RNA–Protein interactions for RNA: ENST00000549883.5

HDAC7-229, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-229ENST00000549883 C9IYK1 514 aa10.95□□□□□ -0.66
HDAC7-229ENST00000549883 MED24O75448 989 aa10.95□□□□□ -0.66
HDAC7-229ENST00000549883 RPLP2P05387 115 aaKnown RBP10.95□□□□□ -0.66
HDAC7-229ENST00000549883 OR52Z1P0C646 297 aa10.95□□□□□ -0.66
HDAC7-229ENST00000549883 DARSP14868 501 aaKnown RBP10.95□□□□□ -0.66
HDAC7-229ENST00000549883 TECP42680 631 aa10.95□□□□□ -0.66
HDAC7-229ENST00000549883 IL17AQ16552 155 aa10.95□□□□□ -0.66
HDAC7-229ENST00000549883 PAN2Q504Q3 1202 aaKnown RBP10.95□□□□□ -0.66
HDAC7-229ENST00000549883 XKR9Q5GH70 373 aa10.95□□□□□ -0.66
HDAC7-229ENST00000549883 RHPN2Q8IUC4 686 aa10.95□□□□□ -0.66
HDAC7-229ENST00000549883 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.95□□□□□ -0.66
HDAC7-229ENST00000549883 PIGOQ8TEQ8 1089 aa10.95□□□□□ -0.66
HDAC7-229ENST00000549883 ZNF689Q96CS4 500 aaPredicted RBP10.95□□□□□ -0.66
HDAC7-229ENST00000549883 FDXACB1Q9BRP7 624 aaPredicted RBP10.95□□□□□ -0.66
HDAC7-229ENST00000549883 DHX33Q9H6R0 707 aaKnown RBP10.95□□□□□ -0.66
HDAC7-229ENST00000549883 ZSWIM4Q9H7M6 989 aa10.95□□□□□ -0.66
HDAC7-229ENST00000549883 XPNPEP1Q9NQW7 623 aa10.95□□□□□ -0.66
HDAC7-229ENST00000549883 MRPL42Q9Y6G3 142 aaKnown RBP10.95□□□□□ -0.66
HDAC7-229ENST00000549883 TCF20Q9UGU0 1960 aaKnown RBP10.95□□□□□ -0.66
HDAC7-229ENST00000549883 PLXNA4Q9HCM2 1894 aa10.95□□□□□ -0.66
HDAC7-229ENST00000549883 TRANK1O15050 2925 aa10.95□□□□□ -0.66
HDAC7-229ENST00000549883 ADGRA3Q8IWK6 1321 aa10.94□□□□□ -0.66
HDAC7-229ENST00000549883 GPR182O15218 404 aa10.94□□□□□ -0.66
HDAC7-229ENST00000549883 FGFR1P11362 822 aa10.94□□□□□ -0.66
HDAC7-229ENST00000549883 EIF4BP23588 611 aaKnown RBP10.94□□□□□ -0.66
HDAC7-229ENST00000549883 TMOD1P28289 359 aa10.94□□□□□ -0.66
HDAC7-229ENST00000549883 GNL2Q13823 731 aaKnown RBP10.94□□□□□ -0.66
HDAC7-229ENST00000549883 EMC2Q15006 297 aa10.94□□□□□ -0.66
HDAC7-229ENST00000549883 ECM1Q16610 540 aa10.94□□□□□ -0.66
HDAC7-229ENST00000549883 EPC2Q52LR7 807 aa10.94□□□□□ -0.66
HDAC7-229ENST00000549883 FAM102BQ5T8I3 360 aa10.94□□□□□ -0.66
HDAC7-229ENST00000549883 MCTP1Q6DN14 999 aa10.94□□□□□ -0.66
HDAC7-229ENST00000549883 CATSPER3Q86XQ3 398 aa10.94□□□□□ -0.66
HDAC7-229ENST00000549883 NPAS4Q8IUM7 802 aa10.94□□□□□ -0.66
HDAC7-229ENST00000549883 TMEM192Q8IY95 271 aa10.94□□□□□ -0.66
HDAC7-229ENST00000549883 FBXO22Q8NEZ5 403 aa10.94□□□□□ -0.66
HDAC7-229ENST00000549883 PRPF31Q8WWY3 499 aaKnown RBP10.94□□□□□ -0.66
HDAC7-229ENST00000549883 NLRP7Q8WX94 980 aa10.94□□□□□ -0.66
HDAC7-229ENST00000549883 NLRP4Q96MN2 994 aa10.94□□□□□ -0.66
HDAC7-229ENST00000549883 SCLT1Q96NL6 688 aa10.94□□□□□ -0.66
HDAC7-229ENST00000549883 FTHL17Q9BXU8 183 aa10.94□□□□□ -0.66
HDAC7-229ENST00000549883 IFT122Q9HBG6 1241 aa10.94□□□□□ -0.66
HDAC7-229ENST00000549883 RGS18Q9NS28 235 aa10.94□□□□□ -0.66
HDAC7-229ENST00000549883 RNF19AQ9NV58 838 aa10.94□□□□□ -0.66
HDAC7-229ENST00000549883 DENND3A2RUS2 1198 aa10.93□□□□□ -0.66
HDAC7-229ENST00000549883 PP2D1A8MPX8 630 aa10.93□□□□□ -0.66
HDAC7-229ENST00000549883 CSPG5O95196 566 aa10.93□□□□□ -0.66
HDAC7-229ENST00000549883 POU3F3P20264 500 aaPredicted RBP10.93□□□□□ -0.66
HDAC7-229ENST00000549883 SARSP49591 514 aaKnown RBP10.93□□□□□ -0.66
HDAC7-229ENST00000549883 POLGP54098 1239 aaPredicted RBP10.93□□□□□ -0.66
HDAC7-229ENST00000549883 FAM189BP81408 668 aa10.93□□□□□ -0.66
HDAC7-229ENST00000549883 PTGDRQ13258 359 aa10.93□□□□□ -0.66
HDAC7-229ENST00000549883 CUL4AQ13619 759 aa10.93□□□□□ -0.66
HDAC7-229ENST00000549883 BTG3Q14201 252 aaPredicted RBP10.93□□□□□ -0.66
HDAC7-229ENST00000549883 POTEGQ6S5H5 508 aa10.93□□□□□ -0.66
HDAC7-229ENST00000549883 FIBCD1Q8N539 461 aa10.93□□□□□ -0.66
HDAC7-229ENST00000549883 MINDY3Q9H8M7 445 aa10.93□□□□□ -0.66
HDAC7-229ENST00000549883 SMC3Q9UQE7 1217 aa10.93□□□□□ -0.66
HDAC7-229ENST00000549883 GRM6O15303 877 aa10.92□□□□□ -0.66
HDAC7-229ENST00000549883 LYPLA2O95372 231 aa10.92□□□□□ -0.66
HDAC7-229ENST00000549883 SRGAP2CP0DJJ0 459 aa10.92□□□□□ -0.66
HDAC7-229ENST00000549883 ATF7P17544 494 aaPredicted RBP10.92□□□□□ -0.66
HDAC7-229ENST00000549883 CDC25AP30304 524 aa10.92□□□□□ -0.66
HDAC7-229ENST00000549883 CTNNB1P35222 781 aa10.92□□□□□ -0.66
HDAC7-229ENST00000549883 MCM2P49736 904 aa10.92□□□□□ -0.66
HDAC7-229ENST00000549883 RARRES1P49788 294 aa10.92□□□□□ -0.66
HDAC7-229ENST00000549883 TFF2Q03403 129 aa10.92□□□□□ -0.66
HDAC7-229ENST00000549883 LAMTOR4Q0VGL1 99 aa10.92□□□□□ -0.66
HDAC7-229ENST00000549883 GPM6BQ13491 265 aa10.92□□□□□ -0.66
HDAC7-229ENST00000549883 LONRF3Q496Y0 759 aa10.92□□□□□ -0.66
HDAC7-229ENST00000549883 SLC24A5Q71RS6 500 aa10.92□□□□□ -0.66
HDAC7-229ENST00000549883 MAEAQ7L5Y9 396 aa10.92□□□□□ -0.66
HDAC7-229ENST00000549883 OTUD6AQ7L8S5 288 aa10.92□□□□□ -0.66
HDAC7-229ENST00000549883 FERMT3Q86UX7 667 aa10.92□□□□□ -0.66
HDAC7-229ENST00000549883 ASAP3Q8TDY4 903 aa10.92□□□□□ -0.66
HDAC7-229ENST00000549883 GCOM2Q9BZD3 368 aaPredicted RBP10.92□□□□□ -0.66
HDAC7-229ENST00000549883 POLD4Q9HCU8 107 aa10.92□□□□□ -0.66
HDAC7-229ENST00000549883 GPRC5CQ9NQ84 441 aa10.92□□□□□ -0.66
HDAC7-229ENST00000549883 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.92□□□□□ -0.66
HDAC7-229ENST00000549883 FOXD4L1Q9NU39 408 aa10.92□□□□□ -0.66
HDAC7-229ENST00000549883 LRFN2Q9ULH4 789 aa10.92□□□□□ -0.66
HDAC7-229ENST00000549883 NOL7Q9UMY1 257 aaKnown RBP10.92□□□□□ -0.66
HDAC7-229ENST00000549883 PCDHB7Q9Y5E2 793 aa10.92□□□□□ -0.66
HDAC7-229ENST00000549883 COL4A3BPQ9Y5P4 624 aa10.92□□□□□ -0.66
HDAC7-229ENST00000549883 TBKBP1A7MCY6 615 aa10.91□□□□□ -0.66
HDAC7-229ENST00000549883 MEIS3P2A8K0S8 358 aa10.91□□□□□ -0.66
HDAC7-229ENST00000549883 H3BNC9 293 aa10.91□□□□□ -0.66
HDAC7-229ENST00000549883 USO1O60763 962 aaKnown RBP10.91□□□□□ -0.66
HDAC7-229ENST00000549883 DKC1O60832 514 aaKnown RBP eCLIP10.91□□□□□ -0.66
HDAC7-229ENST00000549883 STAG3L1P0CL83 205 aa10.91□□□□□ -0.66
HDAC7-229ENST00000549883 DNAJB1P25685 340 aa10.91□□□□□ -0.66
HDAC7-229ENST00000549883 BMPR1AP36894 532 aa10.91□□□□□ -0.66
HDAC7-229ENST00000549883 RFC5P40937 340 aa10.91□□□□□ -0.66
HDAC7-229ENST00000549883 TRAPPC10P48553 1259 aa10.91□□□□□ -0.66
HDAC7-229ENST00000549883 DNM2P50570 870 aa10.91□□□□□ -0.66
HDAC7-229ENST00000549883 CLLU1OSQ5K130 101 aa10.91□□□□□ -0.66
HDAC7-229ENST00000549883 LARP1BQ659C4 914 aaKnown RBP10.91□□□□□ -0.66
HDAC7-229ENST00000549883 LRRC55Q6ZSA7 311 aa10.91□□□□□ -0.66
HDAC7-229ENST00000549883 ECHDC2Q86YB7 292 aa10.91□□□□□ -0.66
HDAC7-229ENST00000549883 RNF169Q8NCN4 708 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms