RNA–Protein interactions for RNA: ENST00000557454.1

NEDD1-211, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-211ENST00000557454 MRPL11Q9Y3B7 192 aaKnown RBP10.92□□□□□ -0.66
NEDD1-211ENST00000557454 NUMBLQ9Y6R0 609 aa10.92□□□□□ -0.66
NEDD1-211ENST00000557454 C2orf16Q68DN1 1984 aa10.92□□□□□ -0.66
NEDD1-211ENST00000557454 SNHG28P0DPA3 235 aa10.91□□□□□ -0.66
NEDD1-211ENST00000557454 CCND2P30279 289 aa10.91□□□□□ -0.66
NEDD1-211ENST00000557454 SEMA3FQ13275 785 aa10.91□□□□□ -0.66
NEDD1-211ENST00000557454 NEDD9Q14511 834 aa10.91□□□□□ -0.66
NEDD1-211ENST00000557454 SF3A2Q15428 464 aaKnown RBP10.91□□□□□ -0.66
NEDD1-211ENST00000557454 HSP90AB4PQ58FF6 505 aa10.91□□□□□ -0.66
NEDD1-211ENST00000557454 TMEM173Q86WV6 379 aaPredicted RBP10.91□□□□□ -0.66
NEDD1-211ENST00000557454 LURAP1LQ8IV03 231 aa10.91□□□□□ -0.66
NEDD1-211ENST00000557454 TRMT2AQ8IZ69 625 aaKnown RBP10.91□□□□□ -0.66
NEDD1-211ENST00000557454 KIF1BPQ96EK5 621 aa10.91□□□□□ -0.66
NEDD1-211ENST00000557454 TMEM169Q96HH4 297 aa10.91□□□□□ -0.66
NEDD1-211ENST00000557454 PCDHB8Q9UN66 801 aa10.91□□□□□ -0.66
NEDD1-211ENST00000557454 NOC2LQ9Y3T9 749 aaKnown RBP10.91□□□□□ -0.66
NEDD1-211ENST00000557454 PCDHB13Q9Y5F0 798 aa10.91□□□□□ -0.66
NEDD1-211ENST00000557454 IRAK3Q9Y616 596 aa10.91□□□□□ -0.66
NEDD1-211ENST00000557454 STK24Q9Y6E0 443 aa10.91□□□□□ -0.66
NEDD1-211ENST00000557454 ANHXE9PGG2 379 aa10.9□□□□□ -0.66
NEDD1-211ENST00000557454 FOXD2O60548 495 aaPredicted RBP10.9□□□□□ -0.66
NEDD1-211ENST00000557454 RPLP2P05387 115 aaKnown RBP10.9□□□□□ -0.66
NEDD1-211ENST00000557454 CTSAP10619 480 aa10.9□□□□□ -0.66
NEDD1-211ENST00000557454 TARSP26639 723 aaKnown RBP10.9□□□□□ -0.66
NEDD1-211ENST00000557454 HOXA13P31271 388 aaPredicted RBP10.9□□□□□ -0.66
NEDD1-211ENST00000557454 TCF7P36402 384 aaPredicted RBP10.9□□□□□ -0.66
NEDD1-211ENST00000557454 CLCN4P51793 760 aa10.9□□□□□ -0.66
NEDD1-211ENST00000557454 PRKCQQ04759 706 aa10.9□□□□□ -0.66
NEDD1-211ENST00000557454 MTAPQ13126 283 aa10.9□□□□□ -0.66
NEDD1-211ENST00000557454 SIM2Q14190 667 aaPredicted RBP10.9□□□□□ -0.66
NEDD1-211ENST00000557454 QRICH1Q2TAL8 776 aa10.9□□□□□ -0.66
NEDD1-211ENST00000557454 STOX1Q6ZVD7 989 aa10.9□□□□□ -0.66
NEDD1-211ENST00000557454 GET4Q7L5D6 327 aaPredicted RBP10.9□□□□□ -0.66
NEDD1-211ENST00000557454 PPFIBP1Q86W92 1011 aa10.9□□□□□ -0.66
NEDD1-211ENST00000557454 ABI1Q8IZP0 508 aa10.9□□□□□ -0.66
NEDD1-211ENST00000557454 ADAM32Q8TC27 787 aa10.9□□□□□ -0.66
NEDD1-211ENST00000557454 TMEM40Q8WWA1 233 aa10.9□□□□□ -0.66
NEDD1-211ENST00000557454 CLDN23Q96B33 292 aa10.9□□□□□ -0.66
NEDD1-211ENST00000557454 RPP25Q9BUL9 199 aaKnown RBP10.9□□□□□ -0.66
NEDD1-211ENST00000557454 IGSF5Q9NSI5 407 aa10.9□□□□□ -0.66
NEDD1-211ENST00000557454 ANKFY1Q9P2R3 1169 aa10.9□□□□□ -0.66
NEDD1-211ENST00000557454 GINS2Q9Y248 185 aa10.9□□□□□ -0.66
NEDD1-211ENST00000557454 PCDHA1Q9Y5I3 950 aa10.9□□□□□ -0.66
NEDD1-211ENST00000557454 CELSR3Q9NYQ7 3312 aa10.9□□□□□ -0.66
NEDD1-211ENST00000557454 KDM3AQ9Y4C1 1321 aa10.89□□□□□ -0.67
NEDD1-211ENST00000557454 GIPC1O14908 333 aa10.89□□□□□ -0.67
NEDD1-211ENST00000557454 RNF113AO15541 343 aaKnown RBP10.89□□□□□ -0.67
NEDD1-211ENST00000557454 RPS6KA5O75582 802 aa10.89□□□□□ -0.67
NEDD1-211ENST00000557454 LAMP2P13473 410 aa10.89□□□□□ -0.67
NEDD1-211ENST00000557454 FAM189BP81408 668 aa10.89□□□□□ -0.67
NEDD1-211ENST00000557454 KRT76Q01546 638 aa10.89□□□□□ -0.67
NEDD1-211ENST00000557454 ZNF252P-AS1Q0IIN9 211 aa10.89□□□□□ -0.67
NEDD1-211ENST00000557454 GIT2Q14161 759 aa10.89□□□□□ -0.67
NEDD1-211ENST00000557454 GNPTABQ3T906 1256 aa10.89□□□□□ -0.67
NEDD1-211ENST00000557454 SLC44A4Q53GD3 710 aa10.89□□□□□ -0.67
NEDD1-211ENST00000557454 ZBTB41Q5SVQ8 909 aa10.89□□□□□ -0.67
NEDD1-211ENST00000557454 GPATCH4Q5T3I0 446 aaKnown RBP10.89□□□□□ -0.67
NEDD1-211ENST00000557454 STPG1Q5TH74 334 aa10.89□□□□□ -0.67
NEDD1-211ENST00000557454 PDZD3Q86UT5 571 aa10.89□□□□□ -0.67
NEDD1-211ENST00000557454 ADGRF4Q8IZF3 695 aa10.89□□□□□ -0.67
NEDD1-211ENST00000557454 CMASQ8NFW8 434 aaPredicted RBP10.89□□□□□ -0.67
NEDD1-211ENST00000557454 BBC3Q96PG8 261 aaPredicted RBP10.89□□□□□ -0.67
NEDD1-211ENST00000557454 LSM14BQ9BX40 385 aaKnown RBP10.89□□□□□ -0.67
NEDD1-211ENST00000557454 ELAC1Q9H777 363 aaKnown RBP10.89□□□□□ -0.67
NEDD1-211ENST00000557454 ST3GAL5Q9UNP4 418 aa10.89□□□□□ -0.67
NEDD1-211ENST00000557454 DOCK8Q8NF50 2099 aa10.89□□□□□ -0.67
NEDD1-211ENST00000557454 CCDC195A0A1B0GUA6 201 aa10.88□□□□□ -0.67
NEDD1-211ENST00000557454 SPATA31C2B4DYI2 1134 aa10.88□□□□□ -0.67
NEDD1-211ENST00000557454 HOXA2O43364 376 aa10.88□□□□□ -0.67
NEDD1-211ENST00000557454 MYBP10242 640 aa10.88□□□□□ -0.67
NEDD1-211ENST00000557454 INSRRP14616 1297 aa10.88□□□□□ -0.67
NEDD1-211ENST00000557454 KLRC2P26717 231 aa10.88□□□□□ -0.67
NEDD1-211ENST00000557454 RPS9P46781 194 aaKnown RBP10.88□□□□□ -0.67
NEDD1-211ENST00000557454 NOVA1P51513 510 aaKnown RBP10.88□□□□□ -0.67
NEDD1-211ENST00000557454 NRLP54845 237 aa10.88□□□□□ -0.67
NEDD1-211ENST00000557454 BCAR1P56945 870 aa10.88□□□□□ -0.67
NEDD1-211ENST00000557454 GHRHRQ02643 423 aa10.88□□□□□ -0.67
NEDD1-211ENST00000557454 SRSF5Q13243 272 aaKnown RBP10.88□□□□□ -0.67
NEDD1-211ENST00000557454 CLLU1OSQ5K130 101 aa10.88□□□□□ -0.67
NEDD1-211ENST00000557454 C19orf48Q6RUI8 117 aa10.88□□□□□ -0.67
NEDD1-211ENST00000557454 C12orf50Q8NA57 414 aaPredicted RBP10.88□□□□□ -0.67
NEDD1-211ENST00000557454 KBTBD3Q8NAB2 608 aa10.88□□□□□ -0.67
NEDD1-211ENST00000557454 TRAPPC12Q8WVT3 735 aa10.88□□□□□ -0.67
NEDD1-211ENST00000557454 KAT6AQ92794 2004 aa10.88□□□□□ -0.67
NEDD1-211ENST00000557454 FGF14Q92915 247 aa10.88□□□□□ -0.67
NEDD1-211ENST00000557454 INPP4AQ96PE3 977 aaPredicted RBP10.88□□□□□ -0.67
NEDD1-211ENST00000557454 SEC62Q99442 399 aaKnown RBP10.88□□□□□ -0.67
NEDD1-211ENST00000557454 SCNM1Q9BWG6 230 aa10.88□□□□□ -0.67
NEDD1-211ENST00000557454 CDHR5Q9HBB8 845 aa10.88□□□□□ -0.67
NEDD1-211ENST00000557454 MAN1C1Q9NR34 630 aa10.88□□□□□ -0.67
NEDD1-211ENST00000557454 TOMM22Q9NS69 142 aa10.88□□□□□ -0.67
NEDD1-211ENST00000557454 FAM217BQ9NTX9 383 aaPredicted RBP10.88□□□□□ -0.67
NEDD1-211ENST00000557454 ERAP1Q9NZ08 941 aa10.88□□□□□ -0.67
NEDD1-211ENST00000557454 LAMA4Q16363 1823 aa10.87□□□□□ -0.67
NEDD1-211ENST00000557454 EIF4E1BA6NMX2 242 aaKnown RBP10.87□□□□□ -0.67
NEDD1-211ENST00000557454 INPPL1O15357 1258 aa10.87□□□□□ -0.67
NEDD1-211ENST00000557454 FIBPO43427 364 aa10.87□□□□□ -0.67
NEDD1-211ENST00000557454 ORC4O43929 436 aa10.87□□□□□ -0.67
NEDD1-211ENST00000557454 RFPL2O75678 378 aa10.87□□□□□ -0.67
NEDD1-211ENST00000557454 ALDH7A1P49419 539 aaKnown RBP10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms