RNA–Protein interactions for RNA: ENST00000556809.1

PABPN1-206, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 969 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-206ENST00000556809 COL4A6Q14031 1691 aa25.13■■□□□ 1.61
PABPN1-206ENST00000556809 RPS6KA5O75582 802 aa25.12■■□□□ 1.61
PABPN1-206ENST00000556809 LYPLA2O95372 231 aa25.12■■□□□ 1.61
PABPN1-206ENST00000556809 FOSL2P15408 326 aa25.12■■□□□ 1.61
PABPN1-206ENST00000556809 NPEPPSP55786 919 aa25.12■■□□□ 1.61
PABPN1-206ENST00000556809 NLRP11P59045 1033 aaKnown RBP25.12■■□□□ 1.61
PABPN1-206ENST00000556809 CEBPZQ03701 1054 aaKnown RBP25.12■■□□□ 1.61
PABPN1-206ENST00000556809 ADGRE1Q14246 886 aa25.12■■□□□ 1.61
PABPN1-206ENST00000556809 PTPAQ15257 358 aa25.12■■□□□ 1.61
PABPN1-206ENST00000556809 TPH2Q8IWU9 490 aa25.12■■□□□ 1.61
PABPN1-206ENST00000556809 ZNF396Q96N95 335 aaPredicted RBP25.12■■□□□ 1.61
PABPN1-206ENST00000556809 TSPYL2Q9H2G4 693 aaPredicted RBP25.12■■□□□ 1.61
PABPN1-206ENST00000556809 DAXXQ9UER7 740 aaPredicted RBP25.12■■□□□ 1.61
PABPN1-206ENST00000556809 LINC01553A4QN01 128 aa25.11■■□□□ 1.61
PABPN1-206ENST00000556809 VWA3AA6NCI4 1184 aa25.11■■□□□ 1.61
PABPN1-206ENST00000556809 YWHABP31946 246 aaKnown RBP25.11■■□□□ 1.61
PABPN1-206ENST00000556809 GPC3P51654 580 aa25.11■■□□□ 1.61
PABPN1-206ENST00000556809 HAUS3Q68CZ6 603 aa25.11■■□□□ 1.61
PABPN1-206ENST00000556809 FAM228AQ86W67 206 aa25.11■■□□□ 1.61
PABPN1-206ENST00000556809 TUFT1Q9NNX1 390 aa25.11■■□□□ 1.61
PABPN1-206ENST00000556809 ST3GAL5Q9UNP4 418 aa25.11■■□□□ 1.61
PABPN1-206ENST00000556809 PPME1Q9Y570 386 aa25.11■■□□□ 1.61
PABPN1-206ENST00000556809 EPOPA6NHQ4 379 aa25.1■■□□□ 1.61
PABPN1-206ENST00000556809 ZBTB39O15060 712 aa25.1■■□□□ 1.61
PABPN1-206ENST00000556809 UPP2O95045 317 aa25.1■■□□□ 1.61
PABPN1-206ENST00000556809 SPATA31C1P0DKV0 1188 aa25.1■■□□□ 1.61
PABPN1-206ENST00000556809 CATSPER3Q86XQ3 398 aa25.1■■□□□ 1.61
PABPN1-206ENST00000556809 POLR3CQ9BUI4 534 aaPredicted RBP25.1■■□□□ 1.61
PABPN1-206ENST00000556809 DHX33Q9H6R0 707 aaKnown RBP25.1■■□□□ 1.61
PABPN1-206ENST00000556809 CERS4Q9HA82 394 aa25.1■■□□□ 1.61
PABPN1-206ENST00000556809 RC3H2Q9HBD1 1191 aaKnown RBP25.1■■□□□ 1.61
PABPN1-206ENST00000556809 STK24Q9Y6E0 443 aa25.1■■□□□ 1.61
PABPN1-206ENST00000556809 MED24O75448 989 aa25.09■■□□□ 1.61
PABPN1-206ENST00000556809 RPA1P27694 616 aa25.09■■□□□ 1.61
PABPN1-206ENST00000556809 DDIT3P35638 169 aa25.09■■□□□ 1.61
PABPN1-206ENST00000556809 NASPP49321 788 aaPredicted RBP25.09■■□□□ 1.61
PABPN1-206ENST00000556809 NFX1Q12986 1120 aaKnown RBP25.09■■□□□ 1.61
PABPN1-206ENST00000556809 FOXD4L6Q3SYB3 417 aaPredicted RBP25.09■■□□□ 1.61
PABPN1-206ENST00000556809 FOXD4L3Q6VB84 417 aaPredicted RBP25.09■■□□□ 1.61
PABPN1-206ENST00000556809 CEP170P1Q96L14 293 aa25.09■■□□□ 1.61
PABPN1-206ENST00000556809 GAS2L1Q99501 681 aaPredicted RBP25.09■■□□□ 1.61
PABPN1-206ENST00000556809 PP2D1A8MPX8 630 aa25.08■■□□□ 1.61
PABPN1-206ENST00000556809 GPR182O15218 404 aa25.08■■□□□ 1.61
PABPN1-206ENST00000556809 MGEA5O60502 916 aa25.08■■□□□ 1.61
PABPN1-206ENST00000556809 EIF4BP23588 611 aaKnown RBP25.08■■□□□ 1.61
PABPN1-206ENST00000556809 ERVK-21P61565 698 aa25.08■■□□□ 1.61
PABPN1-206ENST00000556809 SLC39A14Q15043 492 aa25.08■■□□□ 1.61
PABPN1-206ENST00000556809 ODR4Q5SWX8 454 aa25.08■■□□□ 1.61
PABPN1-206ENST00000556809 OTUD6AQ7L8S5 288 aa25.08■■□□□ 1.61
PABPN1-206ENST00000556809 SNX29Q8TEQ0 813 aa25.08■■□□□ 1.61
PABPN1-206ENST00000556809 JPH2Q9BR39 696 aaPredicted RBP25.08■■□□□ 1.61
PABPN1-206ENST00000556809 TFIP11Q9UBB9 837 aaKnown RBP25.08■■□□□ 1.61
PABPN1-206ENST00000556809 MORC2Q9Y6X9 1032 aaPredicted RBP25.08■■□□□ 1.61
PABPN1-206ENST00000556809 MARCKSP29966 332 aaPredicted RBP25.07■■□□□ 1.6
PABPN1-206ENST00000556809 CCT6AP40227 531 aaKnown RBP25.07■■□□□ 1.6
PABPN1-206ENST00000556809 DNM2P50570 870 aa25.07■■□□□ 1.6
PABPN1-206ENST00000556809 CDC42EP1Q00587 391 aa25.07■■□□□ 1.6
PABPN1-206ENST00000556809 KRT79Q5XKE5 535 aa25.07■■□□□ 1.6
PABPN1-206ENST00000556809 ATL3Q6DD88 541 aa25.07■■□□□ 1.6
PABPN1-206ENST00000556809 MAFAQ8NHW3 353 aaPredicted RBP25.07■■□□□ 1.6
PABPN1-206ENST00000556809 ARNTL2Q8WYA1 636 aa25.07■■□□□ 1.6
PABPN1-206ENST00000556809 ZNF689Q96CS4 500 aaPredicted RBP25.07■■□□□ 1.6
PABPN1-206ENST00000556809 ZNF668Q96K58 619 aaPredicted RBP25.07■■□□□ 1.6
PABPN1-206ENST00000556809 AK8Q96MA6 479 aa25.07■■□□□ 1.6
PABPN1-206ENST00000556809 YME1L1Q96TA2 773 aa25.07■■□□□ 1.6
PABPN1-206ENST00000556809 SUCLA2Q9P2R7 463 aaPredicted RBP25.07■■□□□ 1.6
PABPN1-206ENST00000556809 EYSQ5T1H1 3165 aa25.07■■□□□ 1.6
PABPN1-206ENST00000556809 TRANK1O15050 2925 aa25.06■■□□□ 1.6
PABPN1-206ENST00000556809 RFXAPO00287 272 aa25.06■■□□□ 1.6
PABPN1-206ENST00000556809 DARSP14868 501 aaKnown RBP25.06■■□□□ 1.6
PABPN1-206ENST00000556809 POU3F3P20264 500 aaPredicted RBP25.06■■□□□ 1.6
PABPN1-206ENST00000556809 MUTP22033 750 aa25.06■■□□□ 1.6
PABPN1-206ENST00000556809 CDC25AP30304 524 aa25.06■■□□□ 1.6
PABPN1-206ENST00000556809 RFC5P40937 340 aa25.06■■□□□ 1.6
PABPN1-206ENST00000556809 NUCB2P80303 420 aa25.06■■□□□ 1.6
PABPN1-206ENST00000556809 DSC3Q14574 896 aa25.06■■□□□ 1.6
PABPN1-206ENST00000556809 STK38Q15208 465 aa25.06■■□□□ 1.6
PABPN1-206ENST00000556809 XKR9Q5GH70 373 aa25.06■■□□□ 1.6
PABPN1-206ENST00000556809 POTEGQ6S5H5 508 aa25.06■■□□□ 1.6
PABPN1-206ENST00000556809 EXOC8Q8IYI6 725 aa25.06■■□□□ 1.6
PABPN1-206ENST00000556809 SLC7A3Q8WY07 619 aa25.06■■□□□ 1.6
PABPN1-206ENST00000556809 TGS1Q96RS0 853 aaKnown RBP25.06■■□□□ 1.6
PABPN1-206ENST00000556809 TSHZ2Q9NRE2 1034 aa25.06■■□□□ 1.6
PABPN1-206ENST00000556809 RGS18Q9NS28 235 aa25.06■■□□□ 1.6
PABPN1-206ENST00000556809 ANKEF1Q9NU02 776 aa25.06■■□□□ 1.6
PABPN1-206ENST00000556809 FBXO2Q9UK22 296 aaPredicted RBP25.06■■□□□ 1.6
PABPN1-206ENST00000556809 COL4A4P53420 1690 aaPredicted RBP25.06■■□□□ 1.6
PABPN1-206ENST00000556809 NLRC5Q86WI3 1866 aa25.06■■□□□ 1.6
PABPN1-206ENST00000556809 LPXNO60711 386 aa25.05■■□□□ 1.6
PABPN1-206ENST00000556809 DGKIO75912 1065 aa25.05■■□□□ 1.6
PABPN1-206ENST00000556809 YEATS4O95619 227 aa25.05■■□□□ 1.6
PABPN1-206ENST00000556809 LONP1P36776 959 aaKnown RBP25.05■■□□□ 1.6
PABPN1-206ENST00000556809 POLGP54098 1239 aaPredicted RBP25.05■■□□□ 1.6
PABPN1-206ENST00000556809 GRIN1Q05586 938 aa25.05■■□□□ 1.6
PABPN1-206ENST00000556809 LINC00301Q8NCQ3 95 aa25.05■■□□□ 1.6
PABPN1-206ENST00000556809 MMTAG2Q9BU76 263 aaKnown RBP25.05■■□□□ 1.6
PABPN1-206ENST00000556809 SRPRBQ9Y5M8 271 aaKnown RBP25.05■■□□□ 1.6
PABPN1-206ENST00000556809 XRCC6P12956 609 aaKnown RBP eCLIP25.04■■□□□ 1.64e-16■■■□□ 18.2
PABPN1-206ENST00000556809 DNM1Q05193 864 aaKnown RBP25.04■■□□□ 1.6
PABPN1-206ENST00000556809 ECM1Q16610 540 aa25.04■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms