RNA–Protein interactions for RNA: ENST00000539522.2

CCDC42-202, Transcript of coiled-coil domain containing 42, humanhuman

TSL 1 (best) BASIC

Gene CCDC42, Length 1,087 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-202ENST00000539522 GPC3P51654 580 aa14.45□□□□□ -0.1
CCDC42-202ENST00000539522 POLGP54098 1239 aaPredicted RBP14.45□□□□□ -0.1
CCDC42-202ENST00000539522 UBE2HP62256 183 aa14.45□□□□□ -0.1
CCDC42-202ENST00000539522 MRPS6P82932 125 aaKnown RBP14.45□□□□□ -0.1
CCDC42-202ENST00000539522 CACNB1Q02641 598 aaPredicted RBP14.45□□□□□ -0.1
CCDC42-202ENST00000539522 SNW1Q13573 536 aaKnown RBP14.45□□□□□ -0.1
CCDC42-202ENST00000539522 LONRF3Q496Y0 759 aa14.45□□□□□ -0.1
CCDC42-202ENST00000539522 TPRNQ4KMQ1 711 aa14.45□□□□□ -0.1
CCDC42-202ENST00000539522 MFSD5Q6N075 450 aa14.45□□□□□ -0.1
CCDC42-202ENST00000539522 LRRC8DQ7L1W4 858 aa14.45□□□□□ -0.1
CCDC42-202ENST00000539522 MAEAQ7L5Y9 396 aa14.45□□□□□ -0.1
CCDC42-202ENST00000539522 METTL13Q8N6R0 699 aa14.45□□□□□ -0.1
CCDC42-202ENST00000539522 CAGE1Q8TC20 777 aa14.45□□□□□ -0.1
CCDC42-202ENST00000539522 PRPF31Q8WWY3 499 aaKnown RBP14.45□□□□□ -0.1
CCDC42-202ENST00000539522 STAMQ92783 540 aa14.45□□□□□ -0.1
CCDC42-202ENST00000539522 CALML4Q96GE6 196 aa14.45□□□□□ -0.1
CCDC42-202ENST00000539522 AGO3Q9H9G7 860 aaKnown RBP14.45□□□□□ -0.1
CCDC42-202ENST00000539522 KCNH3Q9ULD8 1083 aa14.45□□□□□ -0.1
CCDC42-202ENST00000539522 NOD1Q9Y239 953 aa14.45□□□□□ -0.1
CCDC42-202ENST00000539522 CDY2AQ9Y6F7 541 aa14.45□□□□□ -0.1
CCDC42-202ENST00000539522 PDE4DIPQ5VU43 2346 aa14.44□□□□□ -0.1
CCDC42-202ENST00000539522 ADGRA3Q8IWK6 1321 aa14.44□□□□□ -0.1
CCDC42-202ENST00000539522 ARHGEF35A5YM69 484 aa14.44□□□□□ -0.1
CCDC42-202ENST00000539522 CSF2RAP15509 400 aa14.44□□□□□ -0.1
CCDC42-202ENST00000539522 SELPP16109 830 aa14.44□□□□□ -0.1
CCDC42-202ENST00000539522 LIG1P18858 919 aa14.44□□□□□ -0.1
CCDC42-202ENST00000539522 CASP1P29466 404 aa14.44□□□□□ -0.1
CCDC42-202ENST00000539522 MLLT1Q03111 559 aaPredicted RBP14.44□□□□□ -0.1
CCDC42-202ENST00000539522 CAPSQ13938 189 aa14.44□□□□□ -0.1
CCDC42-202ENST00000539522 LPIN1Q14693 890 aa14.44□□□□□ -0.1
CCDC42-202ENST00000539522 KIZQ2M2Z5 673 aa14.44□□□□□ -0.1
CCDC42-202ENST00000539522 RRAGBQ5VZM2 374 aa14.44□□□□□ -0.1
CCDC42-202ENST00000539522 GRAMD1CQ8IYS0 662 aa14.44□□□□□ -0.1
CCDC42-202ENST00000539522 FMR1NBQ8N0W7 255 aaPredicted RBP14.44□□□□□ -0.1
CCDC42-202ENST00000539522 KCTD17Q8N5Z5 321 aa14.44□□□□□ -0.1
CCDC42-202ENST00000539522 FSIP1Q8NA03 581 aa14.44□□□□□ -0.1
CCDC42-202ENST00000539522 LARP4BQ92615 738 aaKnown RBP14.44□□□□□ -0.1
CCDC42-202ENST00000539522 DHX58Q96C10 678 aa14.44□□□□□ -0.1
CCDC42-202ENST00000539522 DNAJC19Q96DA6 116 aa14.44□□□□□ -0.1
CCDC42-202ENST00000539522 MINDY3Q9H8M7 445 aa14.44□□□□□ -0.1
CCDC42-202ENST00000539522 ATP6V0A4Q9HBG4 840 aa14.44□□□□□ -0.1
CCDC42-202ENST00000539522 IFT122Q9HBG6 1241 aa14.44□□□□□ -0.1
CCDC42-202ENST00000539522 KBTBD4Q9NVX7 518 aa14.44□□□□□ -0.1
CCDC42-202ENST00000539522 SUCLA2Q9P2R7 463 aaPredicted RBP14.44□□□□□ -0.1
CCDC42-202ENST00000539522 STK17AQ9UEE5 414 aa14.44□□□□□ -0.1
CCDC42-202ENST00000539522 SERTAD1Q9UHV2 236 aa14.44□□□□□ -0.1
CCDC42-202ENST00000539522 CEP290O15078 2479 aa14.44□□□□□ -0.1
CCDC42-202ENST00000539522 LAMA3Q16787 3333 aa14.44□□□□□ -0.1
CCDC42-202ENST00000539522 CAND2O75155 1236 aa14.43□□□□□ -0.1
CCDC42-202ENST00000539522 CSDE1O75534 798 aaKnown RBP14.43□□□□□ -0.1
CCDC42-202ENST00000539522 CXCL10P02778 98 aa14.43□□□□□ -0.1
CCDC42-202ENST00000539522 EDN1P05305 212 aa14.43□□□□□ -0.1
CCDC42-202ENST00000539522 RAG1P15918 1043 aa14.43□□□□□ -0.1
CCDC42-202ENST00000539522 GUCY2CP25092 1073 aa14.43□□□□□ -0.1
CCDC42-202ENST00000539522 MAGEA10P43363 369 aaPredicted RBP14.43□□□□□ -0.1
CCDC42-202ENST00000539522 NLRP11P59045 1033 aaKnown RBP14.43□□□□□ -0.1
CCDC42-202ENST00000539522 MDM2Q00987 491 aaPredicted RBP14.43□□□□□ -0.1
CCDC42-202ENST00000539522 RAD51AP2Q09MP3 1159 aa14.43□□□□□ -0.1
CCDC42-202ENST00000539522 LAMTOR4Q0VGL1 99 aa14.43□□□□□ -0.1
CCDC42-202ENST00000539522 GIT2Q14161 759 aa14.43□□□□□ -0.1
CCDC42-202ENST00000539522 DHX8Q14562 1220 aaKnown RBP14.43□□□□□ -0.1
CCDC42-202ENST00000539522 KLHL40Q2TBA0 621 aa14.43□□□□□ -0.1
CCDC42-202ENST00000539522 FBXO47Q5MNV8 452 aa14.43□□□□□ -0.1
CCDC42-202ENST00000539522 SLC7A3Q8WY07 619 aa14.43□□□□□ -0.1
CCDC42-202ENST00000539522 MRPS27Q92552 414 aaKnown RBP14.43□□□□□ -0.1
CCDC42-202ENST00000539522 CDK5RAP3Q96JB5 506 aa14.43□□□□□ -0.1
CCDC42-202ENST00000539522 FIZ1Q96SL8 496 aa14.43□□□□□ -0.1
CCDC42-202ENST00000539522 OSMRQ99650 979 aa14.43□□□□□ -0.1
CCDC42-202ENST00000539522 REEP2Q9BRK0 252 aa14.43□□□□□ -0.1
CCDC42-202ENST00000539522 CELF4Q9BZC1 486 aaKnown RBP14.43□□□□□ -0.1
CCDC42-202ENST00000539522 POLR3FQ9H1D9 316 aaPredicted RBP14.43□□□□□ -0.1
CCDC42-202ENST00000539522 PRO3102Q9H379 93 aa14.43□□□□□ -0.1
CCDC42-202ENST00000539522 CCDC39Q9UFE4 941 aa14.43□□□□□ -0.1
CCDC42-202ENST00000539522 MICAL3Q7RTP6 2002 aa14.42□□□□□ -0.1
CCDC42-202ENST00000539522 A0A087WZ62 844 aa14.42□□□□□ -0.1
CCDC42-202ENST00000539522 SFI1A8K8P3 1242 aa14.42□□□□□ -0.1
CCDC42-202ENST00000539522 HIP1RO75146 1068 aa14.42□□□□□ -0.1
CCDC42-202ENST00000539522 STAT6P42226 847 aa14.42□□□□□ -0.1
CCDC42-202ENST00000539522 BFSP2Q13515 415 aa14.42□□□□□ -0.1
CCDC42-202ENST00000539522 IER5Q5VY09 327 aa14.42□□□□□ -0.1
CCDC42-202ENST00000539522 CCDC73Q6ZRK6 1079 aa14.42□□□□□ -0.1
CCDC42-202ENST00000539522 GPBP1Q86WP2 473 aa14.42□□□□□ -0.1
CCDC42-202ENST00000539522 RHPN2Q8IUC4 686 aa14.42□□□□□ -0.1
CCDC42-202ENST00000539522 NME8Q8N427 588 aa14.42□□□□□ -0.1
CCDC42-202ENST00000539522 RETREG2Q8NC44 543 aa14.42□□□□□ -0.1
CCDC42-202ENST00000539522 GDF15Q99988 308 aa14.42□□□□□ -0.1
CCDC42-202ENST00000539522 FDXACB1Q9BRP7 624 aaPredicted RBP14.42□□□□□ -0.1
CCDC42-202ENST00000539522 AKT3Q9Y243 479 aa14.42□□□□□ -0.1
CCDC42-202ENST00000539522 NOC2LQ9Y3T9 749 aaKnown RBP14.42□□□□□ -0.1
CCDC42-202ENST00000539522 COL4A3BPQ9Y5P4 624 aa14.42□□□□□ -0.1
CCDC42-202ENST00000539522 TRPV2Q9Y5S1 764 aa14.42□□□□□ -0.1
CCDC42-202ENST00000539522 COL4A6Q14031 1691 aa14.42□□□□□ -0.1
CCDC42-202ENST00000539522 TTLL13PA6NNM8 815 aa14.41□□□□□ -0.1
CCDC42-202ENST00000539522 NR1I2O75469 434 aa14.41□□□□□ -0.1
CCDC42-202ENST00000539522 SSBP05455 408 aaKnown RBP eCLIP14.41□□□□□ -0.1
CCDC42-202ENST00000539522 PRR29P0C7W0 189 aa14.41□□□□□ -0.1
CCDC42-202ENST00000539522 ACRP10323 421 aa14.41□□□□□ -0.1
CCDC42-202ENST00000539522 FGFR4P22455 802 aa14.41□□□□□ -0.1
CCDC42-202ENST00000539522 TXLNAP40222 546 aa14.41□□□□□ -0.1
CCDC42-202ENST00000539522 ZNF131P52739 623 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms