RNA–Protein interactions for RNA: ENST00000546102.1

CUL3-215, Transcript of cullin 3, humanhuman

TSL 4

Gene CUL3, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-215ENST00000546102 AEBP2Q6ZN18 517 aaPredicted RBP17.08■□□□□ 0.32
CUL3-215ENST00000546102 CHIC1Q5VXU3 224 aa16.26■□□□□ 0.19
CUL3-215ENST00000546102 SENP3Q9H4L4 574 aaPredicted RBP14.73□□□□□ -0.05
CUL3-215ENST00000546102 PHF23Q9BUL5 403 aaPredicted RBP14.48□□□□□ -0.09
CUL3-215ENST00000546102 FOXD1Q16676 465 aa13.64□□□□□ -0.23
CUL3-215ENST00000546102 PLPPR3Q6T4P5 718 aa13.04□□□□□ -0.32
CUL3-215ENST00000546102 MSH5O43196 834 aa12.91□□□□□ -0.34
CUL3-215ENST00000546102 PIAS4Q8N2W9 510 aaPredicted RBP12.82□□□□□ -0.36
CUL3-215ENST00000546102 ADRA2BP18089 450 aa12.67□□□□□ -0.38
CUL3-215ENST00000546102 PPP6R1Q9UPN7 881 aa12.66□□□□□ -0.38
CUL3-215ENST00000546102 POTEDQ86YR6 584 aa12.58□□□□□ -0.4
CUL3-215ENST00000546102 SCAF1Q9H7N4 1312 aaKnown RBP11.76□□□□□ -0.53
CUL3-215ENST00000546102 MAPK8IP2Q13387 824 aaPredicted RBP11.63□□□□□ -0.55
CUL3-215ENST00000546102 DMRT2Q9Y5R5 561 aa11.62□□□□□ -0.55
CUL3-215ENST00000546102 PPP4R3CPQ6ZMV5 832 aa11.38□□□□□ -0.59
CUL3-215ENST00000546102 DCAF8L1A6NGE4 600 aa11.26□□□□□ -0.61
CUL3-215ENST00000546102 CNKSR2Q8WXI2 1034 aa11.21□□□□□ -0.61
CUL3-215ENST00000546102 HOXD11P31277 338 aaPredicted RBP11.16□□□□□ -0.62
CUL3-215ENST00000546102 CACNB1Q02641 598 aaPredicted RBP11.11□□□□□ -0.63
CUL3-215ENST00000546102 RNF216Q9NWF9 866 aaPredicted RBP11.11□□□□□ -0.63
CUL3-215ENST00000546102 NCBP3Q53F19 620 aaKnown RBP11.03□□□□□ -0.64
CUL3-215ENST00000546102 RNF39Q9H2S5 420 aa10.92□□□□□ -0.66
CUL3-215ENST00000546102 C1QBPQ07021 282 aaKnown RBP10.82□□□□□ -0.68
CUL3-215ENST00000546102 DNAJC5BQ9UF47 199 aa10.82□□□□□ -0.68
CUL3-215ENST00000546102 NPM3O75607 178 aaKnown RBP10.74□□□□□ -0.69
CUL3-215ENST00000546102 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.74□□□□□ -0.698e-7■■□□□ 12.5
CUL3-215ENST00000546102 KCNA4P22459 653 aa10.48□□□□□ -0.73
CUL3-215ENST00000546102 U3KPZ7 1027 aaPredicted RBP10.4□□□□□ -0.74
CUL3-215ENST00000546102 CAPN15O75808 1086 aa10.36□□□□□ -0.75
CUL3-215ENST00000546102 APLP2Q06481 763 aa10.3□□□□□ -0.76
CUL3-215ENST00000546102 SPINK5Q9NQ38 1064 aaPredicted RBP10.26□□□□□ -0.77
CUL3-215ENST00000546102 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.24□□□□□ -0.77
CUL3-215ENST00000546102 HNRNPUL2Q1KMD3 747 aaKnown RBP10.24□□□□□ -0.77
CUL3-215ENST00000546102 SLC4A2P04920 1241 aa10.22□□□□□ -0.77
CUL3-215ENST00000546102 DSG3P32926 999 aa10.21□□□□□ -0.77
CUL3-215ENST00000546102 TRHP20396 242 aaPredicted RBP10.17□□□□□ -0.78
CUL3-215ENST00000546102 ZNF219Q9P2Y4 722 aaPredicted RBP10.17□□□□□ -0.78
CUL3-215ENST00000546102 SAMD1Q6SPF0 538 aaPredicted RBP10.14□□□□□ -0.79
CUL3-215ENST00000546102 ABCB7O75027 752 aa10.06□□□□□ -0.8
CUL3-215ENST00000546102 MYCNP04198 464 aaPredicted RBP10.01□□□□□ -0.81
CUL3-215ENST00000546102 SLC4A1APQ9BWU0 796 aaKnown RBP9.95□□□□□ -0.82
CUL3-215ENST00000546102 POTEHQ6S545 545 aa9.9□□□□□ -0.82
CUL3-215ENST00000546102 RBM42Q9BTD8 480 aaKnown RBP9.87□□□□□ -0.83
CUL3-215ENST00000546102 FOXD4L1Q9NU39 408 aa9.86□□□□□ -0.83
CUL3-215ENST00000546102 POLA2Q14181 598 aa9.85□□□□□ -0.83
CUL3-215ENST00000546102 ZBTB12Q9Y330 459 aaPredicted RBP9.72□□□□□ -0.85
CUL3-215ENST00000546102 ATF5Q9Y2D1 282 aaPredicted RBP9.66□□□□□ -0.86
CUL3-215ENST00000546102 CHRDL2Q6WN34 429 aa9.6□□□□□ -0.87
CUL3-215ENST00000546102 AKT1S1Q96B36 256 aa9.58□□□□□ -0.88
CUL3-215ENST00000546102 ATXN8OSP0DMR3 200 aa9.57□□□□□ -0.88
CUL3-215ENST00000546102 ZBTB22O15209 634 aa9.55□□□□□ -0.88
CUL3-215ENST00000546102 OSCARQ8IYS5 282 aa9.51□□□□□ -0.89
CUL3-215ENST00000546102 FBLN2P98095 1184 aa9.47□□□□□ -0.89
CUL3-215ENST00000546102 REM2Q8IYK8 340 aaPredicted RBP9.44□□□□□ -0.9
CUL3-215ENST00000546102 SPDYE2BA6NHP3 402 aa9.36□□□□□ -0.91
CUL3-215ENST00000546102 SPDYE6P0CI01 402 aa9.36□□□□□ -0.91
CUL3-215ENST00000546102 SPDYE2Q495Y8 402 aa9.36□□□□□ -0.91
CUL3-215ENST00000546102 PITPNM1O00562 1244 aa9.34□□□□□ -0.91
CUL3-215ENST00000546102 PIP4P2Q8N4L2 257 aa9.32□□□□□ -0.92
CUL3-215ENST00000546102 FXR2P51116 673 aaKnown RBP eCLIP9.26□□□□□ -0.93
CUL3-215ENST00000546102 SP7Q8TDD2 431 aaPredicted RBP9.26□□□□□ -0.93
CUL3-215ENST00000546102 ZNF692Q9BU19 519 aaPredicted RBP9.26□□□□□ -0.93
CUL3-215ENST00000546102 HAX1O00165 279 aa9.25□□□□□ -0.93
CUL3-215ENST00000546102 CLEC11AQ9Y240 323 aa9.25□□□□□ -0.93
CUL3-215ENST00000546102 SPDYE1Q8NFV5 336 aaPredicted RBP9.24□□□□□ -0.93
CUL3-215ENST00000546102 MKRN4PQ13434 485 aaPredicted RBP9.21□□□□□ -0.94
CUL3-215ENST00000546102 SSUH2Q9Y2M2 353 aa9.17□□□□□ -0.94
CUL3-215ENST00000546102 PRKAR2AP13861 404 aaKnown RBP9.14□□□□□ -0.95
CUL3-215ENST00000546102 CSRNP3Q8WYN3 585 aa9.12□□□□□ -0.95
CUL3-215ENST00000546102 PABPN1Q86U42 306 aaKnown RBP eCLIP9.1□□□□□ -0.95
CUL3-215ENST00000546102 PRR29P0C7W0 189 aa9.08□□□□□ -0.96
CUL3-215ENST00000546102 EHMT2Q96KQ7 1210 aa9.06□□□□□ -0.96
CUL3-215ENST00000546102 CHADLQ6NUI6 762 aa8.99□□□□□ -0.97
CUL3-215ENST00000546102 EVX2Q03828 476 aa8.97□□□□□ -0.97
CUL3-215ENST00000546102 C19orf67A6NJJ6 358 aa8.96□□□□□ -0.98
CUL3-215ENST00000546102 STAG3Q9UJ98 1225 aa8.9□□□□□ -0.98
CUL3-215ENST00000546102 FARP1Q9Y4F1 1045 aaPredicted RBP8.87□□□□□ -0.99
CUL3-215ENST00000546102 SPDYE4A6NLX3 237 aa8.86□□□□□ -0.99
CUL3-215ENST00000546102 GABBR2O75899 941 aa8.86□□□□□ -0.99
CUL3-215ENST00000546102 CD44P16070 742 aaKnown RBP8.86□□□□□ -0.99
CUL3-215ENST00000546102 CLCN6P51797 869 aa8.81□□□□□ -1
CUL3-215ENST00000546102 PAK3O75914 559 aaPredicted RBP8.75□□□□□ -1.01
CUL3-215ENST00000546102 CREBZFQ9NS37 354 aa8.74□□□□□ -1.01
CUL3-215ENST00000546102 ZRANB1Q9UGI0 708 aa8.73□□□□□ -1.01
CUL3-215ENST00000546102 NPM1P06748 294 aaKnown RBP eCLIP8.71□□□□□ -1.02
CUL3-215ENST00000546102 DCBLD2Q96PD2 775 aa8.71□□□□□ -1.02
CUL3-215ENST00000546102 LHX8Q68G74 356 aa8.69□□□□□ -1.02
CUL3-215ENST00000546102 ZNF579Q8NAF0 562 aaKnown RBP8.68□□□□□ -1.02
CUL3-215ENST00000546102 PLEKHG5O94827 1062 aa8.61□□□□□ -1.03
CUL3-215ENST00000546102 POTEIP0CG38 1075 aa8.59□□□□□ -1.03
CUL3-215ENST00000546102 GALR2O43603 387 aaPredicted RBP8.56□□□□□ -1.04
CUL3-215ENST00000546102 PHF12Q96QT6 1004 aa8.55□□□□□ -1.04
CUL3-215ENST00000546102 MNX1P50219 401 aaPredicted RBP8.53□□□□□ -1.04
CUL3-215ENST00000546102 PROM2Q8N271 834 aa8.53□□□□□ -1.04
CUL3-215ENST00000546102 MIER1Q8N108 512 aa8.5□□□□□ -1.05
CUL3-215ENST00000546102 TSPYL2Q9H2G4 693 aaPredicted RBP8.49□□□□□ -1.05
CUL3-215ENST00000546102 PLCD3Q8N3E9 789 aa8.45□□□□□ -1.06
CUL3-215ENST00000546102 MS4A3Q96HJ5 214 aa8.44□□□□□ -1.06
CUL3-215ENST00000546102 ZBTB47Q9UFB7 747 aaPredicted RBP8.43□□□□□ -1.06
CUL3-215ENST00000546102 SLC39A7Q92504 469 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms