RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 LETM2Q2VYF4 491 aa6.71□□□□□ -1.34
ATXN3-245ENST00000556958 AASDHQ4L235 1098 aaPredicted RBP6.71□□□□□ -1.34
ATXN3-245ENST00000556958 MSS51Q4VC12 460 aa6.71□□□□□ -1.34
ATXN3-245ENST00000556958 ZBTB41Q5SVQ8 909 aa6.71□□□□□ -1.34
ATXN3-245ENST00000556958 SYDE2Q5VT97 1194 aa6.71□□□□□ -1.34
ATXN3-245ENST00000556958 ARHGEF16Q5VV41 709 aa6.71□□□□□ -1.34
ATXN3-245ENST00000556958 ZSCAN25Q6NSZ9 544 aa6.71□□□□□ -1.34
ATXN3-245ENST00000556958 BTNL9Q6UXG8 535 aa6.71□□□□□ -1.34
ATXN3-245ENST00000556958 C15orf39Q6ZRI6 1047 aa6.71□□□□□ -1.34
ATXN3-245ENST00000556958 MCF2L2Q86YR7 1114 aa6.71□□□□□ -1.34
ATXN3-245ENST00000556958 DCAF4Q8WV16 495 aa6.71□□□□□ -1.34
ATXN3-245ENST00000556958 RSAD2Q8WXG1 361 aa6.71□□□□□ -1.34
ATXN3-245ENST00000556958 ZCCHC14Q8WYQ9 949 aaKnown RBP6.71□□□□□ -1.34
ATXN3-245ENST00000556958 CLUAP1Q96AJ1 413 aa6.71□□□□□ -1.34
ATXN3-245ENST00000556958 ZNF558Q96NG5 402 aa6.71□□□□□ -1.34
ATXN3-245ENST00000556958 RMDN3Q96TC7 470 aa6.71□□□□□ -1.34
ATXN3-245ENST00000556958 FOXQ1Q9C009 403 aa6.71□□□□□ -1.34
ATXN3-245ENST00000556958 SFXN1Q9H9B4 322 aa6.71□□□□□ -1.34
ATXN3-245ENST00000556958 SLC2A4RGQ9NR83 387 aa6.71□□□□□ -1.34
ATXN3-245ENST00000556958 SPG21Q9NZD8 308 aa6.71□□□□□ -1.34
ATXN3-245ENST00000556958 ZNF215Q9UL58 517 aaPredicted RBP6.71□□□□□ -1.34
ATXN3-245ENST00000556958 STX8Q9UNK0 236 aa6.71□□□□□ -1.34
ATXN3-245ENST00000556958 NOP58Q9Y2X3 529 aaKnown RBP6.71□□□□□ -1.34
ATXN3-245ENST00000556958 HELZ2Q9BYK8 2649 aaKnown RBP6.71□□□□□ -1.34
ATXN3-245ENST00000556958 CACNA1FO60840 1977 aa6.71□□□□□ -1.34
ATXN3-245ENST00000556958 TANC1Q9C0D5 1861 aa6.7□□□□□ -1.34
ATXN3-245ENST00000556958 BPTFQ12830 3046 aa6.7□□□□□ -1.34
ATXN3-245ENST00000556958 M0QZ92 97 aa6.7□□□□□ -1.34
ATXN3-245ENST00000556958 TM4SF5O14894 197 aa6.7□□□□□ -1.34
ATXN3-245ENST00000556958 HOXA2O43364 376 aa6.7□□□□□ -1.34
ATXN3-245ENST00000556958 PRDM1O75626 825 aa6.7□□□□□ -1.34
ATXN3-245ENST00000556958 LGALS2P05162 132 aa6.7□□□□□ -1.34
ATXN3-245ENST00000556958 NR3C2P08235 984 aa6.7□□□□□ -1.34
ATXN3-245ENST00000556958 SLC16A2P36021 539 aa6.7□□□□□ -1.34
ATXN3-245ENST00000556958 GATMP50440 423 aa6.7□□□□□ -1.34
ATXN3-245ENST00000556958 ADAM17P78536 824 aa6.7□□□□□ -1.34
ATXN3-245ENST00000556958 SKOR1P84550 965 aa6.7□□□□□ -1.34
ATXN3-245ENST00000556958 ATP8B2P98198 1209 aa6.7□□□□□ -1.34
ATXN3-245ENST00000556958 PRKCQQ04759 706 aa6.7□□□□□ -1.34
ATXN3-245ENST00000556958 MGAT3Q09327 533 aa6.7□□□□□ -1.34
ATXN3-245ENST00000556958 UBXN2BQ14CS0 331 aa6.7□□□□□ -1.34
ATXN3-245ENST00000556958 LPAL2Q16609 132 aa6.7□□□□□ -1.34
ATXN3-245ENST00000556958 ODR4Q5SWX8 454 aa6.7□□□□□ -1.34
ATXN3-245ENST00000556958 BRICD5Q6PL45 260 aa6.7□□□□□ -1.34
ATXN3-245ENST00000556958 KCNT2Q6UVM3 1135 aa6.7□□□□□ -1.34
ATXN3-245ENST00000556958 RSPO2Q6UXX9 243 aaPredicted RBP6.7□□□□□ -1.34
ATXN3-245ENST00000556958 CYP26C1Q6V0L0 522 aa6.7□□□□□ -1.34
ATXN3-245ENST00000556958 AACSQ86V21 672 aa6.7□□□□□ -1.34
ATXN3-245ENST00000556958 ERC1Q8IUD2 1116 aa6.7□□□□□ -1.34
ATXN3-245ENST00000556958 LURAP1LQ8IV03 231 aa6.7□□□□□ -1.34
ATXN3-245ENST00000556958 C12orf50Q8NA57 414 aaPredicted RBP6.7□□□□□ -1.34
ATXN3-245ENST00000556958 MAP4K1Q92918 833 aa6.7□□□□□ -1.34
ATXN3-245ENST00000556958 TAAR1Q96RJ0 339 aa6.7□□□□□ -1.34
ATXN3-245ENST00000556958 DNAJC2Q99543 621 aaKnown RBP6.7□□□□□ -1.34
ATXN3-245ENST00000556958 AGO3Q9H9G7 860 aaKnown RBP6.7□□□□□ -1.34
ATXN3-245ENST00000556958 C1orf112Q9NSG2 853 aa6.7□□□□□ -1.34
ATXN3-245ENST00000556958 EPS15L1Q9UBC2 864 aa6.7□□□□□ -1.34
ATXN3-245ENST00000556958 CDY2AQ9Y6F7 541 aa6.7□□□□□ -1.34
ATXN3-245ENST00000556958 COL11A1P12107 1806 aaPredicted RBP6.7□□□□□ -1.34
ATXN3-245ENST00000556958 WDR19Q8NEZ3 1342 aa6.7□□□□□ -1.34
ATXN3-245ENST00000556958 CARNS1A5YM72 827 aa6.69□□□□□ -1.34
ATXN3-245ENST00000556958 LRRN2O75325 713 aa6.69□□□□□ -1.34
ATXN3-245ENST00000556958 HSPD1P10809 573 aaKnown RBP6.69□□□□□ -1.34
ATXN3-245ENST00000556958 IBSPP21815 317 aaPredicted RBP6.69□□□□□ -1.34
ATXN3-245ENST00000556958 CNR2P34972 360 aa6.69□□□□□ -1.34
ATXN3-245ENST00000556958 GUCA2AQ02747 115 aa6.69□□□□□ -1.34
ATXN3-245ENST00000556958 C19orf57Q0VDD7 668 aa6.69□□□□□ -1.34
ATXN3-245ENST00000556958 PAK2Q13177 524 aa6.69□□□□□ -1.34
ATXN3-245ENST00000556958 SIM2Q14190 667 aaPredicted RBP6.69□□□□□ -1.34
ATXN3-245ENST00000556958 KANK3Q6NY19 840 aa6.69□□□□□ -1.34
ATXN3-245ENST00000556958 ELMSAN1Q6PJG2 1045 aa6.69□□□□□ -1.34
ATXN3-245ENST00000556958 SLC24A5Q71RS6 500 aa6.69□□□□□ -1.34
ATXN3-245ENST00000556958 PDZD3Q86UT5 571 aa6.69□□□□□ -1.34
ATXN3-245ENST00000556958 GLIS3Q8NEA6 775 aa6.69□□□□□ -1.34
ATXN3-245ENST00000556958 SYTL5Q8TDW5 730 aaPredicted RBP6.69□□□□□ -1.34
ATXN3-245ENST00000556958 SSH3Q8TE77 659 aa6.69□□□□□ -1.34
ATXN3-245ENST00000556958 LMBR1Q8WVP7 490 aa6.69□□□□□ -1.34
ATXN3-245ENST00000556958 LINC01599Q8WXQ3 324 aa6.69□□□□□ -1.34
ATXN3-245ENST00000556958 ARHGAP45Q92619 1136 aa6.69□□□□□ -1.34
ATXN3-245ENST00000556958 LSM14BQ9BX40 385 aaKnown RBP6.69□□□□□ -1.34
ATXN3-245ENST00000556958 BCAS3Q9H6U6 928 aa6.69□□□□□ -1.34
ATXN3-245ENST00000556958 ATP6V0A4Q9HBG4 840 aa6.69□□□□□ -1.34
ATXN3-245ENST00000556958 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.69□□□□□ -1.34
ATXN3-245ENST00000556958 DPP7Q9UHL4 492 aa6.69□□□□□ -1.34
ATXN3-245ENST00000556958 PADI3Q9ULW8 664 aa6.69□□□□□ -1.34
ATXN3-245ENST00000556958 MTMR7Q9Y216 660 aa6.69□□□□□ -1.34
ATXN3-245ENST00000556958 MRPS17Q9Y2R5 130 aaKnown RBP6.69□□□□□ -1.34
ATXN3-245ENST00000556958 PCDHB15Q9Y5E8 787 aa6.69□□□□□ -1.34
ATXN3-245ENST00000556958 PTPRSQ13332 1948 aa6.69□□□□□ -1.34
ATXN3-245ENST00000556958 CNOT1A5YKK6 2376 aaKnown RBP6.69□□□□□ -1.34
ATXN3-245ENST00000556958 FRMPD2Q68DX3 1309 aaPredicted RBP6.69□□□□□ -1.34
ATXN3-245ENST00000556958 IGF2RP11717 2491 aa6.69□□□□□ -1.34
ATXN3-245ENST00000556958 SPEGQ15772 3267 aa6.68□□□□□ -1.34
ATXN3-245ENST00000556958 MICAL3Q7RTP6 2002 aa6.68□□□□□ -1.34
ATXN3-245ENST00000556958 DENND3A2RUS2 1198 aa6.68□□□□□ -1.34
ATXN3-245ENST00000556958 GSG1L2A8MUP6 293 aa6.68□□□□□ -1.34
ATXN3-245ENST00000556958 CAPN5O15484 640 aaPredicted RBP6.68□□□□□ -1.34
ATXN3-245ENST00000556958 EPCAMP16422 314 aa6.68□□□□□ -1.34
ATXN3-245ENST00000556958 EIF2AK2P19525 551 aaKnown RBP6.68□□□□□ -1.34
ATXN3-245ENST00000556958 RPS9P46781 194 aaKnown RBP6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 132 ms