RNA–Protein interactions for RNA: ENST00000546102.1

CUL3-215, Transcript of cullin 3, humanhuman

TSL 4

Gene CUL3, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-215ENST00000546102 PTPRUQ92729 1446 aa4.3□□□□□ -1.72
CUL3-215ENST00000546102 CHD2O14647 1828 aaKnown RBP4.3□□□□□ -1.72
CUL3-215ENST00000546102 AKAP12Q02952 1782 aa4.3□□□□□ -1.72
CUL3-215ENST00000546102 INSRP06213 1382 aa4.3□□□□□ -1.72
CUL3-215ENST00000546102 FMN2Q9NZ56 1722 aa4.3□□□□□ -1.72
CUL3-215ENST00000546102 SIPA1L2Q9P2F8 1722 aaPredicted RBP4.3□□□□□ -1.72
CUL3-215ENST00000546102 ANO9A1A5B4 782 aa4.3□□□□□ -1.72
CUL3-215ENST00000546102 PTPDC1A2A3K4 754 aa4.3□□□□□ -1.72
CUL3-215ENST00000546102 RFXAPO00287 272 aa4.3□□□□□ -1.72
CUL3-215ENST00000546102 ERC2O15083 957 aa4.3□□□□□ -1.72
CUL3-215ENST00000546102 PMM2O15305 246 aa4.3□□□□□ -1.72
CUL3-215ENST00000546102 MEFVO15553 781 aaPredicted RBP4.3□□□□□ -1.72
CUL3-215ENST00000546102 PCDHGA12O60330 932 aa4.3□□□□□ -1.72
CUL3-215ENST00000546102 CFBP00751 764 aa4.3□□□□□ -1.72
CUL3-215ENST00000546102 CD3EP07766 207 aa4.3□□□□□ -1.72
CUL3-215ENST00000546102 PHKG2P15735 406 aa4.3□□□□□ -1.72
CUL3-215ENST00000546102 BMP7P18075 431 aa4.3□□□□□ -1.72
CUL3-215ENST00000546102 TPP2P29144 1249 aaPredicted RBP4.3□□□□□ -1.72
CUL3-215ENST00000546102 HTR3AP46098 478 aa4.3□□□□□ -1.72
CUL3-215ENST00000546102 TRAPPC10P48553 1259 aa4.3□□□□□ -1.72
CUL3-215ENST00000546102 DNM2P50570 870 aa4.3□□□□□ -1.72
CUL3-215ENST00000546102 SESN3P58005 492 aa4.3□□□□□ -1.72
CUL3-215ENST00000546102 HTRA3P83110 453 aa4.3□□□□□ -1.72
CUL3-215ENST00000546102 RBM10P98175 930 aaKnown RBP4.3□□□□□ -1.72
CUL3-215ENST00000546102 POU4F1Q01851 419 aa4.3□□□□□ -1.72
CUL3-215ENST00000546102 PAK1Q13153 545 aa4.3□□□□□ -1.72
CUL3-215ENST00000546102 GTF2H3Q13889 308 aa4.3□□□□□ -1.72
CUL3-215ENST00000546102 RAPGEF1Q13905 1077 aa4.3□□□□□ -1.72
CUL3-215ENST00000546102 CNGB1Q14028 1251 aaPredicted RBP4.3□□□□□ -1.72
CUL3-215ENST00000546102 DDB1Q16531 1140 aa4.3□□□□□ -1.72
CUL3-215ENST00000546102 ZNF385BQ569K4 471 aa4.3□□□□□ -1.72
CUL3-215ENST00000546102 CC2D1BQ5T0F9 858 aaKnown RBP4.3□□□□□ -1.72
CUL3-215ENST00000546102 FAM83BQ5T0W9 1011 aa4.3□□□□□ -1.72
CUL3-215ENST00000546102 ERAP2Q6P179 960 aa4.3□□□□□ -1.72
CUL3-215ENST00000546102 TMC3Q7Z5M5 1100 aa4.3□□□□□ -1.72
CUL3-215ENST00000546102 IRF2BP1Q8IU81 584 aa4.3□□□□□ -1.72
CUL3-215ENST00000546102 CISD2Q8N5K1 135 aaKnown RBP4.3□□□□□ -1.72
CUL3-215ENST00000546102 PDZD8Q8NEN9 1154 aa4.3□□□□□ -1.72
CUL3-215ENST00000546102 MYRIPQ8NFW9 859 aa4.3□□□□□ -1.72
CUL3-215ENST00000546102 PCDH19Q8TAB3 1148 aa4.3□□□□□ -1.72
CUL3-215ENST00000546102 NPLOC4Q8TAT6 608 aa4.3□□□□□ -1.72
CUL3-215ENST00000546102 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.3□□□□□ -1.72
CUL3-215ENST00000546102 PARD3BQ8TEW8 1205 aa4.3□□□□□ -1.72
CUL3-215ENST00000546102 FRS2Q8WU20 508 aa4.3□□□□□ -1.72
CUL3-215ENST00000546102 ZFYVE21Q9BQ24 234 aa4.3□□□□□ -1.72
CUL3-215ENST00000546102 ALG1Q9BT22 464 aa4.3□□□□□ -1.72
CUL3-215ENST00000546102 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.3□□□□□ -1.72
CUL3-215ENST00000546102 CELF4Q9BZC1 486 aaKnown RBP4.3□□□□□ -1.72
CUL3-215ENST00000546102 SLC12A5Q9H2X9 1139 aa4.3□□□□□ -1.72
CUL3-215ENST00000546102 KCNK12Q9HB15 430 aa4.3□□□□□ -1.72
CUL3-215ENST00000546102 GPATCH2Q9NW75 528 aa4.3□□□□□ -1.72
CUL3-215ENST00000546102 DUSP13Q9UII6 198 aa4.3□□□□□ -1.72
CUL3-215ENST00000546102 KCNH3Q9ULD8 1083 aa4.3□□□□□ -1.72
CUL3-215ENST00000546102 CNOT6Q9ULM6 557 aaKnown RBP4.3□□□□□ -1.72
CUL3-215ENST00000546102 PCDHGA9Q9Y5G4 932 aaKnown RBP4.3□□□□□ -1.72
CUL3-215ENST00000546102 PCDHGA8Q9Y5G5 932 aa4.3□□□□□ -1.72
CUL3-215ENST00000546102 PCDHGA7Q9Y5G6 932 aa4.3□□□□□ -1.72
CUL3-215ENST00000546102 PCDHGA6Q9Y5G7 932 aa4.3□□□□□ -1.72
CUL3-215ENST00000546102 PCDHGA3Q9Y5H0 932 aa4.3□□□□□ -1.72
CUL3-215ENST00000546102 PCDHGA2Q9Y5H1 932 aa4.3□□□□□ -1.72
CUL3-215ENST00000546102 MRFAP1Q9Y605 127 aa4.3□□□□□ -1.72
CUL3-215ENST00000546102 LMTK3Q96Q04 1460 aa4.3□□□□□ -1.72
CUL3-215ENST00000546102 ADGRL3Q9HAR2 1447 aa4.29□□□□□ -1.72
CUL3-215ENST00000546102 CCDC66A2RUB6 948 aa4.29□□□□□ -1.72
CUL3-215ENST00000546102 FITM1A5D6W6 292 aa4.29□□□□□ -1.72
CUL3-215ENST00000546102 ARNTLO00327 626 aa4.29□□□□□ -1.72
CUL3-215ENST00000546102 TBX3O15119 743 aa4.29□□□□□ -1.72
CUL3-215ENST00000546102 SEMA7AO75326 666 aa4.29□□□□□ -1.72
CUL3-215ENST00000546102 H2AFYO75367 372 aaKnown RBP4.29□□□□□ -1.72
CUL3-215ENST00000546102 TCEA3O75764 348 aa4.29□□□□□ -1.72
CUL3-215ENST00000546102 KRT37O76014 449 aa4.29□□□□□ -1.72
CUL3-215ENST00000546102 ESR1P03372 595 aa4.29□□□□□ -1.72
CUL3-215ENST00000546102 MYL3P08590 195 aa4.29□□□□□ -1.72
CUL3-215ENST00000546102 LCP1P13796 627 aa4.29□□□□□ -1.72
CUL3-215ENST00000546102 HSPA6P17066 643 aa4.29□□□□□ -1.72
CUL3-215ENST00000546102 HOXA5P20719 270 aa4.29□□□□□ -1.72
CUL3-215ENST00000546102 MECP2P51608 486 aaKnown RBP4.29□□□□□ -1.72
CUL3-215ENST00000546102 SCAND1P57086 179 aa4.29□□□□□ -1.72
CUL3-215ENST00000546102 ERVFC1P60507 584 aa4.29□□□□□ -1.72
CUL3-215ENST00000546102 POU5F1BQ06416 359 aa4.29□□□□□ -1.72
CUL3-215ENST00000546102 LRRC32Q14392 662 aa4.29□□□□□ -1.72
CUL3-215ENST00000546102 CLUL1Q15846 466 aa4.29□□□□□ -1.72
CUL3-215ENST00000546102 IFIT1BQ5T764 474 aaKnown RBP4.29□□□□□ -1.72
CUL3-215ENST00000546102 GPR158Q5T848 1215 aa4.29□□□□□ -1.72
CUL3-215ENST00000546102 BROXQ5VW32 411 aa4.29□□□□□ -1.72
CUL3-215ENST00000546102 TCERG1LQ5VWI1 586 aa4.29□□□□□ -1.72
CUL3-215ENST00000546102 ERICH6BQ5W0A0 696 aa4.29□□□□□ -1.72
CUL3-215ENST00000546102 ANO1Q5XXA6 986 aa4.29□□□□□ -1.72
CUL3-215ENST00000546102 RSPO2Q6UXX9 243 aaPredicted RBP4.29□□□□□ -1.72
CUL3-215ENST00000546102 LBX2Q6XYB7 198 aa4.29□□□□□ -1.72
CUL3-215ENST00000546102 WAPLQ7Z5K2 1190 aa4.29□□□□□ -1.72
CUL3-215ENST00000546102 ZNF605Q86T29 641 aa4.29□□□□□ -1.72
CUL3-215ENST00000546102 SPPL2CQ8IUH8 684 aa4.29□□□□□ -1.72
CUL3-215ENST00000546102 TMEM151BQ8IW70 566 aa4.29□□□□□ -1.72
CUL3-215ENST00000546102 CMIPQ8IY22 773 aa4.29□□□□□ -1.72
CUL3-215ENST00000546102 PAF1Q8N7H5 531 aa4.29□□□□□ -1.72
CUL3-215ENST00000546102 COPS5Q92905 334 aa4.29□□□□□ -1.72
CUL3-215ENST00000546102 TTC17Q96AE7 1141 aa4.29□□□□□ -1.72
CUL3-215ENST00000546102 AIFM3Q96NN9 605 aa4.29□□□□□ -1.72
CUL3-215ENST00000546102 CDK19Q9BWU1 502 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms