RNA–Protein interactions for RNA: ENST00000542933.5

LINC01089-209, Transcript of long intergenic non-protein coding RNA 1089, humanhuman

TSL 3 BASIC

Gene LINC01089, Length 1,220 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01089-209ENST00000542933 KIAA1024Q9UPX6 916 aa17.21■□□□□ 0.35
LINC01089-209ENST00000542933 ARHGEF35A5YM69 484 aa17.2■□□□□ 0.34
LINC01089-209ENST00000542933 SLC26A4O43511 780 aa17.2■□□□□ 0.34
LINC01089-209ENST00000542933 USO1O60763 962 aaKnown RBP17.2■□□□□ 0.34
LINC01089-209ENST00000542933 RPS6KA5O75582 802 aa17.2■□□□□ 0.34
LINC01089-209ENST00000542933 NASPP49321 788 aaPredicted RBP17.2■□□□□ 0.34
LINC01089-209ENST00000542933 CEBPZQ03701 1054 aaKnown RBP17.2■□□□□ 0.34
LINC01089-209ENST00000542933 ECM1Q16610 540 aa17.2■□□□□ 0.34
LINC01089-209ENST00000542933 HYIQ5T013 277 aa17.2■□□□□ 0.34
LINC01089-209ENST00000542933 FOXD4L5Q5VV16 416 aaPredicted RBP17.2■□□□□ 0.34
LINC01089-209ENST00000542933 RHPN2Q8IUC4 686 aa17.2■□□□□ 0.34
LINC01089-209ENST00000542933 NLRP7Q8WX94 980 aa17.2■□□□□ 0.34
LINC01089-209ENST00000542933 FOXD4L4Q8WXT5 416 aaPredicted RBP17.2■□□□□ 0.34
LINC01089-209ENST00000542933 TMEM143Q96AN5 459 aa17.2■□□□□ 0.34
LINC01089-209ENST00000542933 COL4A3BPQ9Y5P4 624 aa17.2■□□□□ 0.34
LINC01089-209ENST00000542933 CHD7Q9P2D1 2997 aa17.19■□□□□ 0.34
LINC01089-209ENST00000542933 A0A087WWV3 80 aa17.19■□□□□ 0.34
LINC01089-209ENST00000542933 GPR182O15218 404 aa17.19■□□□□ 0.34
LINC01089-209ENST00000542933 AMHP03971 560 aa17.19■□□□□ 0.34
LINC01089-209ENST00000542933 DARSP14868 501 aaKnown RBP17.19■□□□□ 0.34
LINC01089-209ENST00000542933 EIF4BP23588 611 aaKnown RBP17.19■□□□□ 0.34
LINC01089-209ENST00000542933 DNAJB2P25686 324 aa17.19■□□□□ 0.34
LINC01089-209ENST00000542933 DEFB103AP81534 67 aa17.19■□□□□ 0.34
LINC01089-209ENST00000542933 SLC39A14Q15043 492 aa17.19■□□□□ 0.34
LINC01089-209ENST00000542933 RAB30Q15771 203 aa17.19■□□□□ 0.34
LINC01089-209ENST00000542933 CABP7Q86V35 215 aa17.19■□□□□ 0.34
LINC01089-209ENST00000542933 FAM228AQ86W67 206 aa17.19■□□□□ 0.34
LINC01089-209ENST00000542933 MCPH1Q8NEM0 835 aa17.19■□□□□ 0.34
LINC01089-209ENST00000542933 PRPF31Q8WWY3 499 aaKnown RBP17.19■□□□□ 0.34
LINC01089-209ENST00000542933 CDK5RAP3Q96JB5 506 aa17.19■□□□□ 0.34
LINC01089-209ENST00000542933 GCOM2Q9BZD3 368 aaPredicted RBP17.19■□□□□ 0.34
LINC01089-209ENST00000542933 ERVK-5Q9HDB9 667 aa17.19■□□□□ 0.34
LINC01089-209ENST00000542933 FBXO2Q9UK22 296 aaPredicted RBP17.19■□□□□ 0.34
LINC01089-209ENST00000542933 DNM3Q9UQ16 869 aa17.19■□□□□ 0.34
LINC01089-209ENST00000542933 NOC2LQ9Y3T9 749 aaKnown RBP17.19■□□□□ 0.34
LINC01089-209ENST00000542933 SRPRBQ9Y5M8 271 aaKnown RBP17.19■□□□□ 0.34
LINC01089-209ENST00000542933 GRXCR1A8MXD5 290 aa17.18■□□□□ 0.34
LINC01089-209ENST00000542933 ASAP2O43150 1006 aa17.18■□□□□ 0.34
LINC01089-209ENST00000542933 YEATS4O95619 227 aa17.18■□□□□ 0.34
LINC01089-209ENST00000542933 EYA4O95677 639 aa17.18■□□□□ 0.34
LINC01089-209ENST00000542933 BRD1O95696 1058 aa17.18■□□□□ 0.34
LINC01089-209ENST00000542933 MARCKSP29966 332 aaPredicted RBP17.18■□□□□ 0.34
LINC01089-209ENST00000542933 UBA7P41226 1012 aa17.18■□□□□ 0.34
LINC01089-209ENST00000542933 GRIN1Q05586 938 aa17.18■□□□□ 0.34
LINC01089-209ENST00000542933 NFX1Q12986 1120 aaKnown RBP17.18■□□□□ 0.34
LINC01089-209ENST00000542933 MXD4Q14582 209 aaPredicted RBP17.18■□□□□ 0.34
LINC01089-209ENST00000542933 ATL3Q6DD88 541 aa17.18■□□□□ 0.34
LINC01089-209ENST00000542933 PADI6Q6TGC4 694 aa17.18■□□□□ 0.34
LINC01089-209ENST00000542933 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.18■□□□□ 0.34
LINC01089-209ENST00000542933 HERC6Q8IVU3 1022 aa17.18■□□□□ 0.34
LINC01089-209ENST00000542933 ZNF668Q96K58 619 aaPredicted RBP17.18■□□□□ 0.34
LINC01089-209ENST00000542933 NLRP4Q96MN2 994 aa17.18■□□□□ 0.34
LINC01089-209ENST00000542933 PBX4Q9BYU1 374 aa17.18■□□□□ 0.34
LINC01089-209ENST00000542933 INO80BQ9C086 356 aaPredicted RBP17.18■□□□□ 0.34
LINC01089-209ENST00000542933 BHMT2Q9H2M3 363 aa17.18■□□□□ 0.34
LINC01089-209ENST00000542933 ST3GAL5Q9UNP4 418 aa17.18■□□□□ 0.34
LINC01089-209ENST00000542933 TMEM265A0A087WTH1 108 aa17.17■□□□□ 0.34
LINC01089-209ENST00000542933 A0A087WZ62 844 aa17.17■□□□□ 0.34
LINC01089-209ENST00000542933 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.17■□□□□ 0.34
LINC01089-209ENST00000542933 RBAK-RBAKDNI3L0D1 243 aa17.17■□□□□ 0.34
LINC01089-209ENST00000542933 TTC3P53804 2025 aa17.17■□□□□ 0.34
LINC01089-209ENST00000542933 LAMTOR4Q0VGL1 99 aa17.17■□□□□ 0.34
LINC01089-209ENST00000542933 STK38Q15208 465 aa17.17■□□□□ 0.34
LINC01089-209ENST00000542933 ZRSR1Q15695 479 aaKnown RBP17.17■□□□□ 0.34
LINC01089-209ENST00000542933 TMEM119Q4V9L6 283 aa17.17■□□□□ 0.34
LINC01089-209ENST00000542933 KSR1Q8IVT5 923 aa17.17■□□□□ 0.34
LINC01089-209ENST00000542933 MYOCDQ8IZQ8 938 aa17.17■□□□□ 0.34
LINC01089-209ENST00000542933 LINC00301Q8NCQ3 95 aa17.17■□□□□ 0.34
LINC01089-209ENST00000542933 CALML4Q96GE6 196 aa17.17■□□□□ 0.34
LINC01089-209ENST00000542933 FDXACB1Q9BRP7 624 aaPredicted RBP17.17■□□□□ 0.34
LINC01089-209ENST00000542933 MSRAQ9UJ68 235 aa17.17■□□□□ 0.34
LINC01089-209ENST00000542933 PCDHA11Q9Y5I1 949 aa17.17■□□□□ 0.34
LINC01089-209ENST00000542933 TRANK1O15050 2925 aa17.16■□□□□ 0.34
LINC01089-209ENST00000542933 E9PMD0 336 aa17.16■□□□□ 0.34
LINC01089-209ENST00000542933 GJB5O95377 273 aa17.16■□□□□ 0.34
LINC01089-209ENST00000542933 CYP11B2P19099 503 aa17.16■□□□□ 0.34
LINC01089-209ENST00000542933 SFPQP23246 707 aaKnown RBP eCLIP17.16■□□□□ 0.34
LINC01089-209ENST00000542933 DDIT3P35638 169 aa17.16■□□□□ 0.34
LINC01089-209ENST00000542933 ARL2P36404 184 aa17.16■□□□□ 0.34
LINC01089-209ENST00000542933 GRB10Q13322 594 aa17.16■□□□□ 0.34
LINC01089-209ENST00000542933 TFDP1Q14186 410 aa17.16■□□□□ 0.34
LINC01089-209ENST00000542933 KCNK18Q7Z418 384 aa17.16■□□□□ 0.34
LINC01089-209ENST00000542933 KRI1Q8N9T8 703 aaKnown RBP17.16■□□□□ 0.34
LINC01089-209ENST00000542933 LINC01599Q8WXQ3 324 aa17.16■□□□□ 0.34
LINC01089-209ENST00000542933 PNMA5Q96PV4 448 aa17.16■□□□□ 0.34
LINC01089-209ENST00000542933 CCSER1Q9C0I3 900 aa17.16■□□□□ 0.34
LINC01089-209ENST00000542933 CSRNP2Q9H175 543 aa17.16■□□□□ 0.34
LINC01089-209ENST00000542933 POLR3FQ9H1D9 316 aaPredicted RBP17.16■□□□□ 0.34
LINC01089-209ENST00000542933 TSPYL2Q9H2G4 693 aaPredicted RBP17.16■□□□□ 0.34
LINC01089-209ENST00000542933 TMX1Q9H3N1 280 aa17.16■□□□□ 0.34
LINC01089-209ENST00000542933 ENPP3O14638 875 aa17.15■□□□□ 0.34
LINC01089-209ENST00000542933 SPTLC2O15270 562 aa17.15■□□□□ 0.34
LINC01089-209ENST00000542933 TLL1O43897 1013 aa17.15■□□□□ 0.34
LINC01089-209ENST00000542933 PPP6R2O75170 966 aa17.15■□□□□ 0.34
LINC01089-209ENST00000542933 SRGAP2CP0DJJ0 459 aa17.15■□□□□ 0.34
LINC01089-209ENST00000542933 TXLNAP40222 546 aa17.15■□□□□ 0.34
LINC01089-209ENST00000542933 PBX2P40425 430 aa17.15■□□□□ 0.34
LINC01089-209ENST00000542933 PHKA2P46019 1235 aa17.15■□□□□ 0.34
LINC01089-209ENST00000542933 RABGGTBP53611 331 aa17.15■□□□□ 0.34
LINC01089-209ENST00000542933 POU5F1BQ06416 359 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms