RNA–Protein interactions for RNA: ENST00000578415.1

TSEN54-205, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 994 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-205ENST00000578415 APOL5Q9BWW9 433 aa23.76■■□□□ 1.39
TSEN54-205ENST00000578415 NAP1L2Q9ULW6 460 aaPredicted RBP23.76■■□□□ 1.39
TSEN54-205ENST00000578415 EIF4BP23588 611 aaKnown RBP23.75■■□□□ 1.39
TSEN54-205ENST00000578415 METAP2P50579 478 aaKnown RBP eCLIP23.75■■□□□ 1.39
TSEN54-205ENST00000578415 VCPP55072 806 aaKnown RBP23.75■■□□□ 1.39
TSEN54-205ENST00000578415 CLLU1OSQ5K130 101 aa23.75■■□□□ 1.39
TSEN54-205ENST00000578415 MCTP2Q6DN12 878 aa23.75■■□□□ 1.39
TSEN54-205ENST00000578415 ZNF668Q96K58 619 aaPredicted RBP23.75■■□□□ 1.39
TSEN54-205ENST00000578415 FAM167AQ96KS9 214 aa23.75■■□□□ 1.39
TSEN54-205ENST00000578415 PRRX2Q99811 253 aa23.75■■□□□ 1.39
TSEN54-205ENST00000578415 C6orf50Q9HD87 102 aa23.75■■□□□ 1.39
TSEN54-205ENST00000578415 TCEAL9Q9UHQ7 104 aa23.75■■□□□ 1.39
TSEN54-205ENST00000578415 CDH22Q9UJ99 828 aa23.75■■□□□ 1.39
TSEN54-205ENST00000578415 EDIL3O43854 480 aa23.74■■□□□ 1.39
TSEN54-205ENST00000578415 CPA1P15085 419 aa23.74■■□□□ 1.39
TSEN54-205ENST00000578415 ZSCAN20P17040 1043 aaPredicted RBP23.74■■□□□ 1.39
TSEN54-205ENST00000578415 PPM1AP35813 382 aa23.74■■□□□ 1.39
TSEN54-205ENST00000578415 KRT32Q14532 448 aa23.74■■□□□ 1.39
TSEN54-205ENST00000578415 SPG21Q9NZD8 308 aa23.74■■□□□ 1.39
TSEN54-205ENST00000578415 SAMM50Q9Y512 469 aa23.74■■□□□ 1.39
TSEN54-205ENST00000578415 CCDC196A0A1B0GTZ2 297 aa23.73■■□□□ 1.39
TSEN54-205ENST00000578415 WDR64B1ANS9 1081 aa23.73■■□□□ 1.39
TSEN54-205ENST00000578415 OATP04181 439 aa23.73■■□□□ 1.39
TSEN54-205ENST00000578415 DARSP14868 501 aaKnown RBP23.73■■□□□ 1.39
TSEN54-205ENST00000578415 HOXB8P17481 243 aaPredicted RBP23.73■■□□□ 1.39
TSEN54-205ENST00000578415 SP100P23497 879 aaPredicted RBP23.73■■□□□ 1.39
TSEN54-205ENST00000578415 TMOD1P28289 359 aa23.73■■□□□ 1.39
TSEN54-205ENST00000578415 GPC3P51654 580 aa23.73■■□□□ 1.39
TSEN54-205ENST00000578415 TMC7Q7Z402 723 aa23.73■■□□□ 1.39
TSEN54-205ENST00000578415 ABI1Q8IZP0 508 aa23.73■■□□□ 1.39
TSEN54-205ENST00000578415 CCDC12Q8WUD4 166 aaPredicted RBP23.73■■□□□ 1.39
TSEN54-205ENST00000578415 PRPF3O43395 683 aaKnown RBP23.72■■□□□ 1.39
TSEN54-205ENST00000578415 GNA11P29992 359 aa23.72■■□□□ 1.39
TSEN54-205ENST00000578415 PRKCEQ02156 737 aa23.72■■□□□ 1.39
TSEN54-205ENST00000578415 KRT17Q04695 432 aa23.72■■□□□ 1.39
TSEN54-205ENST00000578415 UGCGQ16739 394 aa23.72■■□□□ 1.39
TSEN54-205ENST00000578415 ZNF598Q86UK7 904 aaKnown RBP23.72■■□□□ 1.39
TSEN54-205ENST00000578415 SLC39A11Q8N1S5 342 aa23.72■■□□□ 1.39
TSEN54-205ENST00000578415 ZNF710Q8N1W2 664 aa23.72■■□□□ 1.39
TSEN54-205ENST00000578415 RNF169Q8NCN4 708 aa23.72■■□□□ 1.39
TSEN54-205ENST00000578415 DISC1Q9NRI5 854 aa23.72■■□□□ 1.39
TSEN54-205ENST00000578415 HCFC2Q9Y5Z7 792 aa23.72■■□□□ 1.39
TSEN54-205ENST00000578415 NID2Q14112 1375 aa23.72■■□□□ 1.39
TSEN54-205ENST00000578415 KMT2EQ8IZD2 1858 aa23.72■■□□□ 1.39
TSEN54-205ENST00000578415 A0A0U1RQF3 1178 aa23.71■■□□□ 1.39
TSEN54-205ENST00000578415 HMGB1P09429 215 aaKnown RBP23.71■■□□□ 1.39
TSEN54-205ENST00000578415 FGFR4P22455 802 aa23.71■■□□□ 1.39
TSEN54-205ENST00000578415 MRPL43Q8N983 215 aaKnown RBP23.71■■□□□ 1.39
TSEN54-205ENST00000578415 PHKBQ93100 1093 aa23.71■■□□□ 1.39
TSEN54-205ENST00000578415 CACNA1HO95180 2353 aa23.7■■□□□ 1.38
TSEN54-205ENST00000578415 C2orf71A6NGG8 1288 aa23.7■■□□□ 1.38
TSEN54-205ENST00000578415 MSH4O15457 936 aa23.7■■□□□ 1.38
TSEN54-205ENST00000578415 AVPR2P30518 371 aa23.7■■□□□ 1.38
TSEN54-205ENST00000578415 FGD1P98174 961 aa23.7■■□□□ 1.38
TSEN54-205ENST00000578415 Q6ZUG5 572 aa23.7■■□□□ 1.38
TSEN54-205ENST00000578415 HELQQ8TDG4 1101 aa23.7■■□□□ 1.38
TSEN54-205ENST00000578415 CASP10Q92851 521 aa23.7■■□□□ 1.38
TSEN54-205ENST00000578415 BRF1Q92994 677 aa23.7■■□□□ 1.38
TSEN54-205ENST00000578415 NRBP2Q9NSY0 501 aa23.7■■□□□ 1.38
TSEN54-205ENST00000578415 MYH9P35579 1960 aaKnown RBP23.69■■□□□ 1.38
TSEN54-205ENST00000578415 CSDE1O75534 798 aaKnown RBP23.69■■□□□ 1.38
TSEN54-205ENST00000578415 PDGFBP01127 241 aaPredicted RBP23.69■■□□□ 1.38
TSEN54-205ENST00000578415 DRP2Q13474 957 aa23.69■■□□□ 1.38
TSEN54-205ENST00000578415 SMC1AQ14683 1233 aaKnown RBP23.69■■□□□ 1.38
TSEN54-205ENST00000578415 NTRK3Q16288 839 aa23.69■■□□□ 1.38
TSEN54-205ENST00000578415 ADAM7Q9H2U9 754 aa23.69■■□□□ 1.38
TSEN54-205ENST00000578415 POMKQ9H5K3 350 aa23.69■■□□□ 1.38
TSEN54-205ENST00000578415 FAM86C1Q9NVL1 165 aa23.69■■□□□ 1.38
TSEN54-205ENST00000578415 CHMP2AO43633 222 aa23.68■■□□□ 1.38
TSEN54-205ENST00000578415 CLASP2O75122 1294 aaKnown RBP23.68■■□□□ 1.38
TSEN54-205ENST00000578415 EOMESO95936 686 aa23.68■■□□□ 1.38
TSEN54-205ENST00000578415 TBC1D8BQ0IIM8 1120 aa23.68■■□□□ 1.38
TSEN54-205ENST00000578415 TARBP2Q15633 366 aaKnown RBP23.68■■□□□ 1.38
TSEN54-205ENST00000578415 TPRNQ4KMQ1 711 aa23.68■■□□□ 1.38
TSEN54-205ENST00000578415 ZBTB33Q86T24 672 aa23.68■■□□□ 1.38
TSEN54-205ENST00000578415 BICD2Q8TD16 824 aa23.68■■□□□ 1.38
TSEN54-205ENST00000578415 SLC5A5Q92911 643 aa23.68■■□□□ 1.38
TSEN54-205ENST00000578415 KCNB2Q92953 911 aa23.68■■□□□ 1.38
TSEN54-205ENST00000578415 GJA10Q969M2 543 aa23.68■■□□□ 1.38
TSEN54-205ENST00000578415 CCDC136Q96JN2 1154 aa23.68■■□□□ 1.38
TSEN54-205ENST00000578415 SCLT1Q96NL6 688 aa23.68■■□□□ 1.38
TSEN54-205ENST00000578415 RIT2Q99578 217 aa23.68■■□□□ 1.38
TSEN54-205ENST00000578415 UNC45AQ9H3U1 944 aa23.68■■□□□ 1.38
TSEN54-205ENST00000578415 TSHZ2Q9NRE2 1034 aa23.68■■□□□ 1.38
TSEN54-205ENST00000578415 NR2E1Q9Y466 385 aa23.68■■□□□ 1.38
TSEN54-205ENST00000578415 USP34Q70CQ2 3546 aa23.68■■□□□ 1.38
TSEN54-205ENST00000578415 C2CD4DB7Z1M9 353 aa23.67■■□□□ 1.38
TSEN54-205ENST00000578415 NT5C1B-RDH14C9J2C7 533 aa23.67■■□□□ 1.38
TSEN54-205ENST00000578415 GAS7O60861 476 aa23.67■■□□□ 1.38
TSEN54-205ENST00000578415 BCAR1P56945 870 aa23.67■■□□□ 1.38
TSEN54-205ENST00000578415 KREMEN2Q8NCW0 462 aa23.67■■□□□ 1.38
TSEN54-205ENST00000578415 NLRP7Q8WX94 980 aa23.67■■□□□ 1.38
TSEN54-205ENST00000578415 RIPOR3Q96MK2 946 aa23.67■■□□□ 1.38
TSEN54-205ENST00000578415 DACT1Q9NYF0 836 aa23.67■■□□□ 1.38
TSEN54-205ENST00000578415 VPS54Q9P1Q0 977 aa23.67■■□□□ 1.38
TSEN54-205ENST00000578415 CDC45O75419 566 aa23.66■■□□□ 1.38
TSEN54-205ENST00000578415 SFNP31947 248 aa23.66■■□□□ 1.38
TSEN54-205ENST00000578415 JAK3P52333 1124 aa23.66■■□□□ 1.38
TSEN54-205ENST00000578415 ITIH3Q06033 890 aa23.66■■□□□ 1.38
TSEN54-205ENST00000578415 LRCH2Q5VUJ6 765 aa23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms