RNA–Protein interactions for RNA: ENST00000556217.5

SUPT16H-205, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 1,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-205ENST00000556217 PFKFB3Q16875 520 aaPredicted RBP17.49■□□□□ 0.39
SUPT16H-205ENST00000556217 KCNT2Q6UVM3 1135 aa17.49■□□□□ 0.39
SUPT16H-205ENST00000556217 TRMT1LQ7Z2T5 733 aaKnown RBP17.49■□□□□ 0.39
SUPT16H-205ENST00000556217 ZBTB33Q86T24 672 aa17.49■□□□□ 0.39
SUPT16H-205ENST00000556217 REXO1Q8N1G1 1221 aaKnown RBP17.49■□□□□ 0.39
SUPT16H-205ENST00000556217 CRYGNQ8WXF5 182 aa17.49■□□□□ 0.39
SUPT16H-205ENST00000556217 ASIC4Q96FT7 647 aa17.49■□□□□ 0.39
SUPT16H-205ENST00000556217 TCEANC2Q96MN5 208 aa17.49■□□□□ 0.39
SUPT16H-205ENST00000556217 CASD1Q96PB1 797 aa17.49■□□□□ 0.39
SUPT16H-205ENST00000556217 S1PR5Q9H228 398 aa17.49■□□□□ 0.39
SUPT16H-205ENST00000556217 C6orf50Q9HD87 102 aa17.49■□□□□ 0.39
SUPT16H-205ENST00000556217 NAP1L2Q9ULW6 460 aaPredicted RBP17.49■□□□□ 0.39
SUPT16H-205ENST00000556217 NR2E1Q9Y466 385 aa17.49■□□□□ 0.39
SUPT16H-205ENST00000556217 SAMM50Q9Y512 469 aa17.49■□□□□ 0.39
SUPT16H-205ENST00000556217 ESYT2A0FGR8 921 aa17.48■□□□□ 0.39
SUPT16H-205ENST00000556217 HMGB1P09429 215 aaKnown RBP17.48■□□□□ 0.39
SUPT16H-205ENST00000556217 NLRP11P59045 1033 aaKnown RBP17.48■□□□□ 0.39
SUPT16H-205ENST00000556217 KCNC3Q14003 757 aa17.48■□□□□ 0.39
SUPT16H-205ENST00000556217 TPRNQ4KMQ1 711 aa17.48■□□□□ 0.39
SUPT16H-205ENST00000556217 EFCAB12Q6NXP0 572 aa17.48■□□□□ 0.39
SUPT16H-205ENST00000556217 LLGL2Q6P1M3 1020 aa17.48■□□□□ 0.39
SUPT16H-205ENST00000556217 TMC7Q7Z402 723 aa17.48■□□□□ 0.39
SUPT16H-205ENST00000556217 ZMYND12Q9H0C1 365 aa17.48■□□□□ 0.39
SUPT16H-205ENST00000556217 SPG21Q9NZD8 308 aa17.48■□□□□ 0.39
SUPT16H-205ENST00000556217 GABBR1Q9UBS5 961 aa17.48■□□□□ 0.39
SUPT16H-205ENST00000556217 PLXNA3P51805 1871 aa17.48■□□□□ 0.39
SUPT16H-205ENST00000556217 WDR64B1ANS9 1081 aa17.47■□□□□ 0.39
SUPT16H-205ENST00000556217 EIF4BP23588 611 aaKnown RBP17.47■□□□□ 0.39
SUPT16H-205ENST00000556217 GNA11P29992 359 aa17.47■□□□□ 0.39
SUPT16H-205ENST00000556217 CDC27P30260 824 aa17.47■□□□□ 0.39
SUPT16H-205ENST00000556217 CLCN3P51790 818 aa17.47■□□□□ 0.39
SUPT16H-205ENST00000556217 SMC1AQ14683 1233 aaKnown RBP17.47■□□□□ 0.39
SUPT16H-205ENST00000556217 BMS1Q14692 1282 aaKnown RBP17.47■□□□□ 0.39
SUPT16H-205ENST00000556217 TSGA10IPQ3SY00 556 aa17.47■□□□□ 0.39
SUPT16H-205ENST00000556217 PRR16Q569H4 304 aa17.47■□□□□ 0.39
SUPT16H-205ENST00000556217 CES5AQ6NT32 575 aa17.47■□□□□ 0.39
SUPT16H-205ENST00000556217 LRRC55Q6ZSA7 311 aa17.47■□□□□ 0.39
SUPT16H-205ENST00000556217 ASCL5Q7RTU5 278 aa17.47■□□□□ 0.39
SUPT16H-205ENST00000556217 CASP10Q92851 521 aa17.47■□□□□ 0.39
SUPT16H-205ENST00000556217 SCLT1Q96NL6 688 aa17.47■□□□□ 0.39
SUPT16H-205ENST00000556217 NRBP2Q9NSY0 501 aa17.47■□□□□ 0.39
SUPT16H-205ENST00000556217 FAM217BQ9NTX9 383 aaPredicted RBP17.47■□□□□ 0.39
SUPT16H-205ENST00000556217 MYO15AQ9UKN7 3530 aa17.46■□□□□ 0.39
SUPT16H-205ENST00000556217 HIDE1A8MVS5 230 aa17.46■□□□□ 0.39
SUPT16H-205ENST00000556217 METAP2P50579 478 aaKnown RBP eCLIP17.46■□□□□ 0.39
SUPT16H-205ENST00000556217 IRX6P78412 446 aaPredicted RBP17.46■□□□□ 0.39
SUPT16H-205ENST00000556217 SYCE2Q6PIF2 218 aa17.46■□□□□ 0.39
SUPT16H-205ENST00000556217 ECHDC2Q86YB7 292 aa17.46■□□□□ 0.39
SUPT16H-205ENST00000556217 RNF169Q8NCN4 708 aa17.46■□□□□ 0.39
SUPT16H-205ENST00000556217 BICD2Q8TD16 824 aa17.46■□□□□ 0.39
SUPT16H-205ENST00000556217 NECTIN4Q96NY8 510 aa17.46■□□□□ 0.39
SUPT16H-205ENST00000556217 APOL5Q9BWW9 433 aa17.46■□□□□ 0.39
SUPT16H-205ENST00000556217 ADAMTS10Q9H324 1103 aa17.46■□□□□ 0.39
SUPT16H-205ENST00000556217 PRR23AA6NEV1 266 aa17.45■□□□□ 0.38
SUPT16H-205ENST00000556217 GALR2O43603 387 aaPredicted RBP17.45■□□□□ 0.38
SUPT16H-205ENST00000556217 EOMESO95936 686 aa17.45■□□□□ 0.38
SUPT16H-205ENST00000556217 OATP04181 439 aa17.45■□□□□ 0.38
SUPT16H-205ENST00000556217 ADD1P35611 737 aaKnown RBP17.45■□□□□ 0.38
SUPT16H-205ENST00000556217 ITIH3Q06033 890 aa17.45■□□□□ 0.38
SUPT16H-205ENST00000556217 BMP2KLQ5H9B9 411 aa17.45■□□□□ 0.38
SUPT16H-205ENST00000556217 MRPL9Q9BYD2 267 aaKnown RBP17.45■□□□□ 0.38
SUPT16H-205ENST00000556217 TSHZ2Q9NRE2 1034 aa17.45■□□□□ 0.38
SUPT16H-205ENST00000556217 RNF19AQ9NV58 838 aa17.45■□□□□ 0.38
SUPT16H-205ENST00000556217 DACT1Q9NYF0 836 aa17.45■□□□□ 0.38
SUPT16H-205ENST00000556217 GVINP1Q7Z2Y8 2422 aa17.45■□□□□ 0.38
SUPT16H-205ENST00000556217 MYO10Q9HD67 2058 aa17.44■□□□□ 0.38
SUPT16H-205ENST00000556217 WDR87Q6ZQQ6 2873 aa17.44■□□□□ 0.38
SUPT16H-205ENST00000556217 A0A0U1RQF3 1178 aa17.44■□□□□ 0.38
SUPT16H-205ENST00000556217 CARNS1A5YM72 827 aa17.44■□□□□ 0.38
SUPT16H-205ENST00000556217 DARSP14868 501 aaKnown RBP17.44■□□□□ 0.38
SUPT16H-205ENST00000556217 CIITAP33076 1130 aa17.44■□□□□ 0.38
SUPT16H-205ENST00000556217 PBX3P40426 434 aa17.44■□□□□ 0.38
SUPT16H-205ENST00000556217 ID4P47928 161 aa17.44■□□□□ 0.38
SUPT16H-205ENST00000556217 ALDH7A1P49419 539 aaKnown RBP17.44■□□□□ 0.38
SUPT16H-205ENST00000556217 CDC42EP1Q00587 391 aa17.44■□□□□ 0.38
SUPT16H-205ENST00000556217 AKAP17AQ02040 695 aaKnown RBP17.44■□□□□ 0.38
SUPT16H-205ENST00000556217 ADCK5Q3MIX3 580 aa17.44■□□□□ 0.38
SUPT16H-205ENST00000556217 UBALD2Q8IYN6 164 aa17.44■□□□□ 0.38
SUPT16H-205ENST00000556217 LRRC71Q8N4P6 559 aa17.44■□□□□ 0.38
SUPT16H-205ENST00000556217 LINC01465Q8N7H1 131 aa17.44■□□□□ 0.38
SUPT16H-205ENST00000556217 MRPL43Q8N983 215 aaKnown RBP17.44■□□□□ 0.38
SUPT16H-205ENST00000556217 RSPH1Q8WYR4 309 aa17.44■□□□□ 0.38
SUPT16H-205ENST00000556217 ADAM7Q9H2U9 754 aa17.44■□□□□ 0.38
SUPT16H-205ENST00000556217 DISC1Q9NRI5 854 aa17.44■□□□□ 0.38
SUPT16H-205ENST00000556217 VPS13AQ96RL7 3174 aa17.43■□□□□ 0.38
SUPT16H-205ENST00000556217 C2orf71A6NGG8 1288 aa17.43■□□□□ 0.38
SUPT16H-205ENST00000556217 PRPF3O43395 683 aaKnown RBP17.43■□□□□ 0.38
SUPT16H-205ENST00000556217 SP100P23497 879 aaPredicted RBP17.43■□□□□ 0.38
SUPT16H-205ENST00000556217 SFNP31947 248 aa17.43■□□□□ 0.38
SUPT16H-205ENST00000556217 CA8P35219 290 aa17.43■□□□□ 0.38
SUPT16H-205ENST00000556217 NBL1P41271 181 aa17.43■□□□□ 0.38
SUPT16H-205ENST00000556217 GPC3P51654 580 aa17.43■□□□□ 0.38
SUPT16H-205ENST00000556217 JAK3P52333 1124 aa17.43■□□□□ 0.38
SUPT16H-205ENST00000556217 PRKCEQ02156 737 aa17.43■□□□□ 0.38
SUPT16H-205ENST00000556217 TBC1D8BQ0IIM8 1120 aa17.43■□□□□ 0.38
SUPT16H-205ENST00000556217 MTMR3Q13615 1198 aa17.43■□□□□ 0.38
SUPT16H-205ENST00000556217 CLLU1OSQ5K130 101 aa17.43■□□□□ 0.38
SUPT16H-205ENST00000556217 RASEFQ8IZ41 740 aa17.43■□□□□ 0.38
SUPT16H-205ENST00000556217 SLC39A11Q8N1S5 342 aa17.43■□□□□ 0.38
SUPT16H-205ENST00000556217 TMEM87AQ8NBN3 555 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms