RNA–Protein interactions for RNA: ENST00000539552.1

AC055720.1-201, humanhuman

TSL 5 BASIC

Gene AC055720.1, Length 475 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055720.1-201ENST00000539552 GALEQ14376 348 aa4.52□□□□□ -1.69
AC055720.1-201ENST00000539552 RGL3Q3MIN7 710 aa4.52□□□□□ -1.69
AC055720.1-201ENST00000539552 CCDC92Q53HC0 331 aaPredicted RBP4.52□□□□□ -1.69
AC055720.1-201ENST00000539552 CDCP2Q5VXM1 449 aa4.52□□□□□ -1.69
AC055720.1-201ENST00000539552 FOXB2Q5VYV0 432 aa4.52□□□□□ -1.69
AC055720.1-201ENST00000539552 POMZP3Q6PJE2 187 aa4.52□□□□□ -1.69
AC055720.1-201ENST00000539552 C16orf54Q6UWD8 224 aa4.52□□□□□ -1.69
AC055720.1-201ENST00000539552 DTWD2Q8NBA8 298 aa4.52□□□□□ -1.69
AC055720.1-201ENST00000539552 IL17REQ8NFR9 667 aa4.52□□□□□ -1.69
AC055720.1-201ENST00000539552 CLIP3Q96DZ5 547 aa4.52□□□□□ -1.69
AC055720.1-201ENST00000539552 EXOC2Q96KP1 924 aa4.52□□□□□ -1.69
AC055720.1-201ENST00000539552 Q96M66 194 aa4.52□□□□□ -1.69
AC055720.1-201ENST00000539552 RASSF1Q9NS23 344 aa4.52□□□□□ -1.69
AC055720.1-201ENST00000539552 ZNF214Q9UL59 606 aaPredicted RBP4.52□□□□□ -1.69
AC055720.1-201ENST00000539552 TRPC5Q9UL62 973 aaPredicted RBP4.52□□□□□ -1.69
AC055720.1-201ENST00000539552 CEP131Q9UPN4 1083 aa4.52□□□□□ -1.69
AC055720.1-201ENST00000539552 DMTF1Q9Y222 760 aa4.52□□□□□ -1.69
AC055720.1-201ENST00000539552 FAM50BQ9Y247 325 aa4.52□□□□□ -1.69
AC055720.1-201ENST00000539552 ANKRD6Q9Y2G4 727 aa4.52□□□□□ -1.69
AC055720.1-201ENST00000539552 RANBP2P49792 3224 aaKnown RBP4.52□□□□□ -1.69
AC055720.1-201ENST00000539552 ZFHX4Q86UP3 3567 aa4.52□□□□□ -1.69
AC055720.1-201ENST00000539552 UGGT2Q9NYU1 1516 aa4.51□□□□□ -1.69
AC055720.1-201ENST00000539552 SETXQ7Z333 2677 aaKnown RBP4.51□□□□□ -1.69
AC055720.1-201ENST00000539552 BRCA2P51587 3418 aa4.51□□□□□ -1.69
AC055720.1-201ENST00000539552 PRICKLE3O43900 615 aaPredicted RBP4.51□□□□□ -1.69
AC055720.1-201ENST00000539552 OPA1O60313 960 aa4.51□□□□□ -1.69
AC055720.1-201ENST00000539552 CLEC3AO75596 197 aa4.51□□□□□ -1.69
AC055720.1-201ENST00000539552 TGFB3P10600 412 aa4.51□□□□□ -1.69
AC055720.1-201ENST00000539552 SLC5A1P13866 664 aa4.51□□□□□ -1.69
AC055720.1-201ENST00000539552 TNFRSF1AP19438 455 aa4.51□□□□□ -1.69
AC055720.1-201ENST00000539552 TNFAIP3P21580 790 aa4.51□□□□□ -1.69
AC055720.1-201ENST00000539552 CYP2C19P33261 490 aa4.51□□□□□ -1.69
AC055720.1-201ENST00000539552 RXRGP48443 463 aa4.51□□□□□ -1.69
AC055720.1-201ENST00000539552 AK2P54819 239 aa4.51□□□□□ -1.69
AC055720.1-201ENST00000539552 TMPRSS15P98073 1019 aa4.51□□□□□ -1.69
AC055720.1-201ENST00000539552 NUCB1Q02818 461 aa4.51□□□□□ -1.69
AC055720.1-201ENST00000539552 PTPN11Q06124 597 aaPredicted RBP4.51□□□□□ -1.69
AC055720.1-201ENST00000539552 WDR45BQ5MNZ6 344 aa4.51□□□□□ -1.69
AC055720.1-201ENST00000539552 TMEM240Q5SV17 173 aa4.51□□□□□ -1.69
AC055720.1-201ENST00000539552 XRRA1Q6P2D8 792 aa4.51□□□□□ -1.69
AC055720.1-201ENST00000539552 PKN3Q6P5Z2 889 aa4.51□□□□□ -1.69
AC055720.1-201ENST00000539552 NSMFQ6X4W1 530 aa4.51□□□□□ -1.69
AC055720.1-201ENST00000539552 CEP128Q6ZU80 1094 aa4.51□□□□□ -1.69
AC055720.1-201ENST00000539552 RSRC2Q7L4I2 434 aaKnown RBP4.51□□□□□ -1.69
AC055720.1-201ENST00000539552 EPM2AIP1Q7L775 607 aaPredicted RBP4.51□□□□□ -1.69
AC055720.1-201ENST00000539552 NLRX1Q86UT6 975 aa4.51□□□□□ -1.69
AC055720.1-201ENST00000539552 MRPL41Q8IXM3 137 aaKnown RBP4.51□□□□□ -1.69
AC055720.1-201ENST00000539552 CCDC144CPQ8IYA2 1237 aa4.51□□□□□ -1.69
AC055720.1-201ENST00000539552 KIAA1958Q8N8K9 716 aa4.51□□□□□ -1.69
AC055720.1-201ENST00000539552 GIMAP8Q8ND71 665 aaPredicted RBP4.51□□□□□ -1.69
AC055720.1-201ENST00000539552 TMEM87BQ96K49 555 aa4.51□□□□□ -1.69
AC055720.1-201ENST00000539552 SORCS2Q96PQ0 1159 aa4.51□□□□□ -1.69
AC055720.1-201ENST00000539552 SLC9A7Q96T83 725 aa4.51□□□□□ -1.69
AC055720.1-201ENST00000539552 TTC1Q99614 292 aa4.51□□□□□ -1.69
AC055720.1-201ENST00000539552 MENTQ9BUN1 341 aa4.51□□□□□ -1.69
AC055720.1-201ENST00000539552 SLC13A1Q9BZW2 595 aa4.51□□□□□ -1.69
AC055720.1-201ENST00000539552 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.51□□□□□ -1.69
AC055720.1-201ENST00000539552 FAM86C1Q9NVL1 165 aa4.51□□□□□ -1.69
AC055720.1-201ENST00000539552 SMPD4Q9NXE4 827 aa4.51□□□□□ -1.69
AC055720.1-201ENST00000539552 APOBEC2Q9Y235 224 aaKnown RBP4.51□□□□□ -1.69
AC055720.1-201ENST00000539552 CORINQ9Y5Q5 1042 aa4.51□□□□□ -1.69
AC055720.1-201ENST00000539552 CACNA1GO43497 2377 aa4.51□□□□□ -1.69
AC055720.1-201ENST00000539552 SETD5Q9C0A6 1442 aa4.51□□□□□ -1.69
AC055720.1-201ENST00000539552 PRDM15P57071 1507 aaPredicted RBP4.51□□□□□ -1.69
AC055720.1-201ENST00000539552 WASHC2AQ641Q2 1341 aa4.5□□□□□ -1.69
AC055720.1-201ENST00000539552 FRMPD2Q68DX3 1309 aaPredicted RBP4.5□□□□□ -1.69
AC055720.1-201ENST00000539552 LTBP3Q9NS15 1303 aa4.5□□□□□ -1.69
AC055720.1-201ENST00000539552 TRANK1O15050 2925 aa4.5□□□□□ -1.69
AC055720.1-201ENST00000539552 ADGRB2O60241 1585 aa4.5□□□□□ -1.69
AC055720.1-201ENST00000539552 SAMD9LQ8IVG5 1584 aa4.5□□□□□ -1.69
AC055720.1-201ENST00000539552 B4E1Z4 1266 aa4.5□□□□□ -1.69
AC055720.1-201ENST00000539552 F5H423 210 aaPredicted RBP4.5□□□□□ -1.69
AC055720.1-201ENST00000539552 J3KRW8 73 aa4.5□□□□□ -1.69
AC055720.1-201ENST00000539552 K7ESF4 209 aa4.5□□□□□ -1.69
AC055720.1-201ENST00000539552 GFRA2O00451 464 aa4.5□□□□□ -1.69
AC055720.1-201ENST00000539552 PRODHO43272 600 aa4.5□□□□□ -1.69
AC055720.1-201ENST00000539552 BUB1BO60566 1050 aaPredicted RBP4.5□□□□□ -1.69
AC055720.1-201ENST00000539552 USP2O75604 605 aaPredicted RBP4.5□□□□□ -1.69
AC055720.1-201ENST00000539552 DNAJC8O75937 253 aaPredicted RBP4.5□□□□□ -1.69
AC055720.1-201ENST00000539552 SNUPNO95149 360 aaKnown RBP4.5□□□□□ -1.69
AC055720.1-201ENST00000539552 AGR2O95994 175 aa4.5□□□□□ -1.69
AC055720.1-201ENST00000539552 TP53P04637 393 aaPredicted RBP4.5□□□□□ -1.69
AC055720.1-201ENST00000539552 FAM200BP0CF97 657 aa4.5□□□□□ -1.69
AC055720.1-201ENST00000539552 PF4V1P10720 104 aa4.5□□□□□ -1.69
AC055720.1-201ENST00000539552 NAT1P18440 290 aa4.5□□□□□ -1.69
AC055720.1-201ENST00000539552 LPOP22079 712 aaPredicted RBP4.5□□□□□ -1.69
AC055720.1-201ENST00000539552 CCND1P24385 295 aa4.5□□□□□ -1.69
AC055720.1-201ENST00000539552 ECE1P42892 770 aa4.5□□□□□ -1.69
AC055720.1-201ENST00000539552 CDR1P51861 262 aa4.5□□□□□ -1.69
AC055720.1-201ENST00000539552 PMS1P54277 932 aaKnown RBP4.5□□□□□ -1.69
AC055720.1-201ENST00000539552 RBM10P98175 930 aaKnown RBP4.5□□□□□ -1.69
AC055720.1-201ENST00000539552 TAF11Q15544 211 aa4.5□□□□□ -1.69
AC055720.1-201ENST00000539552 ZYXQ15942 572 aaKnown RBP4.5□□□□□ -1.69
AC055720.1-201ENST00000539552 PTPN21Q16825 1174 aa4.5□□□□□ -1.69
AC055720.1-201ENST00000539552 ARHGAP29Q52LW3 1261 aa4.5□□□□□ -1.69
AC055720.1-201ENST00000539552 FAM209AQ5JX71 171 aa4.5□□□□□ -1.69
AC055720.1-201ENST00000539552 TMEM201Q5SNT2 666 aa4.5□□□□□ -1.69
AC055720.1-201ENST00000539552 USP51Q70EK9 711 aa4.5□□□□□ -1.69
AC055720.1-201ENST00000539552 TMC6Q7Z403 805 aa4.5□□□□□ -1.69
AC055720.1-201ENST00000539552 SRLQ86TD4 932 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms