RNA–Protein interactions for RNA: ENST00000569440.5

BBS4-218, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 4

Gene BBS4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-218ENST00000569440 ZBP1Q9H171 429 aa7.24□□□□□ -1.25
BBS4-218ENST00000569440 ATP6V0A4Q9HBG4 840 aa7.24□□□□□ -1.25
BBS4-218ENST00000569440 LTB4R2Q9NPC1 389 aa7.24□□□□□ -1.25
BBS4-218ENST00000569440 RNF19AQ9NV58 838 aa7.24□□□□□ -1.25
BBS4-218ENST00000569440 TMEM161AQ9NX61 479 aa7.24□□□□□ -1.25
BBS4-218ENST00000569440 TUBE1Q9UJT0 475 aa7.24□□□□□ -1.25
BBS4-218ENST00000569440 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.24□□□□□ -1.25
BBS4-218ENST00000569440 GPSM3Q9Y4H4 160 aa7.24□□□□□ -1.25
BBS4-218ENST00000569440 TRPV2Q9Y5S1 764 aa7.24□□□□□ -1.25
BBS4-218ENST00000569440 ABCB11O95342 1321 aa7.24□□□□□ -1.25
BBS4-218ENST00000569440 CCDC171Q6TFL3 1326 aa7.24□□□□□ -1.25
BBS4-218ENST00000569440 KDM3AQ9Y4C1 1321 aa7.24□□□□□ -1.25
BBS4-218ENST00000569440 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.23□□□□□ -1.25
BBS4-218ENST00000569440 TSPY2A6NKD2 308 aa7.23□□□□□ -1.25
BBS4-218ENST00000569440 MAP3K7O43318 606 aa7.23□□□□□ -1.25
BBS4-218ENST00000569440 PAPLNO95428 1278 aa7.23□□□□□ -1.25
BBS4-218ENST00000569440 TOP3BO95985 862 aaKnown RBP7.23□□□□□ -1.25
BBS4-218ENST00000569440 CAPNS1P04632 268 aa7.23□□□□□ -1.25
BBS4-218ENST00000569440 SLC3A2P08195 630 aaKnown RBP7.23□□□□□ -1.25
BBS4-218ENST00000569440 SNHG28P0DPA3 235 aa7.23□□□□□ -1.25
BBS4-218ENST00000569440 CTSAP10619 480 aa7.23□□□□□ -1.25
BBS4-218ENST00000569440 MYCLP12524 364 aaPredicted RBP7.23□□□□□ -1.25
BBS4-218ENST00000569440 LAMP2P13473 410 aa7.23□□□□□ -1.25
BBS4-218ENST00000569440 TRIM27P14373 513 aa7.23□□□□□ -1.25
BBS4-218ENST00000569440 GNAT2P19087 354 aa7.23□□□□□ -1.25
BBS4-218ENST00000569440 HSD17B4P51659 736 aa7.23□□□□□ -1.25
BBS4-218ENST00000569440 CLCN4P51793 760 aa7.23□□□□□ -1.25
BBS4-218ENST00000569440 MTAPQ13126 283 aa7.23□□□□□ -1.25
BBS4-218ENST00000569440 PPFIA1Q13136 1202 aa7.23□□□□□ -1.25
BBS4-218ENST00000569440 UBXN2BQ14CS0 331 aa7.23□□□□□ -1.25
BBS4-218ENST00000569440 MLF2Q15773 248 aaPredicted RBP7.23□□□□□ -1.25
BBS4-218ENST00000569440 CCDC6Q16204 474 aa7.23□□□□□ -1.25
BBS4-218ENST00000569440 C6orf132Q5T0Z8 1188 aa7.23□□□□□ -1.25
BBS4-218ENST00000569440 UTP14CQ5TAP6 766 aaKnown RBP7.23□□□□□ -1.25
BBS4-218ENST00000569440 STPG1Q5TH74 334 aa7.23□□□□□ -1.25
BBS4-218ENST00000569440 PSAPL1Q6NUJ1 521 aa7.23□□□□□ -1.25
BBS4-218ENST00000569440 CYFIP1Q7L576 1253 aa7.23□□□□□ -1.25
BBS4-218ENST00000569440 VPS52Q8N1B4 723 aa7.23□□□□□ -1.25
BBS4-218ENST00000569440 IL31RAQ8NI17 732 aa7.23□□□□□ -1.25
BBS4-218ENST00000569440 AUTS2Q8WXX7 1259 aa7.23□□□□□ -1.25
BBS4-218ENST00000569440 STAMQ92783 540 aa7.23□□□□□ -1.25
BBS4-218ENST00000569440 CLUAP1Q96AJ1 413 aa7.23□□□□□ -1.25
BBS4-218ENST00000569440 KLHL5Q96PQ7 755 aa7.23□□□□□ -1.25
BBS4-218ENST00000569440 NELL2Q99435 816 aa7.23□□□□□ -1.25
BBS4-218ENST00000569440 TMEM47Q9BQJ4 181 aa7.23□□□□□ -1.25
BBS4-218ENST00000569440 RPP25Q9BUL9 199 aaKnown RBP7.23□□□□□ -1.25
BBS4-218ENST00000569440 CELF4Q9BZC1 486 aaKnown RBP7.23□□□□□ -1.25
BBS4-218ENST00000569440 SLC24A3Q9HC58 644 aa7.23□□□□□ -1.25
BBS4-218ENST00000569440 MRS2Q9HD23 443 aa7.23□□□□□ -1.25
BBS4-218ENST00000569440 TNNQ9UQP3 1299 aa7.23□□□□□ -1.25
BBS4-218ENST00000569440 EXOC6BQ9Y2D4 811 aa7.23□□□□□ -1.25
BBS4-218ENST00000569440 NUMBLQ9Y6R0 609 aa7.23□□□□□ -1.25
BBS4-218ENST00000569440 BPTFQ12830 3046 aa7.23□□□□□ -1.25
BBS4-218ENST00000569440 FANCMQ8IYD8 2048 aa7.23□□□□□ -1.25
BBS4-218ENST00000569440 WDFY3Q8IZQ1 3526 aa7.23□□□□□ -1.25
BBS4-218ENST00000569440 DENND3A2RUS2 1198 aa7.22□□□□□ -1.25
BBS4-218ENST00000569440 SPATA31C2B4DYI2 1134 aa7.22□□□□□ -1.25
BBS4-218ENST00000569440 OPLAHO14841 1288 aa7.22□□□□□ -1.25
BBS4-218ENST00000569440 GPAA1O43292 621 aa7.22□□□□□ -1.25
BBS4-218ENST00000569440 HRO43593 1189 aa7.22□□□□□ -1.25
BBS4-218ENST00000569440 ZNF806P0C7X5 589 aa7.22□□□□□ -1.25
BBS4-218ENST00000569440 TOP1P11387 765 aaKnown RBP7.22□□□□□ -1.25
BBS4-218ENST00000569440 IBSPP21815 317 aaPredicted RBP7.22□□□□□ -1.25
BBS4-218ENST00000569440 CD72P21854 359 aa7.22□□□□□ -1.25
BBS4-218ENST00000569440 TARSP26639 723 aaKnown RBP7.22□□□□□ -1.25
BBS4-218ENST00000569440 POLGP54098 1239 aaPredicted RBP7.22□□□□□ -1.25
BBS4-218ENST00000569440 LSM11P83369 360 aaKnown RBP eCLIP7.22□□□□□ -1.25
BBS4-218ENST00000569440 PPARAQ07869 468 aa7.22□□□□□ -1.25
BBS4-218ENST00000569440 TMEM62Q0P6H9 643 aa7.22□□□□□ -1.25
BBS4-218ENST00000569440 FOXC1Q12948 553 aa7.22□□□□□ -1.25
BBS4-218ENST00000569440 NFX1Q12986 1120 aaKnown RBP7.22□□□□□ -1.25
BBS4-218ENST00000569440 SIM2Q14190 667 aaPredicted RBP7.22□□□□□ -1.25
BBS4-218ENST00000569440 NEDD9Q14511 834 aa7.22□□□□□ -1.25
BBS4-218ENST00000569440 PGM5Q15124 567 aa7.22□□□□□ -1.25
BBS4-218ENST00000569440 TMEM266Q2M3C6 531 aa7.22□□□□□ -1.25
BBS4-218ENST00000569440 AASDHQ4L235 1098 aaPredicted RBP7.22□□□□□ -1.25
BBS4-218ENST00000569440 CLASRPQ8N2M8 674 aaKnown RBP7.22□□□□□ -1.25
BBS4-218ENST00000569440 LRRC43Q8N309 656 aa7.22□□□□□ -1.25
BBS4-218ENST00000569440 TMEM87AQ8NBN3 555 aa7.22□□□□□ -1.25
BBS4-218ENST00000569440 ZBTB10Q96DT7 871 aa7.22□□□□□ -1.25
BBS4-218ENST00000569440 SCNM1Q9BWG6 230 aa7.22□□□□□ -1.25
BBS4-218ENST00000569440 FAM49AQ9H0Q0 323 aaPredicted RBP7.22□□□□□ -1.25
BBS4-218ENST00000569440 C1orf115Q9H7X2 142 aa7.22□□□□□ -1.25
BBS4-218ENST00000569440 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.22□□□□□ -1.25
BBS4-218ENST00000569440 MRPL11Q9Y3B7 192 aaKnown RBP7.22□□□□□ -1.25
BBS4-218ENST00000569440 MYO10Q9HD67 2058 aa7.22□□□□□ -1.25
BBS4-218ENST00000569440 CLUHO75153 1309 aa7.22□□□□□ -1.25
BBS4-218ENST00000569440 PLXNA4Q9HCM2 1894 aa7.21□□□□□ -1.25
BBS4-218ENST00000569440 RRN3P2A6NIE6 340 aa7.21□□□□□ -1.26
BBS4-218ENST00000569440 SHISA7A6NL88 538 aa7.21□□□□□ -1.26
BBS4-218ENST00000569440 M0QZ92 97 aa7.21□□□□□ -1.26
BBS4-218ENST00000569440 GIPC1O14908 333 aa7.21□□□□□ -1.26
BBS4-218ENST00000569440 NCAM2O15394 837 aa7.21□□□□□ -1.26
BBS4-218ENST00000569440 HOXA2O43364 376 aa7.21□□□□□ -1.26
BBS4-218ENST00000569440 LILRB3O75022 631 aa7.21□□□□□ -1.26
BBS4-218ENST00000569440 APPP05067 770 aa7.21□□□□□ -1.26
BBS4-218ENST00000569440 IFIT2P09913 472 aaKnown RBP7.21□□□□□ -1.26
BBS4-218ENST00000569440 CA8P35219 290 aa7.21□□□□□ -1.26
BBS4-218ENST00000569440 SEMA3FQ13275 785 aa7.21□□□□□ -1.26
BBS4-218ENST00000569440 DSC3Q14574 896 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms