RNA–Protein interactions for RNA: ENST00000580048.1

LINC00909-202, long intergenic non-protein coding RNA 909, humanhuman

TSL 1 (best) BASIC

Gene LINC00909, Length 3,463 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00909-202ENST00000580048 SLC9A1P19634 815 aa11.05□□□□□ -0.64
LINC00909-202ENST00000580048 CACNB1Q02641 598 aaPredicted RBP11.05□□□□□ -0.64
LINC00909-202ENST00000580048 PUM3Q15397 648 aaKnown RBP11.05□□□□□ -0.64
LINC00909-202ENST00000580048 FOXB2Q5VYV0 432 aa11.05□□□□□ -0.64
LINC00909-202ENST00000580048 SPTY2D1Q68D10 685 aaPredicted RBP11.05□□□□□ -0.64
LINC00909-202ENST00000580048 IRGCQ6NXR0 463 aa11.05□□□□□ -0.64
LINC00909-202ENST00000580048 NT5DC3Q86UY8 548 aa11.05□□□□□ -0.64
LINC00909-202ENST00000580048 VPS36Q86VN1 386 aa11.05□□□□□ -0.64
LINC00909-202ENST00000580048 KIAA0825Q8IV33 1275 aa11.05□□□□□ -0.64
LINC00909-202ENST00000580048 SYCE1Q8N0S2 351 aa11.05□□□□□ -0.64
LINC00909-202ENST00000580048 DENND2DQ9H6A0 471 aaPredicted RBP11.05□□□□□ -0.64
LINC00909-202ENST00000580048 CTTNBP2NLQ9P2B4 639 aa11.05□□□□□ -0.64
LINC00909-202ENST00000580048 PCDHA6Q9UN73 950 aa11.05□□□□□ -0.64
LINC00909-202ENST00000580048 PCDHA8Q9Y5H6 950 aa11.05□□□□□ -0.64
LINC00909-202ENST00000580048 FLT1P17948 1338 aa11.05□□□□□ -0.64
LINC00909-202ENST00000580048 RGPD2P0DJD1 1756 aa11.05□□□□□ -0.64
LINC00909-202ENST00000580048 TSPY2A6NKD2 308 aa11.05□□□□□ -0.64
LINC00909-202ENST00000580048 ABLIM1O14639 778 aa11.05□□□□□ -0.64
LINC00909-202ENST00000580048 DDAH1O94760 285 aa11.05□□□□□ -0.64
LINC00909-202ENST00000580048 SLC5A1P13866 664 aa11.05□□□□□ -0.64
LINC00909-202ENST00000580048 RPL21P46778 160 aaKnown RBP11.05□□□□□ -0.64
LINC00909-202ENST00000580048 PTENP60484 403 aa11.05□□□□□ -0.64
LINC00909-202ENST00000580048 DYNLL1P63167 89 aaKnown RBP11.05□□□□□ -0.64
LINC00909-202ENST00000580048 ZC2HC1CQ53FD0 456 aaPredicted RBP11.05□□□□□ -0.64
LINC00909-202ENST00000580048 DCAF17Q5H9S7 520 aaPredicted RBP11.05□□□□□ -0.64
LINC00909-202ENST00000580048 SNX30Q5VWJ9 437 aa11.05□□□□□ -0.64
LINC00909-202ENST00000580048 OR52E8Q6IFG1 317 aa11.05□□□□□ -0.64
LINC00909-202ENST00000580048 ZDHHC24Q6UX98 284 aa11.05□□□□□ -0.64
LINC00909-202ENST00000580048 UNC13DQ70J99 1090 aa11.05□□□□□ -0.64
LINC00909-202ENST00000580048 SRRM1Q8IYB3 904 aaKnown RBP11.05□□□□□ -0.64
LINC00909-202ENST00000580048 AGGF1Q8N302 714 aaeCLIP11.05□□□□□ -0.64
LINC00909-202ENST00000580048 OPTNQ96CV9 577 aa11.05□□□□□ -0.64
LINC00909-202ENST00000580048 BICD1Q96G01 975 aa11.05□□□□□ -0.64
LINC00909-202ENST00000580048 NT5C3AQ9H0P0 336 aa11.05□□□□□ -0.64
LINC00909-202ENST00000580048 MAGEF1Q9HAY2 307 aa11.05□□□□□ -0.64
LINC00909-202ENST00000580048 SUCLA2Q9P2R7 463 aaPredicted RBP11.05□□□□□ -0.64
LINC00909-202ENST00000580048 STOML1Q9UBI4 398 aa11.05□□□□□ -0.64
LINC00909-202ENST00000580048 RIC1Q4ADV7 1423 aa11.05□□□□□ -0.64
LINC00909-202ENST00000580048 KIAA0391O15091 583 aaKnown RBP11.05□□□□□ -0.64
LINC00909-202ENST00000580048 CCNB1P14635 433 aa11.05□□□□□ -0.64
LINC00909-202ENST00000580048 RCN1Q15293 331 aa11.05□□□□□ -0.64
LINC00909-202ENST00000580048 ADGRA1Q86SQ6 560 aa11.05□□□□□ -0.64
LINC00909-202ENST00000580048 MTA3Q9BTC8 594 aa11.05□□□□□ -0.64
LINC00909-202ENST00000580048 PREBQ9HCU5 417 aa11.05□□□□□ -0.64
LINC00909-202ENST00000580048 GALNT8Q9NY28 637 aa11.05□□□□□ -0.64
LINC00909-202ENST00000580048 PPP1R9AQ9ULJ8 1098 aa11.05□□□□□ -0.64
LINC00909-202ENST00000580048 MYH1P12882 1939 aa11.05□□□□□ -0.64
LINC00909-202ENST00000580048 USP17L12C9JPN9 530 aa11.04□□□□□ -0.64
LINC00909-202ENST00000580048 USP17L21D6R901 530 aa11.04□□□□□ -0.64
LINC00909-202ENST00000580048 PFDN1O60925 122 aa11.04□□□□□ -0.64
LINC00909-202ENST00000580048 DBN1Q16643 649 aa11.04□□□□□ -0.64
LINC00909-202ENST00000580048 CCDC152Q4G0S7 254 aa11.04□□□□□ -0.64
LINC00909-202ENST00000580048 RFX8Q6ZV50 586 aa11.04□□□□□ -0.64
LINC00909-202ENST00000580048 CROCCP2Q86T23 111 aa11.04□□□□□ -0.64
LINC00909-202ENST00000580048 CCDC105Q8IYK2 499 aa11.04□□□□□ -0.64
LINC00909-202ENST00000580048 SCG3Q8WXD2 468 aaKnown RBP11.04□□□□□ -0.64
LINC00909-202ENST00000580048 SEC14L1Q92503 715 aa11.04□□□□□ -0.64
LINC00909-202ENST00000580048 LARP4BQ92615 738 aaKnown RBP11.04□□□□□ -0.64
LINC00909-202ENST00000580048 DDX12PQ92771 950 aa11.04□□□□□ -0.64
LINC00909-202ENST00000580048 DYDC2Q96IM9 177 aa11.04□□□□□ -0.64
LINC00909-202ENST00000580048 LRCH1Q9Y2L9 728 aa11.04□□□□□ -0.64
LINC00909-202ENST00000580048 C5P01031 1676 aa11.04□□□□□ -0.64
LINC00909-202ENST00000580048 MCL1Q07820 350 aa11.04□□□□□ -0.64
LINC00909-202ENST00000580048 MAPK7Q13164 816 aa11.04□□□□□ -0.64
LINC00909-202ENST00000580048 DNAJC3Q13217 504 aa11.04□□□□□ -0.64
LINC00909-202ENST00000580048 MYLK4Q86YV6 388 aaPredicted RBP11.04□□□□□ -0.64
LINC00909-202ENST00000580048 APLFQ8IW19 511 aaPredicted RBP11.04□□□□□ -0.64
LINC00909-202ENST00000580048 RASGEF1CQ8N431 466 aa11.04□□□□□ -0.64
LINC00909-202ENST00000580048 ANKLE1Q8NAG6 615 aa11.04□□□□□ -0.64
LINC00909-202ENST00000580048 CKAP2Q8WWK9 683 aa11.04□□□□□ -0.64
LINC00909-202ENST00000580048 CPVLQ9H3G5 476 aa11.04□□□□□ -0.64
LINC00909-202ENST00000580048 MMADHCQ9H3L0 296 aaPredicted RBP11.04□□□□□ -0.64
LINC00909-202ENST00000580048 DNAAF2Q9NVR5 837 aaKnown RBP11.04□□□□□ -0.64
LINC00909-202ENST00000580048 AIPL1Q9NZN9 384 aa11.04□□□□□ -0.64
LINC00909-202ENST00000580048 A0A1W2PRG0 241 aa11.04□□□□□ -0.64
LINC00909-202ENST00000580048 E7ENQ6 273 aa11.04□□□□□ -0.64
LINC00909-202ENST00000580048 VHLP40337 213 aa11.04□□□□□ -0.64
LINC00909-202ENST00000580048 POU5F1Q01860 360 aaKnown RBP11.04□□□□□ -0.64
LINC00909-202ENST00000580048 DEUP1Q05D60 604 aa11.04□□□□□ -0.64
LINC00909-202ENST00000580048 MPP2Q14168 576 aa11.04□□□□□ -0.64
LINC00909-202ENST00000580048 ZRSR2Q15696 482 aaKnown RBP11.04□□□□□ -0.64
LINC00909-202ENST00000580048 KHDC1Q4VXA5 237 aaKnown RBP11.04□□□□□ -0.64
LINC00909-202ENST00000580048 VSTM1Q6UX27 236 aa11.04□□□□□ -0.64
LINC00909-202ENST00000580048 KIF6Q6ZMV9 814 aa11.04□□□□□ -0.64
LINC00909-202ENST00000580048 PPFIBP2Q8ND30 876 aa11.04□□□□□ -0.64
LINC00909-202ENST00000580048 LRMDAQ9H2I8 198 aa11.04□□□□□ -0.64
LINC00909-202ENST00000580048 TAOK3Q9H2K8 898 aa11.04□□□□□ -0.64
LINC00909-202ENST00000580048 DDX60Q8IY21 1712 aaKnown RBP11.03□□□□□ -0.64
LINC00909-202ENST00000580048 PFASO15067 1338 aa11.03□□□□□ -0.64
LINC00909-202ENST00000580048 KCNJ1P48048 391 aa11.03□□□□□ -0.64
LINC00909-202ENST00000580048 GALCP54803 685 aa11.03□□□□□ -0.64
LINC00909-202ENST00000580048 KCNH2Q12809 1159 aa11.03□□□□□ -0.64
LINC00909-202ENST00000580048 ZBTB38Q8NAP3 1195 aaPredicted RBP11.03□□□□□ -0.64
LINC00909-202ENST00000580048 SPOCK2Q92563 424 aa11.03□□□□□ -0.64
LINC00909-202ENST00000580048 DTNBP1Q96EV8 351 aa11.03□□□□□ -0.64
LINC00909-202ENST00000580048 ZNF333Q96JL9 665 aa11.03□□□□□ -0.64
LINC00909-202ENST00000580048 ZNF512BQ96KM6 892 aaPredicted RBP11.03□□□□□ -0.64
LINC00909-202ENST00000580048 TRAPPC9Q96Q05 1148 aa11.03□□□□□ -0.64
LINC00909-202ENST00000580048 VCX3BQ9H321 246 aa11.03□□□□□ -0.64
LINC00909-202ENST00000580048 VCX3AQ9NNX9 186 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms