RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 RNF169Q8NCN4 708 aa15.79■□□□□ 0.12
PRPF39-204ENST00000553605 MAP1BP46821 2468 aaKnown RBP15.79■□□□□ 0.12
PRPF39-204ENST00000553605 LAMA4Q16363 1823 aa15.78■□□□□ 0.12
PRPF39-204ENST00000553605 POTEMA6NI47 508 aa15.78■□□□□ 0.12
PRPF39-204ENST00000553605 HBP1O60381 514 aa15.78■□□□□ 0.12
PRPF39-204ENST00000553605 N4BP1O75113 896 aaKnown RBP15.78■□□□□ 0.12
PRPF39-204ENST00000553605 POLGP54098 1239 aaPredicted RBP15.78■□□□□ 0.12
PRPF39-204ENST00000553605 LMNB2Q03252 620 aa15.78■□□□□ 0.12
PRPF39-204ENST00000553605 ANKRD45Q5TZF3 282 aa15.78■□□□□ 0.12
PRPF39-204ENST00000553605 POTEGQ6S5H5 508 aa15.78■□□□□ 0.12
PRPF39-204ENST00000553605 C15orf39Q6ZRI6 1047 aa15.78■□□□□ 0.12
PRPF39-204ENST00000553605 CYB5R4Q7L1T6 521 aa15.78■□□□□ 0.12
PRPF39-204ENST00000553605 MAML2Q8IZL2 1156 aaPredicted RBP15.78■□□□□ 0.12
PRPF39-204ENST00000553605 HELQQ8TDG4 1101 aa15.78■□□□□ 0.12
PRPF39-204ENST00000553605 GPR152Q8TDT2 470 aa15.78■□□□□ 0.12
PRPF39-204ENST00000553605 RILPL2Q969X0 211 aa15.78■□□□□ 0.12
PRPF39-204ENST00000553605 RTKNQ9BST9 563 aa15.78■□□□□ 0.12
PRPF39-204ENST00000553605 RCAN3Q9UKA8 241 aa15.78■□□□□ 0.12
PRPF39-204ENST00000553605 BAHCC1Q9P281 2608 aa15.78■□□□□ 0.12
PRPF39-204ENST00000553605 GPR32O75388 356 aa15.77■□□□□ 0.12
PRPF39-204ENST00000553605 SDSP20132 328 aa15.77■□□□□ 0.12
PRPF39-204ENST00000553605 GBP2P32456 591 aaPredicted RBP15.77■□□□□ 0.12
PRPF39-204ENST00000553605 DDX53Q86TM3 631 aaKnown RBP15.77■□□□□ 0.12
PRPF39-204ENST00000553605 SECISBP2LQ93073 1101 aaKnown RBP15.77■□□□□ 0.12
PRPF39-204ENST00000553605 NXPE3Q969Y0 559 aa15.77■□□□□ 0.12
PRPF39-204ENST00000553605 SDF4Q9BRK5 362 aa15.77■□□□□ 0.12
PRPF39-204ENST00000553605 MRPL9Q9BYD2 267 aaKnown RBP15.77■□□□□ 0.12
PRPF39-204ENST00000553605 KCNH7Q9NS40 1196 aa15.77■□□□□ 0.12
PRPF39-204ENST00000553605 PCDHB15Q9Y5E8 787 aa15.77■□□□□ 0.12
PRPF39-204ENST00000553605 GPR179Q6PRD1 2367 aa15.76■□□□□ 0.11
PRPF39-204ENST00000553605 SPTLC1O15269 473 aa15.76■□□□□ 0.11
PRPF39-204ENST00000553605 ATG7O95352 703 aa15.76■□□□□ 0.11
PRPF39-204ENST00000553605 VTNP04004 478 aa15.76■□□□□ 0.11
PRPF39-204ENST00000553605 GLULP15104 373 aa15.76■□□□□ 0.11
PRPF39-204ENST00000553605 TROAPQ12815 778 aa15.76■□□□□ 0.11
PRPF39-204ENST00000553605 PTPN14Q15678 1187 aa15.76■□□□□ 0.11
PRPF39-204ENST00000553605 ZNF528Q3MIS6 628 aa15.76■□□□□ 0.11
PRPF39-204ENST00000553605 ZNF484Q5JVG2 852 aa15.76■□□□□ 0.11
PRPF39-204ENST00000553605 TMEM173Q86WV6 379 aaPredicted RBP15.76■□□□□ 0.11
PRPF39-204ENST00000553605 RRP36Q96EU6 259 aaKnown RBP15.76■□□□□ 0.11
PRPF39-204ENST00000553605 DSCC1Q9BVC3 393 aa15.76■□□□□ 0.11
PRPF39-204ENST00000553605 PSTPIP2Q9H939 334 aa15.76■□□□□ 0.11
PRPF39-204ENST00000553605 ARHGEF3Q9NR81 526 aa15.76■□□□□ 0.11
PRPF39-204ENST00000553605 COL1A2P08123 1366 aa15.75■□□□□ 0.11
PRPF39-204ENST00000553605 NFASCO94856 1347 aa15.75■□□□□ 0.11
PRPF39-204ENST00000553605 ZC3H11AO75152 810 aaKnown RBP eCLIP15.75■□□□□ 0.11
PRPF39-204ENST00000553605 KLRC2P26717 231 aa15.75■□□□□ 0.11
PRPF39-204ENST00000553605 CLCN4P51793 760 aa15.75■□□□□ 0.11
PRPF39-204ENST00000553605 DCLRE1AQ6PJP8 1040 aa15.75■□□□□ 0.11
PRPF39-204ENST00000553605 CWC27Q6UX04 472 aaKnown RBP15.75■□□□□ 0.11
PRPF39-204ENST00000553605 PJA1Q8NG27 643 aa15.75■□□□□ 0.11
PRPF39-204ENST00000553605 STAMQ92783 540 aa15.75■□□□□ 0.11
PRPF39-204ENST00000553605 IGSF21Q96ID5 467 aa15.75■□□□□ 0.11
PRPF39-204ENST00000553605 KLHL5Q96PQ7 755 aa15.75■□□□□ 0.11
PRPF39-204ENST00000553605 EMILIN2Q9BXX0 1053 aa15.75■□□□□ 0.11
PRPF39-204ENST00000553605 FOXQ1Q9C009 403 aa15.75■□□□□ 0.11
PRPF39-204ENST00000553605 SENP2Q9HC62 589 aa15.75■□□□□ 0.11
PRPF39-204ENST00000553605 EPS15L1Q9UBC2 864 aa15.75■□□□□ 0.11
PRPF39-204ENST00000553605 RALYQ9UKM9 306 aaKnown RBP15.75■□□□□ 0.11
PRPF39-204ENST00000553605 CACNA1IQ9P0X4 2223 aa15.75■□□□□ 0.11
PRPF39-204ENST00000553605 IGKV6D-21A0A0A0MT36 114 aa15.74■□□□□ 0.11
PRPF39-204ENST00000553605 A0A0U1RQF3 1178 aa15.74■□□□□ 0.11
PRPF39-204ENST00000553605 CARNS1A5YM72 827 aa15.74■□□□□ 0.11
PRPF39-204ENST00000553605 SPDYE3A6NKU9 549 aa15.74■□□□□ 0.11
PRPF39-204ENST00000553605 ZBTB42B2RXF5 422 aa15.74■□□□□ 0.11
PRPF39-204ENST00000553605 BACH1O14867 736 aa15.74■□□□□ 0.11
PRPF39-204ENST00000553605 IFIT3O14879 490 aaKnown RBP15.74■□□□□ 0.11
PRPF39-204ENST00000553605 LRRN2O75325 713 aa15.74■□□□□ 0.11
PRPF39-204ENST00000553605 COL9A2Q14055 689 aaPredicted RBP15.74■□□□□ 0.11
PRPF39-204ENST00000553605 ZNF598Q86UK7 904 aaKnown RBP15.74■□□□□ 0.11
PRPF39-204ENST00000553605 METTL13Q8N6R0 699 aa15.74■□□□□ 0.11
PRPF39-204ENST00000553605 ATRIPQ8WXE1 791 aa15.74■□□□□ 0.11
PRPF39-204ENST00000553605 MXRA8Q9BRK3 442 aa15.74■□□□□ 0.11
PRPF39-204ENST00000553605 WDR6Q9NNW5 1121 aaKnown RBP15.74■□□□□ 0.11
PRPF39-204ENST00000553605 SEC63Q9UGP8 760 aaKnown RBP15.74■□□□□ 0.11
PRPF39-204ENST00000553605 FBXO4Q9UKT5 387 aa15.74■□□□□ 0.11
PRPF39-204ENST00000553605 USP18Q9UMW8 372 aa15.74■□□□□ 0.11
PRPF39-204ENST00000553605 PCDHA6Q9UN73 950 aa15.74■□□□□ 0.11
PRPF39-204ENST00000553605 PCDHA8Q9Y5H6 950 aa15.74■□□□□ 0.11
PRPF39-204ENST00000553605 C2orf16Q68DN1 1984 aa15.74■□□□□ 0.11
PRPF39-204ENST00000553605 EVPLQ92817 2033 aa15.73■□□□□ 0.11
PRPF39-204ENST00000553605 USP24Q9UPU5 2620 aa15.73■□□□□ 0.11
PRPF39-204ENST00000553605 CHD8Q9HCK8 2581 aa15.73■□□□□ 0.11
PRPF39-204ENST00000553605 ERICH2A1L162 156 aa15.73■□□□□ 0.11
PRPF39-204ENST00000553605 LAMTOR5O43504 91 aa15.73■□□□□ 0.11
PRPF39-204ENST00000553605 C22orf31O95567 290 aa15.73■□□□□ 0.11
PRPF39-204ENST00000553605 CNPP09543 421 aaKnown RBP15.73■□□□□ 0.11
PRPF39-204ENST00000553605 STARD6P59095 220 aa15.73■□□□□ 0.11
PRPF39-204ENST00000553605 UBE2SQ16763 222 aa15.73■□□□□ 0.11
PRPF39-204ENST00000553605 FAM160B1Q5W0V3 765 aa15.73■□□□□ 0.11
PRPF39-204ENST00000553605 CMASQ8NFW8 434 aaPredicted RBP15.73■□□□□ 0.11
PRPF39-204ENST00000553605 BCL7CQ8WUZ0 217 aaPredicted RBP15.73■□□□□ 0.11
PRPF39-204ENST00000553605 MYADMQ96S97 322 aa15.73■□□□□ 0.11
PRPF39-204ENST00000553605 SPATA6Q9NWH7 488 aaPredicted RBP15.73■□□□□ 0.11
PRPF39-204ENST00000553605 PCDHGA2Q9Y5H1 932 aa15.73■□□□□ 0.11
PRPF39-204ENST00000553605 CCDC195A0A1B0GUA6 201 aa15.72■□□□□ 0.11
PRPF39-204ENST00000553605 GALTP07902 379 aa15.72■□□□□ 0.11
PRPF39-204ENST00000553605 TGM1P22735 817 aa15.72■□□□□ 0.11
PRPF39-204ENST00000553605 EIF4BP23588 611 aaKnown RBP15.72■□□□□ 0.11
PRPF39-204ENST00000553605 NLRP11P59045 1033 aaKnown RBP15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms