RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 HOXB8P17481 243 aaPredicted RBP13.47□□□□□ -0.25
BRCA1-225ENST00000586385 EIF4BP23588 611 aaKnown RBP13.47□□□□□ -0.25
BRCA1-225ENST00000586385 CIITAP33076 1130 aa13.47□□□□□ -0.25
BRCA1-225ENST00000586385 DRP2Q13474 957 aa13.47□□□□□ -0.25
BRCA1-225ENST00000586385 EFCAB12Q6NXP0 572 aa13.47□□□□□ -0.25
BRCA1-225ENST00000586385 KANK3Q6NY19 840 aa13.47□□□□□ -0.25
BRCA1-225ENST00000586385 TMEM173Q86WV6 379 aaPredicted RBP13.47□□□□□ -0.25
BRCA1-225ENST00000586385 CKAP2LQ8IYA6 745 aa13.47□□□□□ -0.25
BRCA1-225ENST00000586385 LRRC43Q8N309 656 aa13.47□□□□□ -0.25
BRCA1-225ENST00000586385 MRPL43Q8N983 215 aaKnown RBP13.47□□□□□ -0.25
BRCA1-225ENST00000586385 KREMEN2Q8NCW0 462 aa13.47□□□□□ -0.25
BRCA1-225ENST00000586385 SNX27Q96L92 541 aa13.47□□□□□ -0.25
BRCA1-225ENST00000586385 RIPOR3Q96MK2 946 aa13.47□□□□□ -0.25
BRCA1-225ENST00000586385 GLT8D2Q9H1C3 349 aa13.47□□□□□ -0.25
BRCA1-225ENST00000586385 NGRNQ9NPE2 291 aaKnown RBP13.47□□□□□ -0.25
BRCA1-225ENST00000586385 TBC1D22BQ9NU19 505 aa13.47□□□□□ -0.25
BRCA1-225ENST00000586385 RNF216Q9NWF9 866 aaPredicted RBP13.47□□□□□ -0.25
BRCA1-225ENST00000586385 SPG21Q9NZD8 308 aa13.47□□□□□ -0.25
BRCA1-225ENST00000586385 PCDHA10Q9Y5I2 948 aa13.47□□□□□ -0.25
BRCA1-225ENST00000586385 HCFC2Q9Y5Z7 792 aa13.47□□□□□ -0.25
BRCA1-225ENST00000586385 USP34Q70CQ2 3546 aa13.47□□□□□ -0.25
BRCA1-225ENST00000586385 ZFHX2Q9C0A1 2572 aaPredicted RBP13.46□□□□□ -0.25
BRCA1-225ENST00000586385 EVPLQ92817 2033 aa13.46□□□□□ -0.25
BRCA1-225ENST00000586385 A0A0U1RQF3 1178 aa13.46□□□□□ -0.25
BRCA1-225ENST00000586385 ST18O60284 1047 aa13.46□□□□□ -0.25
BRCA1-225ENST00000586385 CSDE1O75534 798 aaKnown RBP13.46□□□□□ -0.25
BRCA1-225ENST00000586385 PSAPP07602 524 aa13.46□□□□□ -0.25
BRCA1-225ENST00000586385 WEE2P0C1S8 567 aa13.46□□□□□ -0.25
BRCA1-225ENST00000586385 DARSP14868 501 aaKnown RBP13.46□□□□□ -0.25
BRCA1-225ENST00000586385 GPC3P51654 580 aa13.46□□□□□ -0.25
BRCA1-225ENST00000586385 RCAN1P53805 252 aa13.46□□□□□ -0.25
BRCA1-225ENST00000586385 TARBP2Q15633 366 aaKnown RBP13.46□□□□□ -0.25
BRCA1-225ENST00000586385 PRR16Q569H4 304 aa13.46□□□□□ -0.25
BRCA1-225ENST00000586385 TMC7Q7Z402 723 aa13.46□□□□□ -0.25
BRCA1-225ENST00000586385 SMAP1Q8IYB5 467 aaPredicted RBP13.46□□□□□ -0.25
BRCA1-225ENST00000586385 HELQQ8TDG4 1101 aa13.46□□□□□ -0.25
BRCA1-225ENST00000586385 BCL7CQ8WUZ0 217 aaPredicted RBP13.46□□□□□ -0.25
BRCA1-225ENST00000586385 GJA10Q969M2 543 aa13.46□□□□□ -0.25
BRCA1-225ENST00000586385 CEP89Q96ST8 783 aa13.46□□□□□ -0.25
BRCA1-225ENST00000586385 ADAM7Q9H2U9 754 aa13.46□□□□□ -0.25
BRCA1-225ENST00000586385 PUF60Q9UHX1 559 aaKnown RBP13.46□□□□□ -0.25
BRCA1-225ENST00000586385 AKT3Q9Y243 479 aa13.46□□□□□ -0.25
BRCA1-225ENST00000586385 NT5C1B-RDH14C9J2C7 533 aa13.45□□□□□ -0.26
BRCA1-225ENST00000586385 H0Y858 1186 aa13.45□□□□□ -0.26
BRCA1-225ENST00000586385 MAGEB2O15479 319 aa13.45□□□□□ -0.26
BRCA1-225ENST00000586385 HOXA2O43364 376 aa13.45□□□□□ -0.26
BRCA1-225ENST00000586385 GFRA3O60609 400 aa13.45□□□□□ -0.26
BRCA1-225ENST00000586385 STBD1O95210 358 aa13.45□□□□□ -0.26
BRCA1-225ENST00000586385 OATP04181 439 aa13.45□□□□□ -0.26
BRCA1-225ENST00000586385 PPM1AP35813 382 aa13.45□□□□□ -0.26
BRCA1-225ENST00000586385 SETQ01105 290 aaPredicted RBP13.45□□□□□ -0.26
BRCA1-225ENST00000586385 PRKCEQ02156 737 aa13.45□□□□□ -0.26
BRCA1-225ENST00000586385 C12orf76Q8N812 135 aaPredicted RBP13.45□□□□□ -0.26
BRCA1-225ENST00000586385 TMEM105Q8N8V8 129 aa13.45□□□□□ -0.26
BRCA1-225ENST00000586385 RNF169Q8NCN4 708 aa13.45□□□□□ -0.26
BRCA1-225ENST00000586385 CASP10Q92851 521 aa13.45□□□□□ -0.26
BRCA1-225ENST00000586385 MAP7D2Q96T17 732 aa13.45□□□□□ -0.26
BRCA1-225ENST00000586385 CEP131Q9UPN4 1083 aa13.45□□□□□ -0.26
BRCA1-225ENST00000586385 TMEM150BA6NC51 233 aa13.44□□□□□ -0.26
BRCA1-225ENST00000586385 MEIS3P2A8K0S8 358 aa13.44□□□□□ -0.26
BRCA1-225ENST00000586385 MSH4O15457 936 aa13.44□□□□□ -0.26
BRCA1-225ENST00000586385 B4GALT3O60512 393 aa13.44□□□□□ -0.26
BRCA1-225ENST00000586385 ASGR2P07307 311 aa13.44□□□□□ -0.26
BRCA1-225ENST00000586385 SRGAP2BP0DMP2 458 aa13.44□□□□□ -0.26
BRCA1-225ENST00000586385 METAP2P50579 478 aaKnown RBP eCLIP13.44□□□□□ -0.26
BRCA1-225ENST00000586385 BCAR1P56945 870 aa13.44□□□□□ -0.26
BRCA1-225ENST00000586385 SMC1AQ14683 1233 aaKnown RBP13.44□□□□□ -0.26
BRCA1-225ENST00000586385 REXO1Q8N1G1 1221 aaKnown RBP13.44□□□□□ -0.26
BRCA1-225ENST00000586385 AUTS2Q8WXX7 1259 aa13.44□□□□□ -0.26
BRCA1-225ENST00000586385 FAM167AQ96KS9 214 aa13.44□□□□□ -0.26
BRCA1-225ENST00000586385 VN1R3Q9BXE9 311 aa13.44□□□□□ -0.26
BRCA1-225ENST00000586385 UNC45AQ9H3U1 944 aa13.44□□□□□ -0.26
BRCA1-225ENST00000586385 TSHZ2Q9NRE2 1034 aa13.44□□□□□ -0.26
BRCA1-225ENST00000586385 DISC1Q9NRI5 854 aa13.44□□□□□ -0.26
BRCA1-225ENST00000586385 CFAP54Q96N23 3096 aa13.44□□□□□ -0.26
BRCA1-225ENST00000586385 NID2Q14112 1375 aa13.44□□□□□ -0.26
BRCA1-225ENST00000586385 WDR64B1ANS9 1081 aa13.43□□□□□ -0.26
BRCA1-225ENST00000586385 PROB1E7EW31 1015 aa13.43□□□□□ -0.26
BRCA1-225ENST00000586385 PRPF3O43395 683 aaKnown RBP13.43□□□□□ -0.26
BRCA1-225ENST00000586385 GALR2O43603 387 aaPredicted RBP13.43□□□□□ -0.26
BRCA1-225ENST00000586385 EOMESO95936 686 aa13.43□□□□□ -0.26
BRCA1-225ENST00000586385 ZSCAN20P17040 1043 aaPredicted RBP13.43□□□□□ -0.26
BRCA1-225ENST00000586385 PLXNA3P51805 1871 aa13.43□□□□□ -0.26
BRCA1-225ENST00000586385 KRT17Q04695 432 aa13.43□□□□□ -0.26
BRCA1-225ENST00000586385 NTRK3Q16288 839 aa13.43□□□□□ -0.26
BRCA1-225ENST00000586385 TPRNQ4KMQ1 711 aa13.43□□□□□ -0.26
BRCA1-225ENST00000586385 BMP2KLQ5H9B9 411 aa13.43□□□□□ -0.26
BRCA1-225ENST00000586385 RNF20Q5VTR2 975 aa13.43□□□□□ -0.26
BRCA1-225ENST00000586385 B3GNT9Q6UX72 402 aa13.43□□□□□ -0.26
BRCA1-225ENST00000586385 ASCL5Q7RTU5 278 aa13.43□□□□□ -0.26
BRCA1-225ENST00000586385 ABI1Q8IZP0 508 aa13.43□□□□□ -0.26
BRCA1-225ENST00000586385 SLC22A17Q8WUG5 538 aa13.43□□□□□ -0.26
BRCA1-225ENST00000586385 ATOH1Q92858 354 aaPredicted RBP13.43□□□□□ -0.26
BRCA1-225ENST00000586385 SLC5A5Q92911 643 aa13.43□□□□□ -0.26
BRCA1-225ENST00000586385 KCNB2Q92953 911 aa13.43□□□□□ -0.26
BRCA1-225ENST00000586385 LPPQ93052 612 aa13.43□□□□□ -0.26
BRCA1-225ENST00000586385 PHKBQ93100 1093 aa13.43□□□□□ -0.26
BRCA1-225ENST00000586385 ZBP1Q9H171 429 aa13.43□□□□□ -0.26
BRCA1-225ENST00000586385 SORCS3Q9UPU3 1222 aa13.43□□□□□ -0.26
BRCA1-225ENST00000586385 IGKV6-21A0A0C4DH24 114 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms