00000592412	NR2E1	Q9Y466	385 aa		20.64	■□□□□ 0.89
CIRBP-238	ENST00000592412	MYO10	Q9HD67	2058 aa		20.64	■□□□□ 0.89
CIRBP-238	ENST00000592412	TMEM150B	A6NC51	233 aa		20.63	■□□□□ 0.89
CIRBP-238	ENST00000592412		H0Y858	1186 aa		20.63	■□□□□ 0.89
CIRBP-238	ENST00000592412	CHMP2A	O43633	222 aa		20.63	■□□□□ 0.89
CIRBP-238	ENST00000592412	STBD1	O95210	358 aa		20.63	■□□□□ 0.89
CIRBP-238	ENST00000592412	GNA11	P29992	359 aa		20.63	■□□□□ 0.89
CIRBP-238	ENST00000592412	ITIH3	Q06033	890 aa		20.63	■□□□□ 0.89
CIRBP-238	ENST00000592412	TPRN	Q4KMQ1	711 aa		20.63	■□□□□ 0.89

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