RNA–Protein interactions for RNA: ENST00000562404.1

LPCAT4-202, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 3

Gene LPCAT4, Length 577 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-202ENST00000562404 MARCH6O60337 910 aa12.43□□□□□ -0.42
LPCAT4-202ENST00000562404 NEMFO60524 1076 aa12.43□□□□□ -0.42
LPCAT4-202ENST00000562404 DARSP14868 501 aaKnown RBP12.43□□□□□ -0.42
LPCAT4-202ENST00000562404 EIF4BP23588 611 aaKnown RBP12.43□□□□□ -0.42
LPCAT4-202ENST00000562404 TMOD1P28289 359 aa12.43□□□□□ -0.42
LPCAT4-202ENST00000562404 MCM7P33993 719 aa12.43□□□□□ -0.42
LPCAT4-202ENST00000562404 TXKP42681 527 aa12.43□□□□□ -0.42
LPCAT4-202ENST00000562404 SARSP49591 514 aaKnown RBP12.43□□□□□ -0.42
LPCAT4-202ENST00000562404 GPM6BQ13491 265 aa12.43□□□□□ -0.42
LPCAT4-202ENST00000562404 BTG3Q14201 252 aaPredicted RBP12.43□□□□□ -0.42
LPCAT4-202ENST00000562404 ZNF174Q15697 407 aa12.43□□□□□ -0.42
LPCAT4-202ENST00000562404 C4orf19Q8IY42 314 aa12.43□□□□□ -0.42
LPCAT4-202ENST00000562404 TMX3Q96JJ7 454 aa12.43□□□□□ -0.42
LPCAT4-202ENST00000562404 TBC1D32Q96NH3 1257 aa12.43□□□□□ -0.42
LPCAT4-202ENST00000562404 HSD17B14Q9BPX1 270 aa12.43□□□□□ -0.42
LPCAT4-202ENST00000562404 EIF2AK1Q9BQI3 630 aaKnown RBP12.43□□□□□ -0.42
LPCAT4-202ENST00000562404 FDXACB1Q9BRP7 624 aaPredicted RBP12.43□□□□□ -0.42
LPCAT4-202ENST00000562404 DHX33Q9H6R0 707 aaKnown RBP12.43□□□□□ -0.42
LPCAT4-202ENST00000562404 RNF19AQ9NV58 838 aa12.43□□□□□ -0.42
LPCAT4-202ENST00000562404 THEGQ9P2T0 379 aa12.43□□□□□ -0.42
LPCAT4-202ENST00000562404 PCDHA12Q9UN75 941 aa12.43□□□□□ -0.42
LPCAT4-202ENST00000562404 DENND3A2RUS2 1198 aa12.42□□□□□ -0.42
LPCAT4-202ENST00000562404 C5orf67F2Z3F1 127 aa12.42□□□□□ -0.42
LPCAT4-202ENST00000562404 GRM6O15303 877 aa12.42□□□□□ -0.42
LPCAT4-202ENST00000562404 BAG4O95429 457 aaKnown RBP12.42□□□□□ -0.42
LPCAT4-202ENST00000562404 FGFR1P11362 822 aa12.42□□□□□ -0.42
LPCAT4-202ENST00000562404 YWHABP31946 246 aaKnown RBP12.42□□□□□ -0.42
LPCAT4-202ENST00000562404 CTNNB1P35222 781 aa12.42□□□□□ -0.42
LPCAT4-202ENST00000562404 BMPR1AP36894 532 aa12.42□□□□□ -0.42
LPCAT4-202ENST00000562404 TOB1P50616 345 aaPredicted RBP12.42□□□□□ -0.42
LPCAT4-202ENST00000562404 FAM189BP81408 668 aa12.42□□□□□ -0.42
LPCAT4-202ENST00000562404 HMGN5P82970 282 aaKnown RBP12.42□□□□□ -0.42
LPCAT4-202ENST00000562404 CAMK1Q14012 370 aa12.42□□□□□ -0.42
LPCAT4-202ENST00000562404 SLC24A5Q71RS6 500 aa12.42□□□□□ -0.42
LPCAT4-202ENST00000562404 RHPN2Q8IUC4 686 aa12.42□□□□□ -0.42
LPCAT4-202ENST00000562404 TPH2Q8IWU9 490 aa12.42□□□□□ -0.42
LPCAT4-202ENST00000562404 CMTR2Q8IYT2 770 aaKnown RBP12.42□□□□□ -0.42
LPCAT4-202ENST00000562404 NLRP7Q8WX94 980 aa12.42□□□□□ -0.42
LPCAT4-202ENST00000562404 TMEM143Q96AN5 459 aa12.42□□□□□ -0.42
LPCAT4-202ENST00000562404 CEP170P1Q96L14 293 aa12.42□□□□□ -0.42
LPCAT4-202ENST00000562404 SAMD11Q96NU1 681 aa12.42□□□□□ -0.42
LPCAT4-202ENST00000562404 FOXP1Q9H334 677 aaPredicted RBP12.42□□□□□ -0.42
LPCAT4-202ENST00000562404 XPNPEP1Q9NQW7 623 aa12.42□□□□□ -0.42
LPCAT4-202ENST00000562404 LMCD1Q9NZU5 365 aa12.42□□□□□ -0.42
LPCAT4-202ENST00000562404 SUCLA2Q9P2R7 463 aaPredicted RBP12.42□□□□□ -0.42
LPCAT4-202ENST00000562404 SPATA31C1P0DKV0 1188 aa12.41□□□□□ -0.42
LPCAT4-202ENST00000562404 ATF7P17544 494 aaPredicted RBP12.41□□□□□ -0.42
LPCAT4-202ENST00000562404 DNAJB1P25685 340 aa12.41□□□□□ -0.42
LPCAT4-202ENST00000562404 KCNQ1P51787 676 aa12.41□□□□□ -0.42
LPCAT4-202ENST00000562404 SAFBQ15424 915 aaKnown RBP eCLIP12.41□□□□□ -0.42
LPCAT4-202ENST00000562404 SKIV2LQ15477 1246 aaKnown RBP12.41□□□□□ -0.42
LPCAT4-202ENST00000562404 C4orf32Q8N8J7 132 aa12.41□□□□□ -0.42
LPCAT4-202ENST00000562404 FAM184AQ8NB25 1140 aa12.41□□□□□ -0.42
LPCAT4-202ENST00000562404 ATXN2LQ8WWM7 1075 aaKnown RBP12.41□□□□□ -0.42
LPCAT4-202ENST00000562404 MRPL38Q96DV4 380 aaKnown RBP12.41□□□□□ -0.42
LPCAT4-202ENST00000562404 ASB2Q96Q27 587 aa12.41□□□□□ -0.42
LPCAT4-202ENST00000562404 ZSWIM4Q9H7M6 989 aa12.41□□□□□ -0.42
LPCAT4-202ENST00000562404 MINDY3Q9H8M7 445 aa12.41□□□□□ -0.42
LPCAT4-202ENST00000562404 IFT122Q9HBG6 1241 aa12.41□□□□□ -0.42
LPCAT4-202ENST00000562404 ALG13Q9NP73 1137 aaKnown RBP12.41□□□□□ -0.42
LPCAT4-202ENST00000562404 PCDHB7Q9Y5E2 793 aa12.41□□□□□ -0.42
LPCAT4-202ENST00000562404 MED24O75448 989 aa12.4□□□□□ -0.42
LPCAT4-202ENST00000562404 CSPG5O95196 566 aa12.4□□□□□ -0.42
LPCAT4-202ENST00000562404 LYPLA2O95372 231 aa12.4□□□□□ -0.42
LPCAT4-202ENST00000562404 STAG3L1P0CL83 205 aa12.4□□□□□ -0.42
LPCAT4-202ENST00000562404 U2AF2P26368 475 aaKnown RBP eCLIP12.4□□□□□ -0.42
LPCAT4-202ENST00000562404 TECP42680 631 aa12.4□□□□□ -0.42
LPCAT4-202ENST00000562404 XKR9Q5GH70 373 aa12.4□□□□□ -0.42
LPCAT4-202ENST00000562404 TJAP1Q5JTD0 557 aa12.4□□□□□ -0.42
LPCAT4-202ENST00000562404 TTC38Q5R3I4 469 aa12.4□□□□□ -0.42
LPCAT4-202ENST00000562404 LRRC55Q6ZSA7 311 aa12.4□□□□□ -0.42
LPCAT4-202ENST00000562404 NOSTRINQ8IVI9 506 aa12.4□□□□□ -0.42
LPCAT4-202ENST00000562404 PIGOQ8TEQ8 1089 aa12.4□□□□□ -0.42
LPCAT4-202ENST00000562404 PRPF31Q8WWY3 499 aaKnown RBP12.4□□□□□ -0.42
LPCAT4-202ENST00000562404 NLRP4Q96MN2 994 aa12.4□□□□□ -0.42
LPCAT4-202ENST00000562404 SCLT1Q96NL6 688 aa12.4□□□□□ -0.42
LPCAT4-202ENST00000562404 C1orf112Q9NSG2 853 aa12.4□□□□□ -0.42
LPCAT4-202ENST00000562404 LRFN2Q9ULH4 789 aa12.4□□□□□ -0.42
LPCAT4-202ENST00000562404 PCDHB6Q9Y5E3 794 aa12.4□□□□□ -0.42
LPCAT4-202ENST00000562404 NCOR1O75376 2440 aa12.39□□□□□ -0.43
LPCAT4-202ENST00000562404 TBKBP1A7MCY6 615 aa12.39□□□□□ -0.43
LPCAT4-202ENST00000562404 MEIS3P2A8K0S8 358 aa12.39□□□□□ -0.43
LPCAT4-202ENST00000562404 ST18O60284 1047 aa12.39□□□□□ -0.43
LPCAT4-202ENST00000562404 DKC1O60832 514 aaKnown RBP eCLIP12.39□□□□□ -0.43
LPCAT4-202ENST00000562404 ITGB1P05556 798 aa12.39□□□□□ -0.43
LPCAT4-202ENST00000562404 RB1P06400 928 aa12.39□□□□□ -0.43
LPCAT4-202ENST00000562404 BMP1P13497 986 aa12.39□□□□□ -0.43
LPCAT4-202ENST00000562404 GJB2P29033 226 aa12.39□□□□□ -0.43
LPCAT4-202ENST00000562404 POLGP54098 1239 aaPredicted RBP12.39□□□□□ -0.43
LPCAT4-202ENST00000562404 MRPS5P82675 430 aaKnown RBP12.39□□□□□ -0.43
LPCAT4-202ENST00000562404 EMC2Q15006 297 aa12.39□□□□□ -0.43
LPCAT4-202ENST00000562404 ECM1Q16610 540 aa12.39□□□□□ -0.43
LPCAT4-202ENST00000562404 TCEAL5Q5H9L2 206 aa12.39□□□□□ -0.43
LPCAT4-202ENST00000562404 CLLU1OSQ5K130 101 aa12.39□□□□□ -0.43
LPCAT4-202ENST00000562404 ODR4Q5SWX8 454 aa12.39□□□□□ -0.43
LPCAT4-202ENST00000562404 ZNF598Q86UK7 904 aaKnown RBP12.39□□□□□ -0.43
LPCAT4-202ENST00000562404 CATSPER3Q86XQ3 398 aa12.39□□□□□ -0.43
LPCAT4-202ENST00000562404 ECHDC2Q86YB7 292 aa12.39□□□□□ -0.43
LPCAT4-202ENST00000562404 KLHL23Q8NBE8 558 aa12.39□□□□□ -0.43
LPCAT4-202ENST00000562404 CASD1Q96PB1 797 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms