RNA–Protein interactions for RNA: ENST00000548420.1

PTCH1-217, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-217ENST00000548420 GPR20Q99678 358 aa16.05■□□□□ 0.16
PTCH1-217ENST00000548420 USP26Q9BXU7 913 aa16.05■□□□□ 0.16
PTCH1-217ENST00000548420 MTF2Q9Y483 593 aaPredicted RBP16.05■□□□□ 0.16
PTCH1-217ENST00000548420 RALGAPA1Q6GYQ0 2036 aa16.04■□□□□ 0.16
PTCH1-217ENST00000548420 NRCAMQ92823 1304 aa16.04■□□□□ 0.16
PTCH1-217ENST00000548420 SH2B2O14492 632 aaPredicted RBP16.04■□□□□ 0.16
PTCH1-217ENST00000548420 MYCLP12524 364 aaPredicted RBP16.04■□□□□ 0.16
PTCH1-217ENST00000548420 MRPS6P82932 125 aaKnown RBP16.04■□□□□ 0.16
PTCH1-217ENST00000548420 SMC1AQ14683 1233 aaKnown RBP16.04■□□□□ 0.16
PTCH1-217ENST00000548420 SOWAHCQ53LP3 525 aaPredicted RBP16.04■□□□□ 0.16
PTCH1-217ENST00000548420 TAF2Q6P1X5 1199 aa16.04■□□□□ 0.16
PTCH1-217ENST00000548420 RIOX1Q9H6W3 641 aa16.04■□□□□ 0.16
PTCH1-217ENST00000548420 DZANK1Q9NVP4 752 aa16.04■□□□□ 0.16
PTCH1-217ENST00000548420 GMEB2Q9UKD1 530 aa16.04■□□□□ 0.16
PTCH1-217ENST00000548420 PCDHB7Q9Y5E2 793 aa16.04■□□□□ 0.16
PTCH1-217ENST00000548420 FGFR1P11362 822 aa16.03■□□□□ 0.16
PTCH1-217ENST00000548420 LAG3P18627 525 aa16.03■□□□□ 0.16
PTCH1-217ENST00000548420 HSPA4P34932 840 aa16.03■□□□□ 0.16
PTCH1-217ENST00000548420 STARD6P59095 220 aa16.03■□□□□ 0.16
PTCH1-217ENST00000548420 CDC37Q16543 378 aaPredicted RBP16.03■□□□□ 0.16
PTCH1-217ENST00000548420 QRICH1Q2TAL8 776 aa16.03■□□□□ 0.16
PTCH1-217ENST00000548420 ADCK5Q3MIX3 580 aa16.03■□□□□ 0.16
PTCH1-217ENST00000548420 UTP14CQ5TAP6 766 aaKnown RBP16.03■□□□□ 0.16
PTCH1-217ENST00000548420 DCLRE1AQ6PJP8 1040 aa16.03■□□□□ 0.16
PTCH1-217ENST00000548420 KCNT2Q6UVM3 1135 aa16.03■□□□□ 0.16
PTCH1-217ENST00000548420 CATIPQ7Z7H3 387 aa16.03■□□□□ 0.16
PTCH1-217ENST00000548420 AUTS2Q8WXX7 1259 aa16.03■□□□□ 0.16
PTCH1-217ENST00000548420 PDCD2LQ9BRP1 358 aa16.03■□□□□ 0.16
PTCH1-217ENST00000548420 SEMA4GQ9NTN9 838 aa16.03■□□□□ 0.16
PTCH1-217ENST00000548420 MBLAC1A4D2B0 266 aaPredicted RBP16.02■□□□□ 0.16
PTCH1-217ENST00000548420 CYTH3O43739 400 aa16.02■□□□□ 0.16
PTCH1-217ENST00000548420 REC8O95072 547 aa16.02■□□□□ 0.16
PTCH1-217ENST00000548420 KRT32Q14532 448 aa16.02■□□□□ 0.16
PTCH1-217ENST00000548420 TMEM266Q2M3C6 531 aa16.02■□□□□ 0.16
PTCH1-217ENST00000548420 LETM2Q2VYF4 491 aa16.02■□□□□ 0.16
PTCH1-217ENST00000548420 KCNV1Q6PIU1 500 aa16.02■□□□□ 0.16
PTCH1-217ENST00000548420 PRR23CQ6ZRP0 262 aa16.02■□□□□ 0.16
PTCH1-217ENST00000548420 DHX32Q7L7V1 743 aaKnown RBP16.02■□□□□ 0.16
PTCH1-217ENST00000548420 VSIG10LQ86VR7 867 aa16.02■□□□□ 0.16
PTCH1-217ENST00000548420 SGMS1Q86VZ5 419 aa16.02■□□□□ 0.16
PTCH1-217ENST00000548420 ZNF654Q8IZM8 581 aa16.02■□□□□ 0.16
PTCH1-217ENST00000548420 ST13P5Q8NFI4 369 aaPredicted RBP16.02■□□□□ 0.16
PTCH1-217ENST00000548420 SQORQ9Y6N5 450 aa16.02■□□□□ 0.16
PTCH1-217ENST00000548420 IGSF10Q6WRI0 2623 aa16.02■□□□□ 0.15
PTCH1-217ENST00000548420 OPLAHO14841 1288 aa16.01■□□□□ 0.15
PTCH1-217ENST00000548420 DDAH1O94760 285 aa16.01■□□□□ 0.15
PTCH1-217ENST00000548420 CXCL14O95715 111 aa16.01■□□□□ 0.15
PTCH1-217ENST00000548420 SMARCA1P28370 1054 aa16.01■□□□□ 0.15
PTCH1-217ENST00000548420 TMEM62Q0P6H9 643 aa16.01■□□□□ 0.15
PTCH1-217ENST00000548420 PTPN14Q15678 1187 aa16.01■□□□□ 0.15
PTCH1-217ENST00000548420 RSPH3Q86UC2 560 aa16.01■□□□□ 0.15
PTCH1-217ENST00000548420 MYADMQ96S97 322 aa16.01■□□□□ 0.15
PTCH1-217ENST00000548420 VAT1LQ9HCJ6 419 aa16.01■□□□□ 0.15
PTCH1-217ENST00000548420 RNF19AQ9NV58 838 aa16.01■□□□□ 0.15
PTCH1-217ENST00000548420 ABCB11O95342 1321 aa16■□□□□ 0.15
PTCH1-217ENST00000548420 IGSF9BQ9UPX0 1349 aa16■□□□□ 0.15
PTCH1-217ENST00000548420 C9IYK1 514 aa16■□□□□ 0.15
PTCH1-217ENST00000548420 ZBTB5O15062 677 aa16■□□□□ 0.15
PTCH1-217ENST00000548420 PPP1R11O60927 126 aaPredicted RBP16■□□□□ 0.15
PTCH1-217ENST00000548420 HMGB1P09429 215 aaKnown RBP16■□□□□ 0.15
PTCH1-217ENST00000548420 TGFB3P10600 412 aa16■□□□□ 0.15
PTCH1-217ENST00000548420 GHRHRQ02643 423 aa16■□□□□ 0.15
PTCH1-217ENST00000548420 PAK2Q13177 524 aa16■□□□□ 0.15
PTCH1-217ENST00000548420 TUBE1Q9UJT0 475 aa16■□□□□ 0.15
PTCH1-217ENST00000548420 WASF3Q9UPY6 502 aa16■□□□□ 0.15
PTCH1-217ENST00000548420 SNX14Q9Y5W7 946 aa16■□□□□ 0.15
PTCH1-217ENST00000548420 NOP56O00567 594 aaKnown RBP15.99■□□□□ 0.15
PTCH1-217ENST00000548420 SPINK2P20155 84 aa15.99■□□□□ 0.15
PTCH1-217ENST00000548420 KRT17Q04695 432 aa15.99■□□□□ 0.15
PTCH1-217ENST00000548420 SEMA3FQ13275 785 aa15.99■□□□□ 0.15
PTCH1-217ENST00000548420 PGM5Q15124 567 aa15.99■□□□□ 0.15
PTCH1-217ENST00000548420 GRIK4Q16099 956 aa15.99■□□□□ 0.15
PTCH1-217ENST00000548420 CYFIP1Q7L576 1253 aa15.99■□□□□ 0.15
PTCH1-217ENST00000548420 CABP7Q86V35 215 aa15.99■□□□□ 0.15
PTCH1-217ENST00000548420 SLC39A11Q8N1S5 342 aa15.99■□□□□ 0.15
PTCH1-217ENST00000548420 FBXL16Q8N461 479 aa15.99■□□□□ 0.15
PTCH1-217ENST00000548420 DDX1Q92499 740 aaKnown RBP15.99■□□□□ 0.15
PTCH1-217ENST00000548420 CASD1Q96PB1 797 aa15.99■□□□□ 0.15
PTCH1-217ENST00000548420 DDX23Q9BUQ8 820 aaKnown RBP15.99■□□□□ 0.15
PTCH1-217ENST00000548420 SPZ1Q9BXG8 430 aa15.99■□□□□ 0.15
PTCH1-217ENST00000548420 AMNQ9BXJ7 453 aa15.99■□□□□ 0.15
PTCH1-217ENST00000548420 LRRC2Q9BYS8 371 aa15.99■□□□□ 0.15
PTCH1-217ENST00000548420 BCO2Q9BYV7 579 aa15.99■□□□□ 0.15
PTCH1-217ENST00000548420 FAM49AQ9H0Q0 323 aaPredicted RBP15.99■□□□□ 0.15
PTCH1-217ENST00000548420 SLC2A4RGQ9NR83 387 aa15.99■□□□□ 0.15
PTCH1-217ENST00000548420 SPG21Q9NZD8 308 aa15.99■□□□□ 0.15
PTCH1-217ENST00000548420 EPS15L1Q9UBC2 864 aa15.99■□□□□ 0.15
PTCH1-217ENST00000548420 MRPL11Q9Y3B7 192 aaKnown RBP15.99■□□□□ 0.15
PTCH1-217ENST00000548420 PNMA6FA0A0J9YX94 578 aa15.98■□□□□ 0.15
PTCH1-217ENST00000548420 CCDC69A6NI79 296 aa15.98■□□□□ 0.15
PTCH1-217ENST00000548420 RETP07949 1114 aa15.98■□□□□ 0.15
PTCH1-217ENST00000548420 CALM1P0DP23 149 aa15.98■□□□□ 0.15
PTCH1-217ENST00000548420 CALM2P0DP24 149 aa15.98■□□□□ 0.15
PTCH1-217ENST00000548420 CALM3P0DP25 149 aa15.98■□□□□ 0.15
PTCH1-217ENST00000548420 KIF5BP33176 963 aa15.98■□□□□ 0.15
PTCH1-217ENST00000548420 PPFIA1Q13136 1202 aa15.98■□□□□ 0.15
PTCH1-217ENST00000548420 CSRP2Q16527 193 aa15.98■□□□□ 0.15
PTCH1-217ENST00000548420 LAIR1Q6GTX8 287 aa15.98■□□□□ 0.15
PTCH1-217ENST00000548420 MCF2L2Q86YR7 1114 aa15.98■□□□□ 0.15
PTCH1-217ENST00000548420 SAMD3Q8N6K7 520 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms