RNA–Protein interactions for RNA: ENST00000590096.1

ATG4D-212, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 1,282 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-212ENST00000590096 OSMRQ99650 979 aa23.71■■□□□ 1.39
ATG4D-212ENST00000590096 OSBPL7Q9BZF2 842 aa23.71■■□□□ 1.39
ATG4D-212ENST00000590096 BHMT2Q9H2M3 363 aa23.71■■□□□ 1.39
ATG4D-212ENST00000590096 EFCAB14O75071 495 aa23.7■■□□□ 1.38
ATG4D-212ENST00000590096 PPP6R2O75170 966 aa23.7■■□□□ 1.38
ATG4D-212ENST00000590096 KCNJ6P48051 423 aa23.7■■□□□ 1.38
ATG4D-212ENST00000590096 GPC3P51654 580 aa23.7■■□□□ 1.38
ATG4D-212ENST00000590096 DNM1Q05193 864 aaKnown RBP23.7■■□□□ 1.38
ATG4D-212ENST00000590096 PAK2Q13177 524 aa23.7■■□□□ 1.38
ATG4D-212ENST00000590096 RASIP1Q5U651 963 aa23.7■■□□□ 1.38
ATG4D-212ENST00000590096 CDHR5Q9HBB8 845 aa23.7■■□□□ 1.38
ATG4D-212ENST00000590096 SLC4A7Q9Y6M7 1214 aa23.7■■□□□ 1.38
ATG4D-212ENST00000590096 ABHD14A-ACY1A0A1B0GW23 586 aa23.69■■□□□ 1.38
ATG4D-212ENST00000590096 E9PMD0 336 aa23.69■■□□□ 1.38
ATG4D-212ENST00000590096 RPS6KA5O75582 802 aa23.69■■□□□ 1.38
ATG4D-212ENST00000590096 EYA4O95677 639 aa23.69■■□□□ 1.38
ATG4D-212ENST00000590096 TXLNAP40222 546 aa23.69■■□□□ 1.38
ATG4D-212ENST00000590096 GRB10Q13322 594 aa23.69■■□□□ 1.38
ATG4D-212ENST00000590096 ODR4Q5SWX8 454 aa23.69■■□□□ 1.38
ATG4D-212ENST00000590096 PADI6Q6TGC4 694 aa23.69■■□□□ 1.38
ATG4D-212ENST00000590096 ZNF410Q86VK4 478 aa23.69■■□□□ 1.38
ATG4D-212ENST00000590096 MCPH1Q8NEM0 835 aa23.69■■□□□ 1.38
ATG4D-212ENST00000590096 KCNG4Q8TDN1 519 aa23.69■■□□□ 1.38
ATG4D-212ENST00000590096 ZNF668Q96K58 619 aaPredicted RBP23.69■■□□□ 1.38
ATG4D-212ENST00000590096 CLIC6Q96NY7 704 aa23.69■■□□□ 1.38
ATG4D-212ENST00000590096 PNMA5Q96PV4 448 aa23.69■■□□□ 1.38
ATG4D-212ENST00000590096 PLIN2Q99541 437 aa23.69■■□□□ 1.38
ATG4D-212ENST00000590096 ADAMTS10Q9H324 1103 aa23.69■■□□□ 1.38
ATG4D-212ENST00000590096 XPNPEP1Q9NQW7 623 aa23.69■■□□□ 1.38
ATG4D-212ENST00000590096 CXXC1Q9P0U4 656 aaPredicted RBP23.69■■□□□ 1.38
ATG4D-212ENST00000590096 COL4A3BPQ9Y5P4 624 aa23.69■■□□□ 1.38
ATG4D-212ENST00000590096 NCLP19338 710 aaKnown RBP23.68■■□□□ 1.38
ATG4D-212ENST00000590096 CD52P31358 61 aa23.68■■□□□ 1.38
ATG4D-212ENST00000590096 LRIT3Q3SXY7 679 aa23.68■■□□□ 1.38
ATG4D-212ENST00000590096 SPECC1Q5M775 1068 aa23.68■■□□□ 1.38
ATG4D-212ENST00000590096 PRPF31Q8WWY3 499 aaKnown RBP23.68■■□□□ 1.38
ATG4D-212ENST00000590096 GCOM2Q9BZD3 368 aaPredicted RBP23.68■■□□□ 1.38
ATG4D-212ENST00000590096 CCSER1Q9C0I3 900 aa23.68■■□□□ 1.38
ATG4D-212ENST00000590096 AGO3Q9H9G7 860 aaKnown RBP23.68■■□□□ 1.38
ATG4D-212ENST00000590096 NOC2LQ9Y3T9 749 aaKnown RBP23.68■■□□□ 1.38
ATG4D-212ENST00000590096 ASAP2O43150 1006 aa23.67■■□□□ 1.38
ATG4D-212ENST00000590096 KRT85P78386 507 aa23.67■■□□□ 1.38
ATG4D-212ENST00000590096 MXD4Q14582 209 aaPredicted RBP23.67■■□□□ 1.38
ATG4D-212ENST00000590096 TCTN1Q2MV58 587 aa23.67■■□□□ 1.38
ATG4D-212ENST00000590096 TMEM119Q4V9L6 283 aa23.67■■□□□ 1.38
ATG4D-212ENST00000590096 TMEM40Q8WWA1 233 aa23.67■■□□□ 1.38
ATG4D-212ENST00000590096 SYMPKQ92797 1274 aaKnown RBP23.67■■□□□ 1.38
ATG4D-212ENST00000590096 EPSTI1Q96J88 318 aa23.67■■□□□ 1.38
ATG4D-212ENST00000590096 NLRP4Q96MN2 994 aa23.67■■□□□ 1.38
ATG4D-212ENST00000590096 CCDC39Q9UFE4 941 aa23.67■■□□□ 1.38
ATG4D-212ENST00000590096 PADI3Q9ULW8 664 aa23.67■■□□□ 1.38
ATG4D-212ENST00000590096 MICAL3Q7RTP6 2002 aa23.66■■□□□ 1.38
ATG4D-212ENST00000590096 A0A087WZ62 844 aa23.66■■□□□ 1.38
ATG4D-212ENST00000590096 GPR182O15218 404 aa23.66■■□□□ 1.38
ATG4D-212ENST00000590096 CYP11B2P19099 503 aa23.66■■□□□ 1.38
ATG4D-212ENST00000590096 EIF4BP23588 611 aaKnown RBP23.66■■□□□ 1.38
ATG4D-212ENST00000590096 WDR5P61964 334 aaKnown RBP23.66■■□□□ 1.38
ATG4D-212ENST00000590096 LAMTOR4Q0VGL1 99 aa23.66■■□□□ 1.38
ATG4D-212ENST00000590096 NFX1Q12986 1120 aaKnown RBP23.66■■□□□ 1.38
ATG4D-212ENST00000590096 KARSQ15046 597 aaKnown RBP23.66■■□□□ 1.38
ATG4D-212ENST00000590096 FAM102BQ5T8I3 360 aa23.66■■□□□ 1.38
ATG4D-212ENST00000590096 MAEAQ7L5Y9 396 aa23.66■■□□□ 1.38
ATG4D-212ENST00000590096 KCNK18Q7Z418 384 aa23.66■■□□□ 1.38
ATG4D-212ENST00000590096 KSR1Q8IVT5 923 aa23.66■■□□□ 1.38
ATG4D-212ENST00000590096 FDXACB1Q9BRP7 624 aaPredicted RBP23.66■■□□□ 1.38
ATG4D-212ENST00000590096 FTHL17Q9BXU8 183 aa23.66■■□□□ 1.38
ATG4D-212ENST00000590096 INO80BQ9C086 356 aaPredicted RBP23.66■■□□□ 1.38
ATG4D-212ENST00000590096 POLR3FQ9H1D9 316 aaPredicted RBP23.66■■□□□ 1.38
ATG4D-212ENST00000590096 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.65■■□□□ 1.38
ATG4D-212ENST00000590096 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.65■■□□□ 1.38
ATG4D-212ENST00000590096 SSBP05455 408 aaKnown RBP eCLIP23.65■■□□□ 1.38
ATG4D-212ENST00000590096 DARSP14868 501 aaKnown RBP23.65■■□□□ 1.38
ATG4D-212ENST00000590096 DDIT3P35638 169 aa23.65■■□□□ 1.38
ATG4D-212ENST00000590096 TFDP1Q14186 410 aa23.65■■□□□ 1.38
ATG4D-212ENST00000590096 SLC9A7Q96T83 725 aa23.65■■□□□ 1.38
ATG4D-212ENST00000590096 RBAK-RBAKDNI3L0D1 243 aa23.64■■□□□ 1.37
ATG4D-212ENST00000590096 CUTAO60888 179 aa23.64■■□□□ 1.37
ATG4D-212ENST00000590096 SRGAP2CP0DJJ0 459 aa23.64■■□□□ 1.37
ATG4D-212ENST00000590096 ATP2A2P16615 1042 aaKnown RBP23.64■■□□□ 1.37
ATG4D-212ENST00000590096 PLCG1P19174 1290 aa23.64■■□□□ 1.37
ATG4D-212ENST00000590096 ARL2P36404 184 aa23.64■■□□□ 1.37
ATG4D-212ENST00000590096 ME1P48163 572 aa23.64■■□□□ 1.37
ATG4D-212ENST00000590096 FAM43BQ6ZT52 329 aaPredicted RBP23.64■■□□□ 1.37
ATG4D-212ENST00000590096 USP49Q70CQ1 688 aa23.64■■□□□ 1.37
ATG4D-212ENST00000590096 FAM228AQ86W67 206 aa23.64■■□□□ 1.37
ATG4D-212ENST00000590096 RNF149Q8NC42 400 aa23.64■■□□□ 1.37
ATG4D-212ENST00000590096 PHOSPHO2Q8TCD6 241 aa23.64■■□□□ 1.37
ATG4D-212ENST00000590096 ERVK-5Q9HDB9 667 aa23.64■■□□□ 1.37
ATG4D-212ENST00000590096 ST3GAL5Q9UNP4 418 aa23.64■■□□□ 1.37
ATG4D-212ENST00000590096 AMHP03971 560 aa23.63■■□□□ 1.37
ATG4D-212ENST00000590096 PLA2G4BP0C869 781 aa23.63■■□□□ 1.37
ATG4D-212ENST00000590096 SFPQP23246 707 aaKnown RBP eCLIP23.63■■□□□ 1.37
ATG4D-212ENST00000590096 PHKA2P46019 1235 aa23.63■■□□□ 1.37
ATG4D-212ENST00000590096 SYT2Q8N9I0 419 aaPredicted RBP23.63■■□□□ 1.37
ATG4D-212ENST00000590096 ASAP3Q8TDY4 903 aa23.63■■□□□ 1.37
ATG4D-212ENST00000590096 SPATA32Q96LK8 384 aa23.63■■□□□ 1.37
ATG4D-212ENST00000590096 GPRC5CQ9NQ84 441 aa23.63■■□□□ 1.37
ATG4D-212ENST00000590096 RCOR1Q9UKL0 485 aa23.63■■□□□ 1.37
ATG4D-212ENST00000590096 GLRA2P23416 452 aa23.62■■□□□ 1.37
ATG4D-212ENST00000590096 SMAD3P84022 425 aaKnown RBP23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms